Mvil073843.2
Basic Information
- Insect
- Melanotus villosus
- Gene Symbol
- -
- Assembly
- GCA_963082815.1
- Location
- OY720425.1:9873337-9875160[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-08 1.8e-06 30.0 0.0 2 37 12 48 11 54 0.88
Sequence Information
- Coding Sequence
- ATGGCTGAAGAGAACAAAAGAGGAAAGTGGTCAGAAAATAATATGAAAGAGGCAATTAAGAGGGTTATCGAAAATCATATGTCTGTACGAGAAGCAGCATTGCAATTTTCGGTGCCAAAAAGTACATTAGGCgacagaataaaaaatatacggaGTGGGAAATTAATTAACATGAATCCCCAAATGGGTCGTTTTACGAAAACATTTTCAGAGGAATTAGAGTCGCAGATTGTAGCTCATCTCAAAGATCTCGATAATAGAATGATGCCAATGAACCGAAAAGAgtttatgaaatttgtttttgcgCTTGCTGAGCATGTTAGGGTTCCCCATCAATTCAACGTTAACAAACGGGAAGCCGGGAAAAAATTCTATTATGAATTTATGGCCCGTCATCCTGAATTTTCGTTGCGTACTCCTCAATCCACAAGCATCCAGAGAGCTGTGGGTTTCAACAAAGCACAGGTAGATCTATTTTTCTCTAAATATGAAGAGTTGATGTCCAAATACAATTTTGCACCTTCCAAAATCTTTAATTGCGACGAGACGGGCATATCAGTAGTTCATGATAATGCAATTAAGGTTTTGTCgctaaaaggaaaaaaacaagTTAGTAAAATGACATCAGGCGAAAGAGGAAAGAACATTACCATTCTGCTGTCAATCAATGCTACTGGTGATCAATTCCTTCCTCCGTTGTTTGTCTTTCCAAGGAAGAAAATGatagaggaattaaaaaaagatgCTCCTGAGGGTAGCGGCTTTGTTGCTGAAGAAAGTGGGTGGATTACTACTAGTGGTTTTCTGACCTGGCTTAAGATGTTTGTTGCACGAGTCAACCCAACCAAGGAGAGTCCATCTCTTTTAGTGTTAGATGGTCACAGTACCCATAAAGATTTTCAAGTGATTGTGTATGCCAAGGAACACAATGTGCACATGATTAGTCTTCCACCACACACCACACACAAAATGCAGCCCCTCGACCGCACCGTAATGAAACCATTCAAGGCTGCATACAATAACGCTTGCGGCGAGTGGATGCGAAAATATCATCCCCTTAAAATAGCAGTGCGAGACATTGCCGGATTAGTGAACATTGCTTTTACGTCCATATGCCGAATGGAGCTTGCAAGATCAGGTTTTCGCTGCACGGGACTATTTCCtgtgcaaaaagacattttcaCGGATTTGGACTTCCTCGCAGCCCACTATGCAACACCTGCAGATACAGTTGGAGGGCTCAGAATTCCAGATTCTGCTCTTCCTGGCCCTTCAGGAGTTAGACCTTTGCCTGCCTCTCAACCAATCAAGACTGCTGAACAAACTCAAATTTCCACTCCTTCAGCTAAGCCTACACGTCGTACAGTAGGCTCGACAACGTCagctgaatttcaaaaaatagtgGAACTAATCTCTCCAGCTCCCGATGAGACACGAAAGAGAATAGCAGTGAGAAAGGGAAGAAGTGAAAAAAGCGAAATTTTAACCTCCACGCCATACAAGAACATGTTAGAAGAGAAAGCTAGAACTCGCCAAGAAAAGAAGGACAGAGCTGAACAGAAAAAAGAGAAAGCAGGAAAAAGTGCAAAAAAAGTGTTGTTTGCTGATGaagaacaaaacacaaagaacaaaaagaaacgtCCTATTGATAGTCCCAAATCTCAAACGTCTCGAACTGACCTCACAGAATGCATAATCTGCTTAGAAACATTTGATGAGGAATGGGTGCAGTGCATGTCGTGCAAAGGTTGGGCCCATGTCGACTGTACTGCGCAAGACgacataacattttttaaatgtgatttttgtGCGCCCAACAATTGA
- Protein Sequence
- MAEENKRGKWSENNMKEAIKRVIENHMSVREAALQFSVPKSTLGDRIKNIRSGKLINMNPQMGRFTKTFSEELESQIVAHLKDLDNRMMPMNRKEFMKFVFALAEHVRVPHQFNVNKREAGKKFYYEFMARHPEFSLRTPQSTSIQRAVGFNKAQVDLFFSKYEELMSKYNFAPSKIFNCDETGISVVHDNAIKVLSLKGKKQVSKMTSGERGKNITILLSINATGDQFLPPLFVFPRKKMIEELKKDAPEGSGFVAEESGWITTSGFLTWLKMFVARVNPTKESPSLLVLDGHSTHKDFQVIVYAKEHNVHMISLPPHTTHKMQPLDRTVMKPFKAAYNNACGEWMRKYHPLKIAVRDIAGLVNIAFTSICRMELARSGFRCTGLFPVQKDIFTDLDFLAAHYATPADTVGGLRIPDSALPGPSGVRPLPASQPIKTAEQTQISTPSAKPTRRTVGSTTSAEFQKIVELISPAPDETRKRIAVRKGRSEKSEILTSTPYKNMLEEKARTRQEKKDRAEQKKEKAGKSAKKVLFADEEQNTKNKKKRPIDSPKSQTSRTDLTECIICLETFDEEWVQCMSCKGWAHVDCTAQDDITFFKCDFCAPNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00977571; iTF_00977572; iTF_00977573; iTF_00977574; iTF_00977575; iTF_00977576; iTF_00977577; iTF_00977578; iTF_00977580; iTF_00977713; iTF_00977714;
- 90% Identity
- iTF_00977571;
- 80% Identity
- -