Mvil083544.1
Basic Information
- Insect
- Melanotus villosus
- Gene Symbol
- -
- Assembly
- GCA_963082815.1
- Location
- OY720426.1:21144618-21147013[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.1e-08 5.6e-06 28.4 0.0 3 38 18 53 17 57 0.91
Sequence Information
- Coding Sequence
- ATGCCTAGAAAGAAGGAAGATGAGGGAAAGAAGCGAAAGTTTTGGTGTCAGACGCAGATGGCTAAGGCTATAGAAGCTGTTCGTGAGAAGAAGATGGGGTACCTTAAGGCGTCCAAGGAATTCCAGGTTCCCAGAGCGTCTCTCTTCCGCCTTGTCAACAGTAAGGAGAAAAATGCAGAGGTAGCAGCCTCAACTACTCTTGGCCGTAAGCCAGTTTTTCCTACAGAACTAGAAGACgagttacaaaaatatttagttgaGATGGAGGCCATGTTCTATGGGCTCACAAAAAGGGATGTCTGCAGTCTTGCCTATCAACTTGCGGTTCGCAATAACATACTACCCCATCCATTTAAGAACGAAACTGCTGGCAAGGACTGGTTCTACGCTTTTATGAAAAGGAACCCGAAACTTTCAGTCCGTAAACCCATGGGTACATCTTTTGCCAGAGCCAGGGGATttaataaagaagaagtagacAAGTTTTTTGACCTGATCGATgttgttttcaaaaaacacaaCTATCCTCCTAACAGGATATTTAATGTCGACGAAACTGGTTTATCTGTGGTCCAAAGTAAAGTTCCTCATATAGTAGGCCTAAAAGGAAAGAGACAAATTGGGTCTCTTACTTCAGCGGAAAGAGGTTCTCTCGTTACCATCGTTCCCTGTATGAGTGCAGGAGGAGACTTTGTCCCGCCTCTTGTGATATTCCCCAGGAAAAACATGAATGAACAACTTCTTAGAGGTGCTCCACCAGGGACCATCGCAGCGTGCCACCCGTCTGGTTGGATACAGACGAACATTTTTACTAAATGGTTTAAACATTTCATTGCTGTAACAAAACCTTCAGCTGAGTCACCTGTCCTGCTTTTCCTTGACGGGCACACAACCCACAAGCGTAACATTGACGTAATTAATTTATCTCACTATAGTGAGGAAGTGAGATGTTTTTTAAGGCATAGCTCAAGGCCCTTGAGTGTTTTTGATATGATGGAACTGTTTGGCAGGGCTTACCTTAAAGTACAACGTGGGGACATAGCAGTAAACGGCTTCAAAGTGACTGGTATTTATCCTGTCAATAGAAATGTTTTTAGCAGTGAAGATTTTATTGCTTCTACACTCACTGTTCCTAGGCCTCAGACTATGAGACCAACAAATGACCCTCTTCCATGTTCGTCTACAAGATCTGATTCACCTCAACCCTGTTCTTCCAAGGCTCCTGATGTGGTTGTCCCTGATACGtctaaaTCAACAAATTTTGTCCTACCCATAGAGATATCACCACCACCTCCAAAAAAGCAGAAGTCAAATAGAGGCAGGAAAGCTGGATCTTCTTCTATAATAACCCACTCTCCATATAAAAAAGAGTTAGAGGATGAACTGAAAGAAAAGGACAAAACGAAGGAACCAGAAGCTTCAAAACACCAAAAGAAACCGAACATTCAAAGACCCCCTGTTAAGAAATTAAACTTAGACCGACCTTCTACACCTAAACCTACTAGAGATGACTCCAGTGTTAGCAGCGATGAATCGTTCCATTCTGACGTATCATCTGTAATGGACTTCATGCCATCAACTAAAGAACCGGAAAACAAAGACGCTGAATGTATCTTCTGTAGCGGAAAATTCTCCGAAGATCAACGAGGGGAAATTTGGATTCAATGCTTCAGGTGTTCTCTGTGGGCTCACCTTGACTGTACCGGAGCAGAGAAAGAAGATTATATCTGTGACTTTTGTATGTCTAATTAG
- Protein Sequence
- MPRKKEDEGKKRKFWCQTQMAKAIEAVREKKMGYLKASKEFQVPRASLFRLVNSKEKNAEVAASTTLGRKPVFPTELEDELQKYLVEMEAMFYGLTKRDVCSLAYQLAVRNNILPHPFKNETAGKDWFYAFMKRNPKLSVRKPMGTSFARARGFNKEEVDKFFDLIDVVFKKHNYPPNRIFNVDETGLSVVQSKVPHIVGLKGKRQIGSLTSAERGSLVTIVPCMSAGGDFVPPLVIFPRKNMNEQLLRGAPPGTIAACHPSGWIQTNIFTKWFKHFIAVTKPSAESPVLLFLDGHTTHKRNIDVINLSHYSEEVRCFLRHSSRPLSVFDMMELFGRAYLKVQRGDIAVNGFKVTGIYPVNRNVFSSEDFIASTLTVPRPQTMRPTNDPLPCSSTRSDSPQPCSSKAPDVVVPDTSKSTNFVLPIEISPPPPKKQKSNRGRKAGSSSIITHSPYKKELEDELKEKDKTKEPEASKHQKKPNIQRPPVKKLNLDRPSTPKPTRDDSSVSSDESFHSDVSSVMDFMPSTKEPENKDAECIFCSGKFSEDQRGEIWIQCFRCSLWAHLDCTGAEKEDYICDFCMSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00307704; iTF_01448449; iTF_01448450; iTF_01448451; iTF_01446502; iTF_01448446; iTF_01448447; iTF_01448448; iTF_00307796;
- 90% Identity
- -
- 80% Identity
- -