Basic Information

Insect: Melanotus villosus
Gene Symbol: -
Assembly: GCA_963082815.1
Location: OY720426.1:42393651-42395705[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.8e-10 2.4e-08 36.0 0.1 3 40 17 54 15 58 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.8e-10	2.4e-08	36.0	0.1	3	40	17	54	15	58	0.90

Sequence Information

Coding Sequence: atgccaCGAAATCGAACAAAAACCTCAAATCGCTGCAATTATAGTATTGATTCAATGCAGAATGCGATTGAGGCGGTAAAGACCGGTCGAATGAGCCAAAGTGTAGCAGCAAACCATTTTGGAGTACCAAGAGGAACGTTAGCAAAGAAACTGACAGGGCACTCTTCAGCCACATCTCATGGTGCCGGCCGGCCCACGGAATTGTCATTGGAAACTGAGCAGAAATTggtaatatatttaaaagcatGCGCAAACGCCGGAAGTGGCTTAACAAAAGTTGATCTATTGGATTTGGTCCACGAGTATTGCGAAAAAGAAAGTATTGAGACAAGATGGAATAACAACCGTCCTGGAAACGATTGGTTTGCGTTATTCTTGAAAAGACATTCTGATCTATCAGTACGCAAAGGAGAAGCATTGTCTCTGAAACGGCTAAAGAGTGCCGACCCATTCATTGTCCATAAATTCTTTGATGACCTCCAAGATATATATGCAAAAGAAAGCATTGATGATCCCAATTTGATATATAATTGCGACGAAACGTCTTTCCACCACGATCCCCGTGATGTCAAAGTTGTAGCTCAAAAGGGAAAAAAGAAGATTTCACAAAATATAGTGGGGTCAGGCAAGGAGACCACTACAGTACTGGCATGCGGAAATGCAAGTGGTGGCCTTCTGCCTCCATTCATAGTATTTAAAGGTGCGTACATGATGAAAGACTGGTTTTCAGAGCATGAAGAAGTATATCCTGGTACTGCGATAGCTGTAAGTgcaaatggatggatggacaCTACAGTATTCACCAAATGGTTTACACAAGTATTTCTAAGAAATGTTCCATCAAAAGAAACACGAAATGGGAAGAAAATCATTCTCTACTTTGACGGTTACCGTTCACACGTGAATTACGATATCGCAAAAGCTGCTCTCGAAAATGATGTAATCCTCATAAAATTTCCACCCAATCTAACACACCTGCTTCAGCCTTTGGACAGGACTTGTTTCAGACCACTAAAGCAAGCCTGGAACGTGGTACTCGCAACGCACCAGAAAAACCACTCAGAGCGCTTGCATAAGCATATGTTCATGCGATTACTAGGACGTGTATGGTCAAAGTCTTTTAAAAAAGATCACCTTGAATCAGGATTCAAGACAACCGGTTTGTTTCCACTTAACAGAAAAATGTTCCCTGAAGAGGAGTTTGATCCTAATAGTTTAAATAGGCAAAATGGAGGTGTGCCTGATGCTCAAGAACAAGCTACAACTATAACTGCTGGATCTAGCAAAGCAACTGACGAAAACGATAGTATCACTTCTACAGTTCTACCAGAGTATGATGCACCAGTTGCTGAAGAAACTGCTGGGTGTAGTATCGaaaattcatttgaaaattttataaaggaaaaGATTTACACATCActcaaacagaagaaaaacaatgcCACGCAgccaaaaacgaaaaattcacGCGTTGCTGAGTATGGCGAGATTTTAACTCATGCAGAcgtattaaaaaagttagaaatacaagaacaaattaaaaacaaaaagcaaaaacagcaaaagaagaggaagaacaaCTCTAAAAAGAGGAAAAGAGAACCTACACCAGAAACAAGCACAGATAATGAAACTGAACCTGAATATATAGATTCCAGTGATGATTTGAACgttttagaagaagaaaatgaattgGATAACCAAATCATAGAAGTAGACAATGTACATCAAGAGAAATGTGTAGAAAACCGTTTTCAACTACCAGCTTCCTCACtgcatttaaacaaatattattcaGTGTTTTATGATGACAAATGGTATCTTGGTCAGATAACTAGTTTTGCAGATGAACAAAACACTATGGCatatatgaaatttttaaaagaatttcaacCAGGTGTATTTAAGTGGCCAAAACGTGCTGATGAAAGTATTGTTGCTagagaatacattttttatgggccagtTGAACTTGCCGGGGAAGGACCTTTTACTACAGATCAAATGCAGTTAATATCCATTAAGTATCGCACAATGAAGAAGTATATTACATAA
Protein Sequence: MPRNRTKTSNRCNYSIDSMQNAIEAVKTGRMSQSVAANHFGVPRGTLAKKLTGHSSATSHGAGRPTELSLETEQKLVIYLKACANAGSGLTKVDLLDLVHEYCEKESIETRWNNNRPGNDWFALFLKRHSDLSVRKGEALSLKRLKSADPFIVHKFFDDLQDIYAKESIDDPNLIYNCDETSFHHDPRDVKVVAQKGKKKISQNIVGSGKETTTVLACGNASGGLLPPFIVFKGAYMMKDWFSEHEEVYPGTAIAVSANGWMDTTVFTKWFTQVFLRNVPSKETRNGKKIILYFDGYRSHVNYDIAKAALENDVILIKFPPNLTHLLQPLDRTCFRPLKQAWNVVLATHQKNHSERLHKHMFMRLLGRVWSKSFKKDHLESGFKTTGLFPLNRKMFPEEEFDPNSLNRQNGGVPDAQEQATTITAGSSKATDENDSITSTVLPEYDAPVAEETAGCSIENSFENFIKEKIYTSLKQKKNNATQPKTKNSRVAEYGEILTHADVLKKLEIQEQIKNKKQKQQKKRKNNSKKRKREPTPETSTDNETEPEYIDSSDDLNVLEEENELDNQIIEVDNVHQEKCVENRFQLPASSLHLNKYYSVFYDDKWYLGQITSFADEQNTMAYMKFLKEFQPGVFKWPKRADESIVAREYIFYGPVELAGEGPFTTDQMQLISIKYRTMKKYIT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00977368; iTF_00977358; iTF_00977359; iTF_00977360; iTF_00977361; iTF_00977362; iTF_00977426; iTF_00977363; iTF_00977364; iTF_00977365; iTF_00977366; iTF_00977367;
90% Identity: iTF_00977368; iTF_00977358; iTF_00977359; iTF_00977360; iTF_00977361; iTF_00977362; iTF_00977426; iTF_00977363; iTF_00977364; iTF_00977365; iTF_00977366; iTF_00977367;
80% Identity: iTF_00977368;