Mvil076326.1
Basic Information
- Insect
- Melanotus villosus
- Gene Symbol
- -
- Assembly
- GCA_963082815.1
- Location
- OY720425.1:21813053-21813769[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.4e-09 1e-06 30.8 0.0 1 43 14 56 14 58 0.94
Sequence Information
- Coding Sequence
- ATGCCTAAAGTGAAGAGTAAAGTTCCACGACATTCATGGACCGAAGAGAATATGCGTGAAGCGATGCAAAATGTGCAGCAACAAAAGATGGGTTGGAAACTTGCATCCAAAACTTTTAATGTTCCAGCGACTACTCTGCGTCGTAGAGTAAAAAACAATATGGGTTATGAGAAAGGCGACCTTGGAGGATGCCGGCCAGCTTTTTCCAAAGAGGTAGAGGACGAAATTGTTACCCACATTACAACTATGGAAACCCGATTTTTGGGCCTCTCCACAAGTGATGTAAGATCACTGGCGTATCAGATTGCGGTGCAAAACAATATTCAACACAAATTCAGTCATGTTAATGGATGGACATGGTTGCATTGGTTTCTTAAACGGAATCCAACAATAAGCTTACGGACACCAGAAAATACATCTGTAGCTCGAGCGCAAGCGttcaataaagttaatattGGAACCTACTTCCAACGTCTTGACGAAGTTTTGACACTGTATAAATTTTCTGCcgaaaatatatacaatatgGACGAGAGCGGCTTCTCTACGGTCCAGACTAAGCCTGGCAAAATATACGCCACAAAAGGTCGCAAACAAGTGGGTGTCTTAACAAGTGCGGAAAGAGGCcagcattatacaacagtaTGTGCAATGAACGCAGTTGGGACATTTATACCTCCGGCTTTCATATTTCCCAGGAAAAATATGAAACCATAA
- Protein Sequence
- MPKVKSKVPRHSWTEENMREAMQNVQQQKMGWKLASKTFNVPATTLRRRVKNNMGYEKGDLGGCRPAFSKEVEDEIVTHITTMETRFLGLSTSDVRSLAYQIAVQNNIQHKFSHVNGWTWLHWFLKRNPTISLRTPENTSVARAQAFNKVNIGTYFQRLDEVLTLYKFSAENIYNMDESGFSTVQTKPGKIYATKGRKQVGVLTSAERGQHYTTVCAMNAVGTFIPPAFIFPRKNMKP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00977537; iTF_00977665; iTF_00977538; iTF_00977539; iTF_00977540; iTF_00977541; iTF_00977542; iTF_00977543; iTF_00977544; iTF_00977545; iTF_00977546; iTF_00977547; iTF_00977548; iTF_00977549; iTF_00977523; iTF_01289773;
- 90% Identity
- iTF_00977537; iTF_00977665; iTF_00977538; iTF_00977539; iTF_00977540; iTF_00977541; iTF_00977542; iTF_00977543; iTF_00977544; iTF_00977545; iTF_00977546; iTF_00977547; iTF_00977548; iTF_00977549; iTF_00977523;
- 80% Identity
- -