Mvil080859.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Melanotus villosus
Gene Symbol
-
Assembly
GCA_963082815.1
Location
OY720426.1:4710570-4713083[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 0.00054 0.12 15.3 1.3 1 23 190 212 190 212 0.98
2 19 0.014 3.2 10.8 0.5 1 23 271 293 271 293 0.98
3 19 2.5e-07 5.6e-05 25.8 1.8 1 23 299 321 299 321 0.99
4 19 9.7e-06 0.0022 20.8 0.8 1 23 327 349 327 349 0.99
5 19 2e-05 0.0045 19.8 0.3 1 23 355 377 355 377 0.99
6 19 1.8e-05 0.0041 19.9 1.6 1 23 383 405 383 405 0.99
7 19 0.00091 0.2 14.6 0.4 1 23 411 433 411 433 0.99
8 19 2.1e-06 0.00046 22.9 1.4 1 23 439 461 439 461 0.99
9 19 3.8e-06 0.00085 22.1 0.6 1 23 467 489 467 489 0.99
10 19 1.4e-05 0.0031 20.3 0.4 1 23 495 517 495 517 0.99
11 19 1.1e-05 0.0026 20.5 1.2 1 23 523 545 523 545 0.98
12 19 1.5e-06 0.00034 23.3 2.8 1 23 551 573 551 573 0.99
13 19 1e-05 0.0023 20.7 0.2 1 23 579 601 579 601 0.99
14 19 1.1e-06 0.00025 23.7 3.5 1 23 607 629 607 629 0.99
15 19 5.6e-05 0.013 18.4 0.1 1 23 635 657 635 657 0.99
16 19 3.8e-06 0.00086 22.0 4.3 1 23 663 685 663 685 0.99
17 19 1.9e-05 0.0043 19.8 0.1 1 23 691 713 691 713 0.99
18 19 2.9e-05 0.0066 19.3 3.1 1 23 719 741 719 741 0.99
19 19 0.002 0.45 13.5 3.1 1 23 747 769 747 769 0.99

Sequence Information

Coding Sequence
ATGGGTTACGCTTCCACATACGTTGATCTCATGCACATGGTGcaacaaaacaaagaacaagAACGTTGTCGTTACGAAGACAACGACATCAAACCGACTTACATCGAAGTAAAACAAGAACATCCACCTGAAGAAATCCAACAGTATCCTTTATATCCTACCTATTTCGATGCCGCCATTAAAGAAGAACGATTAGAAAATAGTTACGAAGCCGACGTCGAGTATTCTTCCACTTATATAGATTTAGAACAACCGCCACCTCCGTCGCAAACGCAAACAAATTCCGactttaaaattgttaacatCGAATCGATGATGTACGCTAGTAATTCTTCcaattgtaatgtaaataaggATGGAAGTAATTTGTTTAATCATAACCGAGATGCTTCATATAATGGAGATACGTCATACAAAAGAGACGTTCCGTTCAACCGCAAAATCCCGCTCAATCACGAAATCTCATTAAATTGCGAGGTTTCGATCAATTCCGAAGTTCAATTAAATTCCGAACTTTCGTTCAATCACCAAGTTCCTGTAGATTCGACACAAAACCAAGACGTGCCATACAAGTGTAAAGATTGCGGTTACGGAGCGCATAGCGAATCTGATTTGATCCATCATTTAAGGGCTCACCTAAACAAAGATTCCGTTGAGAATACGACAGAAGAAGTAACACCGAAGTGTGATACTCAAGTATCAGATACAAAGACGAACTTAATGGAAACATCGAATGAAATCAAAACGGAAAATGATCCTCAGGCCTTCAATCCGTTTAAGTATATGAAAACGTTGTTCGGTAAGCATTCGTACGAATGTAACGTATGCGGTTATAAAACGGCACTCAAACGTCGTTTAATTCTCCATACGAGGCTTCACGAGgagaataaattgtttaaatgtacGGAATGCGATTACGTTTGCGCTCAGAAGAGTAATCTCAACGTTCACATGAGGATACATACCGGTCATAAACCGTACAAGTGTAGCGAGTGCGGGTATTGCACCGTATCGAATTCGGCTCTAATCGTTCATACCCGAATCCATACCGGTGAAAAACCCTACACGTGTAACGTGTGCGGTTACAACACGATATCAAAATCCGCTTTAACTGTACATACGAGGATTCATACAGGGAGTAAACCGTACAGATGTACGATGTGCGTTTATCGAACCGTAACAAAATCATCGTTAACCGTTCACATGCGAACTCATACAGGCGATCGACCATACAAATGTAATCTTTGTGCTTATAGTACGACTGCCAAGTCCGCTTTGAATGTGCACACGAGGATTCACCAAGGATACAAGCCGTTCCAATGTCCCGAATGCGAATACAGATGTACGCAAAGGAGCGGCTTAAACGTTCACATGCGGGTACATTCGGGTGATAAGCCGTATCAATGTGAGGAATGTGAATACAGAAGCAGCAACAGGAGTAGTTTAGTCGTTCACATGCGAACGCACACGGGCGAAACCCCGTATAAATGTAACGAATGCGAATATAGCACCGCATCGAAATCCGCACTAAACGTTCATACGAGAATTCACGGCGATAACAAACCGTTTATATGTATGGAGTGCGGATATAAATGTGCACAAAGAAGCGGTCTAAATGTACATATGCGAACTCATACAGGTGATAAACCGTACAAGTGTTCAGAATGTGATTACCGATGCAGTTATCAGGGTAACTTAAAAGTTCATATGAGGGTCCATACCGGTGAAACCCCGTTCAAATGTTTCATCTGCGGTTATAGCACCACAGCTAAATCGGCGCTAATCGTACACATGCGGATTCACACCGGTGAAAAACCGTATAAATGTACCGAATGCCCTTATAAATGTAGCACGAAGAGTAGTTTAAAAGTACACATGCGTGTTCACACCGGCGAAACCCCTTACGAATGTTCAATATGCGATTATCGAACCACCGCTAACTCTGCACTCGTCGTACACATGCGTATACACACAGGCGAGAAGCCGTACAAATGTACCGAATGCTCGTACAGATGTAGCAACAAAAGCAGTTTGAAGGTGCACATGCGAGTTCACACAGGCGAGACACCTTTTAAATGCGGAGTTTGCGGTTATAGCACGACAGCCAATTCTGCTCTAATAGTACACATGCGGATACACACAGGTGATAAACCGTTCCAGTGCGCGGACTGTTCGTATAGATGCAACAACAAAAGCAGTTTAAAGGTACACATGAAGGTTCACGCCGGTCGAACACCGTATAAATGCGCAGTGTGTGCTTACACGTGCAGGAAAAGCTTCGTCTTAAAACGACATATGCGAGTACATATGAAAGAAGAAGAGGAGCCTGAAGAGGATACTGTGGATGTTCCCGAAGAAGACGTTCCGGAAACCGAGGAAGTTCCCGAAGAGACTCCGGAAAGCGAGGATGTTGCGGAGGCACAAAGCGAGGCACCGCAAAGCGAAAATGAAGTTCCGCAACCGGATGTTCCAGTAAACGAAGTTCCAAAAACCCCAGTTATAACAATAGAGTAA
Protein Sequence
MGYASTYVDLMHMVQQNKEQERCRYEDNDIKPTYIEVKQEHPPEEIQQYPLYPTYFDAAIKEERLENSYEADVEYSSTYIDLEQPPPPSQTQTNSDFKIVNIESMMYASNSSNCNVNKDGSNLFNHNRDASYNGDTSYKRDVPFNRKIPLNHEISLNCEVSINSEVQLNSELSFNHQVPVDSTQNQDVPYKCKDCGYGAHSESDLIHHLRAHLNKDSVENTTEEVTPKCDTQVSDTKTNLMETSNEIKTENDPQAFNPFKYMKTLFGKHSYECNVCGYKTALKRRLILHTRLHEENKLFKCTECDYVCAQKSNLNVHMRIHTGHKPYKCSECGYCTVSNSALIVHTRIHTGEKPYTCNVCGYNTISKSALTVHTRIHTGSKPYRCTMCVYRTVTKSSLTVHMRTHTGDRPYKCNLCAYSTTAKSALNVHTRIHQGYKPFQCPECEYRCTQRSGLNVHMRVHSGDKPYQCEECEYRSSNRSSLVVHMRTHTGETPYKCNECEYSTASKSALNVHTRIHGDNKPFICMECGYKCAQRSGLNVHMRTHTGDKPYKCSECDYRCSYQGNLKVHMRVHTGETPFKCFICGYSTTAKSALIVHMRIHTGEKPYKCTECPYKCSTKSSLKVHMRVHTGETPYECSICDYRTTANSALVVHMRIHTGEKPYKCTECSYRCSNKSSLKVHMRVHTGETPFKCGVCGYSTTANSALIVHMRIHTGDKPFQCADCSYRCNNKSSLKVHMKVHAGRTPYKCAVCAYTCRKSFVLKRHMRVHMKEEEEPEEDTVDVPEEDVPETEEVPEETPESEDVAEAQSEAPQSENEVPQPDVPVNEVPKTPVITIE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-