Mvil036444.1
Basic Information
- Insect
- Melanotus villosus
- Gene Symbol
- -
- Assembly
- GCA_963082815.1
- Location
- OY720420.1:57679479-57679964[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-08 1.8e-06 30.0 0.0 1 45 18 62 18 62 0.95 2 2 9.6 1.3e+03 1.6 0.1 14 23 141 150 137 152 0.79
Sequence Information
- Coding Sequence
- ATGCCTACAGAATACACGAGGAAGGCGACTGGGGAAGGTCGTGCAAAGTGGACTGAGGATGACTTAATTTCTGCCTGTGAAGCCGTAAATAGTAACCGTCTAAACTATTATCAGGCCAGCAAAGAATTTAATATTCCGTATCGGACTCTTCGCAGACGATGCCAACgaaataaaatgacaaaacgTTCTCTCGGACCCGACTCAGTACTAGGCACAGACAATGAAAAGAGGTTGGTTTCTCATATACTGAAATTACAGAGCAGAGGATTTGCACCAACTATAAACGATTTACGAATAATGGCTTATCAATTTGCAGAAAAGTTAAATATAGCACATAAATTTAGCAAAGAGCGGGAGAAAGCTGGTTATGATTGGGTGCGTTCTTTCTTGCGAAGAAATCAAGAACTAACGATTAGACAATCAGAAGGAGTTTCAGTCAACAGAGCGCAGGGAATGAATAGAGACGaagtgtttaaatttttttaa
- Protein Sequence
- MPTEYTRKATGEGRAKWTEDDLISACEAVNSNRLNYYQASKEFNIPYRTLRRRCQRNKMTKRSLGPDSVLGTDNEKRLVSHILKLQSRGFAPTINDLRIMAYQFAEKLNIAHKFSKEREKAGYDWVRSFLRRNQELTIRQSEGVSVNRAQGMNRDEVFKFF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -