Basic Information

Insect: Melanotus villosus
Gene Symbol: -
Assembly: GCA_963082815.1
Location: OY720418.1:117658810-117661728[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.1e-09 1.5e-07 33.5 0.0 1 44 14 57 14 58 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.1e-09	1.5e-07	33.5	0.0	1	44	14	57	14	58	0.92

Sequence Information

Coding Sequence: ATGAACGCTAAAAAGACGTCTTATACCAGGTTTAATTATAGTGAAGAGGATTTGCGAAAAGCACTTGATTccataaaaaatggaaacatgTCTTTAAATGCAGCTAGTAAATGCTTTAATATTCCGAAAGGAACTttgcataacaaaattaaaggcaaagttcttttgcaaagaaaaatggGACCTGAAAGTGTCTTAAAACCTGAAGATGAAAATCGAATAGAGAAATGGATCTTAGACAAGGCCAAGCTGGGCTTCCCAATGCACCCTGAAGATGTCAAAGATGCTGTTCAAGGTATACTAAAAGCTCTTAAGCAAGAAAATCCGTTTGCAGACAGCAGACCAGGCAAAAAATGgctgcaattatttttaaaacgccaCCCGAAAATTTGTAAACGACAAACGGAAATAATCTCCAAAGCTCGTGCTTCAGTTACCGAAGATATGATCAGATCGTGGTTTAATGAATTAAGAGATTTtcttacagaagaaaattgtttagacgTACTTGACAACAGTAATAGAGTTCTTAATTGTGATGAAACGGGAATTCAGACTTGCCCAAAAACTGGTGTATTGTTAGGCCCTAAAGGTTACACGAATTTCTATAATATCGCAAGtgggaaagaaaaagaatcGATTACAgttctttgcactttttcagCTCAAGGGGACGTTTTACCACCCATGGTTATATTTCCCTATAAAAGAATGCCAAATCACATAATAAATTCTGTTCCTGATGATTGGGCCTGGGGCAGGTCTGACTCTGGTTGGATGGTATCAGCAACTTTTTATGAATATGTAGCGAATGTTTTATATCCCTGGCTCTTAAAACAGGAAACAAAATTTCCAGTGATTTTTTTTCTTGACGGGCACAAGTCCCATCTTAGTATAGAGTTATGTgacttttgtattgaaaaaaAGATTATTCTTTATTGCCTTCCCCCGAATGCGACACATATAGTGCAACCTTGTGATGTGGCAATATTTGGGCCCCTTAAGGTGTTTTGGAAACAGGTTGTAAGAaagcacaaacaaaattcaggAAAAGATATCACTAAATCAAACTTTTGTACAATATTTAAGGATGCTTTCGATAAAGCTGTGAAGAAAGAGACAATACAAAACGGTTTTCGGGTGTGCGGTCTGTATCCTTTTTCACCAGACTCTGTCGATTATTCTAAATGTATATCACAACGCAGACAAGAGTTACAAAAATCCCAAGTAAGAGACATTTCAAATGAAGATTATGCTGTTGCCACGAGggttattgaaaaaattattggcCCAGAAAGAAGTCTAGAATTTGAGCAAAAAAAAAGTTCCACCCTGAATAAAAATGTAGAGTCCATTTTTGATGTTTGGTTGAGTTGTAAAAAACATACtttagaagaaaatggaacaTTAGtagataattataaagaacatgACAACGACGAATTATTTGATATTACTTCCCTCCCTGTAGACATTATCGACGATAACTATTTGTTACAAgcaaattctgaaattgaaGACATTACAAGTTTAATTGAGGAAGATGAAATTAACAGTTTTCATAATTTAGTCCtagacaataatttaaatacagtagTAGAAGAGAATAAACGAAATGAAGAGCTTAAGCAACATAAGAAAAGTGAAGATTCTAACCAAGTAAATGAAAACCTTAAGGCAATTAATAATgagaataaagaaaatgaacatgTAATCAATGAATATGCATATGATCAtccaattcaaataaataaaacaaacaaagctGTTGATGATGATATTGGAGAAAATGACGAAGTGATAAAGgaacatgaaaaggttatcaaACAATATGAAGATGATCATCCCActcaaataaatgaaacaaacaaagcAGTTGATGATAATAATGGAGAAAATGACGAAATGATAAAAGAATATGAAAGGGTAATGGAACGATATGAAGATGATCATCCCattcaaataaatgaaacaaacaacgcAGTTGATGATAATAATGGAGAAAATGACGAAATGATAAAAGAATATGAAAGGGTAATGGAACGATATGAAGATGATCATCCCattcaaataaatgaaacaaacaacgcAGTTGATGATAATAATGGAGAAAATGACGAAATGATAAGGCAGTATGAAAAGgataaaaatgatgaaaacaaaacagatgatgaaaacaaagaaaatgaagtGGTAAATCAGAAAAATGATATTCCCAgccaaaaaattaatgcaaataaagCGGATGTTGGAGTGTCAGGAATGGACAATGAAAACTTAAATCCAAAAGAGTGCACTCAAGAAACAGCagaaaatttttggtctttGCATTTATCGTGgccaagaaaagaagaaaaatcaggtatagagaaaagaaaatctgaaaaagttCCGTTTGCAATAACGTCAAAAAGATGGAGAGAAATACAAGCAGAAAAATCTAaagcaaaagaattaaaagaaaaggagatattgcaaaaaagacaagagaaagaaaaaaagaaaacaagtcAGATTTCCAGTACAGGAAGTACAACTAAAAGAAGATGTGAAGAAACTGCCACAAAAAAGAAGGAACCAAAAatcgtaaaaaagaaaaaaactgaaTCAGCAGCTGTCAATCCAACTTCCAGCAATGTGAAACATTCAAGTAAAGAgggaaataattcaaatgaggtaaataaatatgcaatcgGCGATTACGTAATTGTCTTATACGAAAAAATGCAATTCCCCGGAATAATAACAGATAAAGAAGGAGGAGAATACGAAGTAAGTGCATTGAAAAAAACATGCGATAGCACTTGGATATGGCCTAAACCAAAGGACCAAATTTGGTATCAGGAAGActctgttgttaaaaaaatagcaaagcCTATTTTCAacgataaaacaaaaagttttagtATCTCTATTTAA
Protein Sequence: MNAKKTSYTRFNYSEEDLRKALDSIKNGNMSLNAASKCFNIPKGTLHNKIKGKVLLQRKMGPESVLKPEDENRIEKWILDKAKLGFPMHPEDVKDAVQGILKALKQENPFADSRPGKKWLQLFLKRHPKICKRQTEIISKARASVTEDMIRSWFNELRDFLTEENCLDVLDNSNRVLNCDETGIQTCPKTGVLLGPKGYTNFYNIASGKEKESITVLCTFSAQGDVLPPMVIFPYKRMPNHIINSVPDDWAWGRSDSGWMVSATFYEYVANVLYPWLLKQETKFPVIFFLDGHKSHLSIELCDFCIEKKIILYCLPPNATHIVQPCDVAIFGPLKVFWKQVVRKHKQNSGKDITKSNFCTIFKDAFDKAVKKETIQNGFRVCGLYPFSPDSVDYSKCISQRRQELQKSQVRDISNEDYAVATRVIEKIIGPERSLEFEQKKSSTLNKNVESIFDVWLSCKKHTLEENGTLVDNYKEHDNDELFDITSLPVDIIDDNYLLQANSEIEDITSLIEEDEINSFHNLVLDNNLNTVVEENKRNEELKQHKKSEDSNQVNENLKAINNENKENEHVINEYAYDHPIQINKTNKAVDDDIGENDEVIKEHEKVIKQYEDDHPTQINETNKAVDDNNGENDEMIKEYERVMERYEDDHPIQINETNNAVDDNNGENDEMIKEYERVMERYEDDHPIQINETNNAVDDNNGENDEMIRQYEKDKNDENKTDDENKENEVVNQKNDIPSQKINANKADVGVSGMDNENLNPKECTQETAENFWSLHLSWPRKEEKSGIEKRKSEKVPFAITSKRWREIQAEKSKAKELKEKEILQKRQEKEKKKTSQISSTGSTTKRRCEETATKKKEPKIVKKKKTESAAVNPTSSNVKHSSKEGNNSNEVNKYAIGDYVIVLYEKMQFPGIITDKEGGEYEVSALKKTCDSTWIWPKPKDQIWYQEDSVVKKIAKPIFNDKTKSFSISI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00977391;
90% Identity: iTF_00977391;
80% Identity: -