Basic Information

Insect: Melanotus villosus
Gene Symbol: -
Assembly: GCA_963082815.1
Location: OY720421.1:25887459-25889292[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 3.5e-06 0.0008 22.1 1.8 1 23 250 272 250 272 0.98

2 11 0.00019 0.044 16.7 7.7 1 23 278 300 278 300 0.98

3 11 0.00013 0.029 17.2 0.7 1 23 306 328 306 328 0.97

4 11 1.3e-05 0.0029 20.4 5.4 1 23 334 356 334 356 0.98

5 11 0.00078 0.18 14.8 0.2 1 23 362 384 362 384 0.97

6 11 7.6e-05 0.017 17.9 3.7 1 23 390 412 390 412 0.98

7 11 2.7e-06 0.00061 22.5 2.7 1 23 418 440 418 440 0.98

8 11 1.6e-05 0.0037 20.0 1.9 1 23 446 468 446 468 0.98

9 11 1.1e-06 0.00025 23.7 2.5 1 23 474 496 474 496 0.99

10 11 1.2e-06 0.00028 23.6 3.9 1 23 502 524 502 524 0.98

11 11 5.4e-06 0.0012 21.6 2.7 1 23 530 552 530 552 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	3.5e-06	0.0008	22.1	1.8	1	23	250	272	250	272	0.98
2	11	0.00019	0.044	16.7	7.7	1	23	278	300	278	300	0.98
3	11	0.00013	0.029	17.2	0.7	1	23	306	328	306	328	0.97
4	11	1.3e-05	0.0029	20.4	5.4	1	23	334	356	334	356	0.98
5	11	0.00078	0.18	14.8	0.2	1	23	362	384	362	384	0.97
6	11	7.6e-05	0.017	17.9	3.7	1	23	390	412	390	412	0.98
7	11	2.7e-06	0.00061	22.5	2.7	1	23	418	440	418	440	0.98
8	11	1.6e-05	0.0037	20.0	1.9	1	23	446	468	446	468	0.98
9	11	1.1e-06	0.00025	23.7	2.5	1	23	474	496	474	496	0.99
10	11	1.2e-06	0.00028	23.6	3.9	1	23	502	524	502	524	0.98
11	11	5.4e-06	0.0012	21.6	2.7	1	23	530	552	530	552	0.96

Sequence Information

Coding Sequence: ATGTATCAGATAACAGAATGTTGCCGAGTGTGTTTACGAATGGAATGTACATTAACTCATACTTCTACAACAGATGGTGATAATATAAGGTTTATTGATAAATTAGCAGCTTCTGTTTCTGATatgactTGGCAAAAAGAAGGATTTCCTTCGCTTATATGTTCTGTTTGCATCGAGAAACTGCGGACTGCTTATGACTTTAGAATATTATGTCTTCAATCTGATAATACTTTACAGCGATATTTAAATCATCACCACGAAGAagctaaacaaaatattaacgaAAGGCCTTTAGCAACACCCACAAAATTCGATTTTGCTATGCAGTCCGATTCGTCCAATAATATGCCCAGTATTAATCAAGAAACACATAATTCGGATTATTTAAGCTTAAGAAGTCTTCTGGATGGTAATGACGATCTCAGTCGAAATCATTATGGTACACAAAACAAAGATTTGCCTACTTTAACTAATTTGCACACGACAATAGGCAATATTCCAATTATTCCTATGTCTATACCATCAACGACACTAGCACTAACGGAAACTTCTGAAAGTATGCCTGCGATGTCGTCAGTTCAAGTGTCGACCACTACTACGACAGCTGCAGTGGAAACTTCAACTAATACAGTATTAAAACCAGTAACAaccacaaaaattacaataagtacaGAAACACAAACACCATATGCTTTAATGACTCAATCAAACGATCCGATTCCCCAACCGAAAACAACACCAAAGCGATATCCCTGTAATATATGTAATAAAGATTACagtaattattcaaatttacgGTCGCATAAGAAAAGTCATTCGGGTGAAAAACCGTTTGAATGTAAATATTGTGATAAAAGGTTTTTGCATCCGCATCATTTGCGTGAACATATACGAAGACATACAggtgaaaaaccgtttgcctgtagtCTTTGTAACAAACGTTTTACTATAAGAGGTGAGGTAACGATGCATATGAGGTCTCATACGGGAGAGAAACCATATGCTTGTACATTCTGTGATAAAAAGTGTTCAACTCATTCTGACTTAAAAGTTCATATTAGGACCCATACAGGTGAAAAACCGTTCGATTGTATGATATGTGGTAAAAAGTTTGCAAGTGCATATATTTTGAATGCTCATAATAAAACGCACACCGGAGAAAAACCATACAATTGTAATATATGTTGTAAAAGCTTTGCGCAGTCTTCGCAATTAACCGTTCACTTCCGTACTCATACAGGTGAAAAACCATACATTTGCAAACATTGTGATCAGAGATTTACTCGAAATACTGAGTTAACAATTCATTTGCGAGAACATACCGGAAAAGTTCCTTATTCCTGTAGCGTTTGTAATCGAGGTTTCGTATATCAGTCTCATTACCAAGCACATATGGTTAAGCATTCAGGAGAGAAACCGTATAAATGCGTTACATGTGATAAGAAATTTACAACAGCGTCATATCTTCAGGAACATACTAGGAAACATACtgggcaaaaattattttcttgtatgCATTGCGATAAAACATTTACTCGTGCTGcgtttttacaaaaacatataCGAAAGCATACGGGTGAAAAACCGTATTTATGTAGTATTTGCAATAAGAGGTTTTCatcttcaaattatttaagtacTCATATGAAGAAACATGCAGCACCACAGCAGCCGCCTATTAATAATGCAAATATGCAAAATACTATTATGCAGtag
Protein Sequence: MYQITECCRVCLRMECTLTHTSTTDGDNIRFIDKLAASVSDMTWQKEGFPSLICSVCIEKLRTAYDFRILCLQSDNTLQRYLNHHHEEAKQNINERPLATPTKFDFAMQSDSSNNMPSINQETHNSDYLSLRSLLDGNDDLSRNHYGTQNKDLPTLTNLHTTIGNIPIIPMSIPSTTLALTETSESMPAMSSVQVSTTTTTAAVETSTNTVLKPVTTTKITISTETQTPYALMTQSNDPIPQPKTTPKRYPCNICNKDYSNYSNLRSHKKSHSGEKPFECKYCDKRFLHPHHLREHIRRHTGEKPFACSLCNKRFTIRGEVTMHMRSHTGEKPYACTFCDKKCSTHSDLKVHIRTHTGEKPFDCMICGKKFASAYILNAHNKTHTGEKPYNCNICCKSFAQSSQLTVHFRTHTGEKPYICKHCDQRFTRNTELTIHLREHTGKVPYSCSVCNRGFVYQSHYQAHMVKHSGEKPYKCVTCDKKFTTASYLQEHTRKHTGQKLFSCMHCDKTFTRAAFLQKHIRKHTGEKPYLCSICNKRFSSSNYLSTHMKKHAAPQQPPINNANMQNTIMQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00789553; iTF_00399763;
90% Identity: -
80% Identity: -