Basic Information

Insect: Melanotus villosus
Gene Symbol: -
Assembly: GCA_963082815.1
Location: OY720425.1:48467072-48487010[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 8.2e-06 0.0018 21.0 0.7 1 23 221 243 221 243 0.98

2 19 0.13 29 7.8 0.1 1 16 249 264 249 266 0.89

3 19 0.21 47 7.1 2.9 1 23 334 358 334 358 0.95

4 19 1.4e-05 0.0031 20.3 2.2 1 23 514 537 514 537 0.98

5 19 0.0059 1.3 12.0 0.3 2 23 551 573 550 573 0.96

6 19 0.0056 1.3 12.1 0.1 2 20 581 599 581 601 0.94

7 19 0.00015 0.033 17.1 2.1 1 23 689 711 689 711 0.92

8 19 0.0018 0.4 13.6 0.2 1 23 717 739 717 739 0.97

9 19 8.2e-07 0.00018 24.2 2.7 2 23 802 823 801 823 0.97

10 19 0.016 3.6 10.6 3.4 1 20 835 854 835 857 0.92

11 19 0.37 82 6.4 4.7 1 23 863 885 863 885 0.96

12 19 1.2e-05 0.0027 20.5 2.3 1 23 891 913 891 913 0.98

13 19 0.00021 0.046 16.6 0.1 3 23 921 942 919 942 0.91

14 19 0.016 3.7 10.6 0.6 3 23 948 968 946 968 0.98

15 19 7.8e-05 0.018 17.9 4.1 1 23 977 999 977 999 0.97

16 19 0.00047 0.11 15.5 0.1 2 23 1006 1027 1005 1027 0.96

17 19 2.4e-06 0.00054 22.7 2.1 1 23 1033 1055 1033 1055 0.98

18 19 5.1e-05 0.012 18.5 1.1 1 23 1061 1083 1061 1083 0.96

19 19 9.2e-06 0.0021 20.8 0.2 1 23 1089 1112 1089 1112 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	8.2e-06	0.0018	21.0	0.7	1	23	221	243	221	243	0.98
2	19	0.13	29	7.8	0.1	1	16	249	264	249	266	0.89
3	19	0.21	47	7.1	2.9	1	23	334	358	334	358	0.95
4	19	1.4e-05	0.0031	20.3	2.2	1	23	514	537	514	537	0.98
5	19	0.0059	1.3	12.0	0.3	2	23	551	573	550	573	0.96
6	19	0.0056	1.3	12.1	0.1	2	20	581	599	581	601	0.94
7	19	0.00015	0.033	17.1	2.1	1	23	689	711	689	711	0.92
8	19	0.0018	0.4	13.6	0.2	1	23	717	739	717	739	0.97
9	19	8.2e-07	0.00018	24.2	2.7	2	23	802	823	801	823	0.97
10	19	0.016	3.6	10.6	3.4	1	20	835	854	835	857	0.92
11	19	0.37	82	6.4	4.7	1	23	863	885	863	885	0.96
12	19	1.2e-05	0.0027	20.5	2.3	1	23	891	913	891	913	0.98
13	19	0.00021	0.046	16.6	0.1	3	23	921	942	919	942	0.91
14	19	0.016	3.7	10.6	0.6	3	23	948	968	946	968	0.98
15	19	7.8e-05	0.018	17.9	4.1	1	23	977	999	977	999	0.97
16	19	0.00047	0.11	15.5	0.1	2	23	1006	1027	1005	1027	0.96
17	19	2.4e-06	0.00054	22.7	2.1	1	23	1033	1055	1033	1055	0.98
18	19	5.1e-05	0.012	18.5	1.1	1	23	1061	1083	1061	1083	0.96
19	19	9.2e-06	0.0021	20.8	0.2	1	23	1089	1112	1089	1112	0.96

