Basic Information

Insect: Melanotus villosus
Gene Symbol: -
Assembly: GCA_963082815.1
Location: OY720420.1:87570770-87572374[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0027 0.62 13.1 4.1 3 23 190 210 188 210 0.96

2 11 1.1e-06 0.00025 23.7 2.7 1 23 216 238 216 238 0.99

3 11 2.2e-06 0.0005 22.8 0.8 1 23 244 266 244 266 0.97

4 11 6.6e-07 0.00015 24.4 2.3 1 23 272 295 272 295 0.98

5 11 7.3e-07 0.00016 24.3 0.3 1 23 301 323 301 323 0.98

6 11 4.7e-05 0.011 18.6 0.7 1 23 329 352 329 352 0.96

7 11 9.5e-05 0.021 17.7 0.8 1 23 358 380 358 380 0.98

8 11 8.7e-05 0.02 17.8 2.5 1 23 389 412 389 412 0.97

9 11 7.6e-08 1.7e-05 27.4 0.8 1 23 418 440 418 440 0.98

10 11 2.6e-05 0.0058 19.4 0.6 1 23 446 468 446 468 0.97

11 11 4e-06 0.0009 22.0 0.4 1 23 474 496 474 496 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0027	0.62	13.1	4.1	3	23	190	210	188	210	0.96
2	11	1.1e-06	0.00025	23.7	2.7	1	23	216	238	216	238	0.99
3	11	2.2e-06	0.0005	22.8	0.8	1	23	244	266	244	266	0.97
4	11	6.6e-07	0.00015	24.4	2.3	1	23	272	295	272	295	0.98
5	11	7.3e-07	0.00016	24.3	0.3	1	23	301	323	301	323	0.98
6	11	4.7e-05	0.011	18.6	0.7	1	23	329	352	329	352	0.96
7	11	9.5e-05	0.021	17.7	0.8	1	23	358	380	358	380	0.98
8	11	8.7e-05	0.02	17.8	2.5	1	23	389	412	389	412	0.97
9	11	7.6e-08	1.7e-05	27.4	0.8	1	23	418	440	418	440	0.98
10	11	2.6e-05	0.0058	19.4	0.6	1	23	446	468	446	468	0.97
11	11	4e-06	0.0009	22.0	0.4	1	23	474	496	474	496	0.99

Sequence Information

Coding Sequence: ATGGAATCTTTTCGTAAATATGAGCATTTACAAATCGAAGAAGTTTGTCGAATTTGCTTAGCAAAAAGGGAACAAATGAGTCTAATTTCTGAAGCTGGTTTAGCCGATATGTTATTAGAATGTGCTTCGATACAGGTATCCGAAGAAGATGGACTGTATTTAGTCTGTAGTCACTGCACAAATGAAGTTAGTCGGTGgtatgtttttaaacaacagGTTGTTAAGAGTTTTGAAATTGGCCGATGGTTAATAAAGCAAAGACAACAAAAAACAGCGATCGTAAATGATTTTACATCTGCAGACATAGTCGCAAGCGAAGATGATTCTAGTTTATCGAGTAAAATGGAAATCGATGATAAATCTTGTATGAGCATGACCGATGAAAGTTTAAACAAGTTAATAAACGATTCTAGCTCAATAAACCTTGAAATAGGAGAAGCTAAGtcagatttaattaatactaatgTAAATTTAGATACTAATAAATTGTCTGCAGATACAACAAGTCTAAATGAAGTACAAGAGCAACAGAAATCAAACGAAAAAATTAGTGAGGAATTTATAATATGTGAGCAATGTGGAAAACAATGTGCAAACGCTAATGCATTACATAGACATCACAAAAGTCATAGTACTAATAAAATTTACGAATGTACAAAATGTACCAAAGTATTTAAACAATCACAGACGTTATCTGATCACATGCGACGACACTACGATTCACGTAATTTTGCGTGCGACATTTGTggtaaaaaattttataaacaatttaatgttACTGAACATATGAGAATTCACACTGGAGAACGACCGTTTAAATGCGAACATTGTGGCCGAACCTTTACAAGAGCGTTATTACTAAGAAATCATATTAAAAAGgcCCATACAGGAGAAAAAAGATATATTTGCGAAGTATGTTCGAAAAGTTTCGTCGATGGTTATCAGTTAAAAATACATATGCGAacgcatacaggagaaaaaccctTCCAATGTGATCAATGTGAGAAAGCATTTGCGATGCAAGGCCAGCTAAAATCTCACGTTAAATATAAGCACACATACGAAAAAGACTTCATTTGTAACGTGTGTGCTCGAGCTTTTACCGCGAAACATACCCTCGAAGAACATTTACGTACACATACCGGGGAAAAAAGAGAGCCCAGACACGTATGTAGTATATGtggaaaaaaatgtataacaacAACTCAACTAAAAATTCATGTCCGATCCGCTCACACCGGTGAACGACCATTTTCATGCCAGGTTTGTGGTAAACGATTTGTTACAAGAACAGCTTTAGAATCACATATGAGAACTCATTCGGGAGAAAAGTCATTTATTTGCTGCGACTGTGGGAAAGCATTCGGGGCGAAATCTAGTTTAAAAATCCACGAAAGAATTCATACAGGAGAACGACCTTATAAATGTGAAGCATGCGGCAAGACTTTTGCGCAAGGAAGCACGTTAAAAACTCATTTGAAAATCCACGGACAATAA
Protein Sequence: MESFRKYEHLQIEEVCRICLAKREQMSLISEAGLADMLLECASIQVSEEDGLYLVCSHCTNEVSRWYVFKQQVVKSFEIGRWLIKQRQQKTAIVNDFTSADIVASEDDSSLSSKMEIDDKSCMSMTDESLNKLINDSSSINLEIGEAKSDLINTNVNLDTNKLSADTTSLNEVQEQQKSNEKISEEFIICEQCGKQCANANALHRHHKSHSTNKIYECTKCTKVFKQSQTLSDHMRRHYDSRNFACDICGKKFYKQFNVTEHMRIHTGERPFKCEHCGRTFTRALLLRNHIKKAHTGEKRYICEVCSKSFVDGYQLKIHMRTHTGEKPFQCDQCEKAFAMQGQLKSHVKYKHTYEKDFICNVCARAFTAKHTLEEHLRTHTGEKREPRHVCSICGKKCITTTQLKIHVRSAHTGERPFSCQVCGKRFVTRTALESHMRTHSGEKSFICCDCGKAFGAKSSLKIHERIHTGERPYKCEACGKTFAQGSTLKTHLKIHGQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00399760;
90% Identity: -
80% Identity: -