Mvil029551.1
Basic Information
- Insect
- Melanotus villosus
- Gene Symbol
- clz9
- Assembly
- GCA_963082815.1
- Location
- OY720419.1:110360133-110363248[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.006 0.82 11.9 0.2 5 21 22 38 21 39 0.93 2 2 0.012 1.6 11.0 0.0 19 38 108 128 108 132 0.88
Sequence Information
- Coding Sequence
- ATGcctagaaaatataaaagagaGCTTGGCAGCCGATCGTACGGAAATTACCAAAAGAAATACATGGTTGCAGCAATAAAAGCCGTGCAATCAAAACAAATGTCTATAAAGCGGACAAACCAACGCGGTGGCGGTGGCGGGCGCGGTAGCGGTGGCGGGCGCGGTAGCGGTGGCGGTGGCGGTCAGATTGTGCCCATGTTCGCCATGGAAGTGCGCACACACACGCGACCGCGTGAGTATGCGGACACGTGTTCGCCACCGCAACCGCCATCGCGCCCGCCACCGCCACCGCTCCCGCCACCGCGTTGGTTTGCGCACCGCTTAAGGCAGGCATCTGAACAGTATGCCATTCCTAAAAGCACTCTCGCTCTAAAAGTTAAAGGCTTGCATCCCCTACAAACCGGGGGACAACCCGTTTTAAATTCTGAAGATGAAAAAAAACTCGTTGAAGGTATTCAGCAGTGTGCCAAATGGGGTTTTCCTTTGACACCTTTTGACATACGTTTACTTGTAAAAGGTTACTTTGACCGTAAGGGTAAAAGaatcaagaaatttaataacaatatgcCCGGGCCAGATTGGTTTAAGTCATTTATACAACGCCACAACAAAGAATTGACAACTCGGCTGTGCGAAAACATAAAAAGGGCTAGAGCAGCAGTGTCGAAACAAATAGTACAGGATTATTTGCAAGAGTTAGAAATTTCCCTAGAAAATGTAGACCCaagcaatatttacaatttcgaTGAAACCAATTTCAGTGATGATCCGGGGCGAATAAAAGTTGTTGTTAAACGATCATCTAAACATGCTGATCGTCTAGTTGATTCATCAAAAACATCTGTGTCCGTAATGATGGCGGGTAGTGCTACAGGGGAAGTTCTGCCTCCATATATTTGCTATAAAGCTGACCACCTCTGGAAGACATGGACCGAAAATGGTCCAGAAGGCTGCCGTTATAACCGCTCTAAAAGCGGTTGGTTTGATGGGTGCATATTTGAAGACTGGTTCACATCTCTCCTTCTTCCAATCTTATCCAAAAAATCAGGTCATAAGGTAATTATTTGTGATAACTTGTCTTCACATCTATCACTGCACGTTATTGAGGAATGTAAGAAAAACGATATAAGTTTTGTTTTGCTACCCCCAAATAGTACTCATCTCTTACAACCTCTTGATGTTGCCTATTTTAAACCATTGAAAACTGCATGGCGAGAAGTACTAACCACTTGGAAGAAACGTAATAGAGGTGTAGTGCCCAAGGATATTTTTCCAAGTTTACTACGGGacactttaaataaacttgATGGTAGAGGAGGGGAAAATTTAATAGCTGGGTTTGCTGCGACTAGCATTTATCCTTTCGATCCTGAAAGAGTGTTAAAGAAACTCCCTGATGAAGAGATAGATGAAAATAATGATGAAGCTTGGACAGGTTCCTTTGTTGAACTGTTAAAAGATGCTCGGCTAAGTACAACACCTAAGCAGCGACAGAGGCGGCAAAAGCTATCAGTAAAAGCTGGAAAAAGCGTTGGTGCTCCTGATAATGAAACCTGTGATACAGATAATGAAGAAACTAATGAAACATGTGATACAGAAGACTTAGAAATAGATGCACTATCAGAGACTGAAGAATTAGATGAGGAAAAAGAAGTTATGGATTTTGAAGAAGAAGACTTAAACCAAGAGATAAATGTTGGTGACTTTATTTTAACTAAGTTTAAAGTGGGAAAAAAGAATAATATGAAGTTTGTTGCAAAAGTCTTAGAAATACAATCATCATCATCCAATGAAAACCAGAAAATTAAAGCTGAGTTTTTAAGACCTAATAGTACAAAAAATGATACTTTTATTTATCCAAACGTAAAAGATGTAGCTGTGATAACAAAACATGAATTTATTGGTGTTCTTAAAAGACCCACTGAACTGCGACGTGGTAGATTTAAGTTTGCAAGGTccttattttaa
- Protein Sequence
- MPRKYKRELGSRSYGNYQKKYMVAAIKAVQSKQMSIKRTNQRGGGGGRGSGGGRGSGGGGGQIVPMFAMEVRTHTRPREYADTCSPPQPPSRPPPPPLPPPRWFAHRLRQASEQYAIPKSTLALKVKGLHPLQTGGQPVLNSEDEKKLVEGIQQCAKWGFPLTPFDIRLLVKGYFDRKGKRIKKFNNNMPGPDWFKSFIQRHNKELTTRLCENIKRARAAVSKQIVQDYLQELEISLENVDPSNIYNFDETNFSDDPGRIKVVVKRSSKHADRLVDSSKTSVSVMMAGSATGEVLPPYICYKADHLWKTWTENGPEGCRYNRSKSGWFDGCIFEDWFTSLLLPILSKKSGHKVIICDNLSSHLSLHVIEECKKNDISFVLLPPNSTHLLQPLDVAYFKPLKTAWREVLTTWKKRNRGVVPKDIFPSLLRDTLNKLDGRGGENLIAGFAATSIYPFDPERVLKKLPDEEIDENNDEAWTGSFVELLKDARLSTTPKQRQRRQKLSVKAGKSVGAPDNETCDTDNEETNETCDTEDLEIDALSETEELDEEKEVMDFEEEDLNQEINVGDFILTKFKVGKKNNMKFVAKVLEIQSSSSNENQKIKAEFLRPNSTKNDTFIYPNVKDVAVITKHEFIGVLKRPTELRRGRFKFARSLF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00977285;
- 90% Identity
- -
- 80% Identity
- -