Mvil047543.1
Basic Information
- Insect
- Melanotus villosus
- Gene Symbol
- -
- Assembly
- GCA_963082815.1
- Location
- OY720421.1:74091912-74093912[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.9e-09 8.1e-07 31.1 0.0 3 38 17 53 15 58 0.91
Sequence Information
- Coding Sequence
- ATGCCAAAATTCAAGGGAAGAAAGAGTAACAGGGGCGACTGGAATCAGGACAGCATGAAGAAAGCATGCGATGCAGTAATTACAGGAACAATGTGTGTGAGACAAGCAGCTACATCTTACTCGGTTCCTAAAAGTTCACTTTTTGATAGGGTAAAAGCCCTGCGAAATGGCGAAGAAGTTACTCTTGTTGCCAAACTTGGACGTTTCAGCCAAACATTCAATTCTGAATATGAAACTATTCTTGTTAACCATGTAAAGGATTTATCAAGCAGATTAATGCCTTTATCTAGAAAAGAATTCCTAGAATTAGCTTTCCAATTGGCTGAAACACTGAAGATAACACATcgatttaataaagaaaaaaagtcTGCTGGTAAAGACTTTTACCAAGCATTTATGACTAGACACCCTGATCTTACACTAAGATCACCTGAATCTACTAGCCTCATGCGATGTGTAGGATTCAATAGGCCTCAGGTGGAGAGGTTTTTCAATAGTCTTTCACTGCTgatggaaaaatttaattttaccccGTACACAACCTATAATTGCGACGAAACTGGAGTTAGCACGGTCCATAAGCATGCAAAGGTGATATCCGAGAAGGGTATCAGACAAGTGGGCAAAATTACATCTGCTGAGAGAGGTAAAAACGTcacagttttgttttgtatgtctGCTGGTGGACAGTTTATACCTCCTTTCTTTGTATACCCACGAAAACGAATAAATGAGAGGCTAAAAATAGGCGCACCTTTAGAAAGTGTAGCCGAAGCTCAGCCCAACGGATGGATGAACGCGGATCTTTTCCTAAGGTGGATGAGACACttttgtaaatatgcaaatccATCTAAAGAACGGCCAGTATTGCTTGTACTTGACGGGCATGCAAGTCATAAAGATTTGAGCGTCATTACATTTGCTCGTGGGCATAACATCCATATGATTAGCACTCCACCGCATACTACTCATAAGCTTCAACCGCTTGATAGGACGTTCATGAAACCTTTCAAAAGTGCTCTATACGAAGCTTGTGGAGTATGGATGAGAGTGAATCCTGGAATGCGGATTTCAGAGTACGAAATTGCCGGATTATTAAATACTGCTTTCACCAGGGTATCTAGGGCTGCAATTGCTCAAAAAGGTTTCGAGTGCACGGGCATCATACCTTTTAATCCGGAAATATTTGACGATCTAGATTTTATGTCATCTGAGATAACCAACATACCAAATGCTCAAGACAAAAATCGCTCAATACATCCATCAACTAGTGTATCCACTGTTACTTCAGAAGATAATGTTAGTAGTTCATCGGCGAATAGACAGCACAGCTCAACTTTATCACACCACCCAGCTCAAAATATATCGCCGTCCCATACATCTTATCCCGAGACATCACGTTCACCACCACCACATTGTACACCACCACATTGTACACCACCACATCATGCAATGTCACACCAAATTTTACCACAACAAGATAATATGGCAAGTATACCTTGcaatacattttaccaaagcACTACTAAGATAAAGAAGCAGTTGGGCGTACTGGTTGCTAATTCAAATGATTCGTTAAACTTTAAACACACTTTAGAGTCATTTAGTCCAATACCAGATGCTTCAAAGAACAGATTAAACTCTAGAAAACGAAGATCGGAGAAAAGCGAGATATTAACTTCCACACCCTACaaaaactttttagaagaaaaagtacaatTGAAACAAAAGGCTGTGCCTCAGCGAAATTTAAGGTTgaaggaaaaaagaaattgcaaattgACATCAGGTATATCAGAAAACTGCAAATCGTTGCCGAGCACATCAAGAAACCGCAAATCAAGGTCTGCATCAACTGAAGGGACATACTGTATCGTATGTAAAGAATCGTTTGAAGAGGACTGGATACAGTGCTCCAAGTGTTTCGGTTGGGTGCATGAGGCTTGTGCAGAACTGTCAGAATCGTCTGAATATTATGCTTGTGATTATTGCAAAATGtag
- Protein Sequence
- MPKFKGRKSNRGDWNQDSMKKACDAVITGTMCVRQAATSYSVPKSSLFDRVKALRNGEEVTLVAKLGRFSQTFNSEYETILVNHVKDLSSRLMPLSRKEFLELAFQLAETLKITHRFNKEKKSAGKDFYQAFMTRHPDLTLRSPESTSLMRCVGFNRPQVERFFNSLSLLMEKFNFTPYTTYNCDETGVSTVHKHAKVISEKGIRQVGKITSAERGKNVTVLFCMSAGGQFIPPFFVYPRKRINERLKIGAPLESVAEAQPNGWMNADLFLRWMRHFCKYANPSKERPVLLVLDGHASHKDLSVITFARGHNIHMISTPPHTTHKLQPLDRTFMKPFKSALYEACGVWMRVNPGMRISEYEIAGLLNTAFTRVSRAAIAQKGFECTGIIPFNPEIFDDLDFMSSEITNIPNAQDKNRSIHPSTSVSTVTSEDNVSSSSANRQHSSTLSHHPAQNISPSHTSYPETSRSPPPHCTPPHCTPPHHAMSHQILPQQDNMASIPCNTFYQSTTKIKKQLGVLVANSNDSLNFKHTLESFSPIPDASKNRLNSRKRRSEKSEILTSTPYKNFLEEKVQLKQKAVPQRNLRLKEKRNCKLTSGISENCKSLPSTSRNRKSRSASTEGTYCIVCKESFEEDWIQCSKCFGWVHEACAELSESSEYYACDYCKM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00977513;
- 90% Identity
- iTF_00977513; iTF_00977518; iTF_00977522; iTF_00977520; iTF_00977521;
- 80% Identity
- -