Mvil042771.1
Basic Information
- Insect
- Melanotus villosus
- Gene Symbol
- -
- Assembly
- GCA_963082815.1
- Location
- OY720421.1:34548092-34550076[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-07 1.7e-05 26.9 0.1 1 37 15 50 15 55 0.94
Sequence Information
- Coding Sequence
- atgcCAAGATTGTGGAAACATAAAACAAACCGTATAAGGAAGAGCAATGATGAAATTAAAGCAGCTGTTCAGGAAGTTTTAAATGGATCATCTATCCGGGAAGTTTCAAAGCATTATTCGATATCATATTCTGCTCTTCAACGTCATGTACACAAGGCTAAAAATTTGCCCGATGGAGTAACTTTTGAACACCAACCAAATTTATGTATTCGTCAAATTTTTTCGCCCCAACAAGAACAGATGCTGGCGAACTATTTAAAGAAATGCTCTCGAATGCATTACGGATTAACCACGGCGCAAACAAAGCAGTTAGCATATAAATACGCCAAAGCACTTAATGTACCGGTTCCTGAAAAATGGGGCGACGAAGAGAGTGCCGGACGTGAATGGTTGTTTGGATTTTTCAGAAGAAATCCAGATTTGTCACTGAGGGCTCCGGAAGCTACAAGCATGAGCAGATCAACGAGCTTTAATAAGTACAACGTTacgaaattttttgataatattcagTCAGTCTACGAACGCTATAATAGTGGCAGAAAAAGGACTCAAACAAGAAATACTGTACCACCAGCGTACATTTTcccaagaaaaagaaatttggatGTTCTGGGCCATGGAGCCCCATCTAACAGTTTAATATTGGGTTCAGCCACTGGGTGGATGACCGCTGACAGTTTTTTggtagtttttaaacattttgtgaAGAATGTCCGTTGCACCAAAGATACCCCAGTGGTTCTCTTCTTAGACAATCATGAGTCCCATGTAACTCTCGAAGTAAtagaagaaggaagaaaatcTGGCGTCCATTTGATTACATATCCCCCACATTGTAGTCATCGACTGCAGCCCTTGGACGTCGGAGTTTACGGTCCTCTAAAAGTTCGCTATAATCAAGTGTGTGACGAGTGGATGTCCAGTAATCCTGGGAAATCTATAACAATTTACAACATTGCAGAATTGTCAAATAAGGCTTTTACTTTAgccttttcaaaacaaaatataattaaaagtttcgAAAAGACTGGAATTTGGCCCATGAATCGCTTGATTTTCTCCGATGAAGACTATTTGATGTCATCTGTTACGGATCGCCCTGAAGTGGGTGCACCAGTAGGATCTTCTAGCGATATTGCGGAGCAAGAAGAAACTGAAGTTTTATTTAGCACGCCATCTACTTCAAGATTAACGGAGACAACCAATTTAAGTGAAACATCGGATGTTTCATGTTCTatGGTTTCTCCGGAGGATGTTGTACCCTACCCAAAGGCTCTTCCTAGAAAGTCTATAAATCGGGGTAGGAAAACTGGGCGTACGCGAATCCTCACTGACACCCCAGAAAAAAAAGAGATagaaagagaaagagaaaagaagaagaaagtaccACGATTGCAGTTCGATAGTTTACCTtgtaagaagaaaacaaaacctGTCCCCAAGAAGGTACCAATTGATGAAGACAGCTCCTCCGACTTGGATGAACCTGATCTAAAGGATAGTTCTGGTGACGAAAACTATGAACCAGAAATGTCTGAAGAGGATTTCGATTATGGTATAGAAAATGTGGAGTCTGGTGATTTCGTTCTAATTAAATTCCCAATGAAATCCACGATAATCCACTATGTTGGACGTATTGAAAAAGAAATAGGTCCTTCGGAATATGAAATAATCTTTTTGCGGAAAAAGGGGAGAGGATTTGTTTTCCCAAACATACCAGATGTATCTACAATCTCCAAAGAAGATATTGTTCTCAAATTGCAAAGACTCCTCAAAACTGGGGGAAGTGACagaattttttctgtttatatgTTCGATGTAAATTTTGATGGTTTTTCGAATTTGCGTTAA
- Protein Sequence
- MPRLWKHKTNRIRKSNDEIKAAVQEVLNGSSIREVSKHYSISYSALQRHVHKAKNLPDGVTFEHQPNLCIRQIFSPQQEQMLANYLKKCSRMHYGLTTAQTKQLAYKYAKALNVPVPEKWGDEESAGREWLFGFFRRNPDLSLRAPEATSMSRSTSFNKYNVTKFFDNIQSVYERYNSGRKRTQTRNTVPPAYIFPRKRNLDVLGHGAPSNSLILGSATGWMTADSFLVVFKHFVKNVRCTKDTPVVLFLDNHESHVTLEVIEEGRKSGVHLITYPPHCSHRLQPLDVGVYGPLKVRYNQVCDEWMSSNPGKSITIYNIAELSNKAFTLAFSKQNIIKSFEKTGIWPMNRLIFSDEDYLMSSVTDRPEVGAPVGSSSDIAEQEETEVLFSTPSTSRLTETTNLSETSDVSCSMVSPEDVVPYPKALPRKSINRGRKTGRTRILTDTPEKKEIEREREKKKKVPRLQFDSLPCKKKTKPVPKKVPIDEDSSSDLDEPDLKDSSGDENYEPEMSEEDFDYGIENVESGDFVLIKFPMKSTIIHYVGRIEKEIGPSEYEIIFLRKKGRGFVFPNIPDVSTISKEDIVLKLQRLLKTGGSDRIFSVYMFDVNFDGFSNLR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00977733; iTF_00977732; iTF_00977734; iTF_00977735; iTF_00977736; iTF_00977737; iTF_00977738; iTF_00977739; iTF_00977740; iTF_00977741; iTF_00977878;
- 90% Identity
- iTF_00977732; iTF_00977733; iTF_00977734; iTF_00977735; iTF_00977736; iTF_00977737; iTF_00977738; iTF_00977739; iTF_00977740; iTF_00977741; iTF_00977878;
- 80% Identity
- -