Sequence Information

Coding Sequence: ATGAATGGGGGAGTAACGGAACCAAATTCGTGCGGAAaaaaacatAATCAAGAAGTACGAAAAAACCGTGAAATACTTAAGAGGCTGATAGATGTGGTTTGTTTCCTGGGAGAACATGAACTTTCATTTCGCGGTCATAGTGAAACTGAATATTCTTCAAACAAGGGAAATTACGTagatttagtaaatttattggCCAAGTATGACGAAATTTTACAATCCCATTTAGATAATTCTACAAGATTTAAAGGAACTTCTAATTTGATACAAAACGATCTTATTCTATGCATAGAAAaagtaatattgaaaaaaataaaatatgaaatagacGAAGCCTCTTTTGTTGGTATAATTCTGGACGAAACTACAGATGTGGCAAATATTagtcagttatcaaaagttttgCGTTATGTAACAAAAAAAGGCGAAATTAAGGAACGGTTTAtaggatttttaaatgtttccacGCAAAGAACAGCTTCTGTTTTACATGGTATTATTCAGACCATAGCGAATGATTATAATTGTGGTTCAAAATTAGCAGCTCAAAGCTATGATGGAGCAGTAGTAATGGCAGGTGAATTAGGAGGTCTACAggttaaagtaaaagaaacgTATCCAAGTGCACTTTTTGTACATTTTCATACTGGTGAGAAACGTTACAATTGTGAAATATGCAAAAAGAAATTTACTCAACGAACACCGTTAGTTATTCATATGAGAATACATACAGGAGAAAGACCGTATAAGTGCAATTTATGTGATATGGGTTTTGTTAGACAAGAGGCGTATGTTAATTTATcagatcaaaaattaaatattaaaaatgaagttgAAGTTAAGAGAGAATCGGATCTTACTAGCTCGCAATTGCACTCGCATATAGATTTTGGTATCAGTATTATTCATACAGAAAATCCATCTAATCGAACTACCAAATCGGTTGTTAAATCAGATTCTATGACGACTCCACCTAAAAGAGAAATATCGAAGCAGAAGTTTGAATGTTGTTTATGCAATGGAAAAGTTCTTAGTTCGCAGAGAAGTTATAAGAGACATATGGTAACTTTTCACAGCAAAGTTGCAATTAAGAAAAACTTGGATTTTATTGGACAGGAAGCTTATGTTAATTTATCAGGTCaagaattgaatattaaaaatgaagttgAAGTTAAGAGAGAACCGAATCTTTCTAATTTAACAAATAGGAATGTTAcatcaaaactaaaattcagTGGTGCTGTGAGTTCCAAATTGCAGTGGCAGTTAGCTTCAGGTGTTAACAATACTGGTGCAAAATATCCGAAAAGTAGTTCATCCAATGCATCCACCAGTCGTTTATCAAAATCGGTTGCCACGTTAGATTCCGATGCTACTAAAATGAAAACGTCAGAGCAGAAAATTGAATGTAGAATACAATTAGCTTCCGGTGTTGGCATTACTGCGAAAAGTGGTCCGTCCGATGCATCCACCGGttgttcatcaaaatcggttgtCACAGGTTCTGATGATACTGAAAGGAAAATGCTCGAGGAGAAATTTGAATGTACTCTATGTGCAAAATTCTTcattagaaaaaacaattacaccagaCATATGAAGACCGCTCATGGTGACTTTATTGAAAGGAAAATGCCCGTGCAGAAAATTGAATGTGCTCAATGTGCGGAATTATTcattacaaaaagaaattacagcaAACATATGAAGACCGCTCATAGTGGtgaatacaataaaaatgtgtGTGAATTTTGTGAAGAATCATTTCCACATCCTTCggttttaaaaaaacacattGGCGTGGTATTATCCGTTACAATAATAATAGATTTTGTACTAATATTCAGTTATTTCAGGTTAATTGGTGTCGAAGAGAACTATCTACTCATTACTGAAAGCGCTGAAGCCATTATTGTACCTCAAACTGGTGTTATTGGCATAAACAATTTAAACGTTAATACCAGATCAGTAAATGATGAAATTCCTGAACGTATCACAACTAATACTACAAAGCAATACGTTGTTAGTACAACGGCGAAAACAAGATTTAGATTAAAACAATtacatatttgtaaaatttgtggTAAACATTTTCCTTCGAGTACCAAGCTTAATCGTCATGGTGTGGTTCATAGTAACGAGAGGCCTTATAATTGCCCATTGTGTTCTAAATCATTCAAGCTTCTTGCTCAGGTTCGAGGTCACATGACTGTGCacattaatgaaaatttaaatccagATGCTATCGCCGCAACAGAAACCAATGTGGTAGCCATGCCAAAACCTAATATTGTATCTTCTGTTGCTATTAATCAAGACAAACAAAGTATTATGGATGAGCTAGAATCGAATGCTGGTACTTCTTTAGAAGGCAATGAAAGTATGAAGAAGAACGTGAAGATTACTTGTGAAATCTGTAACAAATCGTTTGCCTATTCGTATCATTTGAAGAAGCATATGACAACACATTGTAGCGAAAATGAAGAAATGTTAATTAGGGTGCATTCTTGTCCAACatgtaaaaaatgttttaattcgaAAGCTAGGCTGTCATTACACCTACCAATTCATAGCGAAGAAAGGCCGTTTATCTGCCACTTCTGCTGTAAATCCTTTAAACAACTTAACGTTCTAAGAACTCACATTGAGGGCCATGTTGGGGATAAACAGTTTAAGTGTAAACAATGCGAAAGAATATTTCGTACAAGAAGTCTTCTAAAGAGTCACGAAAGAATACATTTGGACGCCTCGCCAGTTATATGCGATGTTTGCGGAAAACAGTATAGAAGTAAAGCAAATCTCAAAATTCATTTCGATTCCGCACATAGCAAAAAATACTGGTGTAATGAATGTtcggttaatttaaaaaatgaatccGATTTTATAAAGCATCGTAATACTCATTTCGGTATCGAATCAAGTAAAACTCACACATGCCCAGTATGTCAGAAAAGTTTTTACTTTAATCGTCAGTTACGACGACATTTACTGTATCATAGATCAAGTGATAAATTAGTTTGTGATGTTTGTGGAAAAATTATATCAACCGAACAGAACTTACGTAAACATAAATTAGTACATTTGGGTGTTAAACCACATAAATGTAAGCAATGTGGAAGAGCGTTCGCTCGTTCAACACAATTAAATGTACATACCCGTGTCCACACTGGTGAAAAACCAtatctttgtaatttttgtaataaagctttttctcaaaaaacatCGTTAGACGTTCATGTCAGATCTCACACCGGTGAACGACCGTATATTTGCGATATTTGCCAAAAAGGATTTATTCGTCCATCTTTACTGAAGGTACATCGGAGAGatcaacattaa
Protein Sequence: MNGGVTEPNSCGKKHNQEVRKNREILKRLIDVVCFLGEHELSFRGHSETEYSSNKGNYVDLVNLLAKYDEILQSHLDNSTRFKGTSNLIQNDLILCIEKVILKKIKYEIDEASFVGIILDETTDVANISQLSKVLRYVTKKGEIKERFIGFLNVSTQRTASVLHGIIQTIANDYNCGSKLAAQSYDGAVVMAGELGGLQVKVKETYPSALFVHFHTGEKRYNCEICKKKFTQRTPLVIHMRIHTGERPYKCNLCDMGFVRQEAYVNLSDQKLNIKNEVEVKRESDLTSSQLHSHIDFGISIIHTENPSNRTTKSVVKSDSMTTPPKREISKQKFECCLCNGKVLSSQRSYKRHMVTFHSKVAIKKNLDFIGQEAYVNLSGQELNIKNEVEVKREPNLSNLTNRNVTSKLKFSGAVSSKLQWQLASGVNNTGAKYPKSSSSNASTSRLSKSVATLDSDATKMKTSEQKIECRIQLASGVGITAKSGPSDASTGCSSKSVVTGSDDTERKMLEEKFECTLCAKFFIRKNNYTRHMKTAHGDFIERKMPVQKIECAQCAELFITKRNYSKHMKTAHSGEYNKNVCEFCEESFPHPSVLKKHIGVVLSVTIIIDFVLIFSYFRLIGVEENYLLITESAEAIIVPQTGVIGINNLNVNTRSVNDEIPERITTNTTKQYVVSTTAKTRFRLKQLHICKICGKHFPSSTKLNRHGVVHSNERPYNCPLCSKSFKLLAQVRGHMTVHINENLNPDAIAATETNVVAMPKPNIVSSVAINQDKQSIMDELESNAGTSLEGNESMKKNVKITCEICNKSFAYSYHLKKHMTTHCSENEEMLIRVHSCPTCKKCFNSKARLSLHLPIHSEERPFICHFCCKSFKQLNVLRTHIEGHVGDKQFKCKQCERIFRTRSLLKSHERIHLDASPVICDVCGKQYRSKANLKIHFDSAHSKKYWCNECSVNLKNESDFIKHRNTHFGIESSKTHTCPVCQKSFYFNRQLRRHLLYHRSSDKLVCDVCGKIISTEQNLRKHKLVHLGVKPHKCKQCGRAFARSTQLNVHTRVHTGEKPYLCNFCNKAFSQKTSLDVHVRSHTGERPYICDICQKGFIRPSLLKVHRRDQH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -