Basic Information

Insect: Melanotus villosus
Gene Symbol: -
Assembly: GCA_963082815.1
Location: OY720423.1:62684385-62689443[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.8e-10 3.9e-08 35.3 0.0 1 38 366 403 366 409 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.8e-10	3.9e-08	35.3	0.0	1	38	366	403	366	409	0.94

Sequence Information

Coding Sequence: ATGGAACAAGACATTATTATTGATGGATTTAATCGTAGTGAAAAAGATTATGGTCTGCGTTATAAATTTATGATAGGTGACGGTGATTCAAGTGTGTATGCCAAAGTGTTACAAAACGTTTCTTATGGTCGTTCAGTGCAGAAATTAGAGTGTGCAAATCATATCACAAGGGCACGCATTTTAAAATCTAGGATCACTAGATTTACAATTGACGTTAGGACTGCTATAGCACGATCAAATAATACAGCATTGTTGAAACAAGACCTTAAAAATCTTCCGTTCCACATATTTGGCTCTCATAACAACTGCAGGCCAGaaGGTAATATATTCGAAGAGATACAAAGAAGTATAGATAATATTGTAAGGAAAGCAGATCGCTTAAGAAGAAATGTTACAACCAATTATGCGGAAAGATACATGTCCTTAATCGCTAAATTTTCCGGGGGAAAACGTGTTAATTATACAACTGCAGGTTCGTATCAAAGGAGGTGTATTAGAGCAGCTTTAGCTTACAACGGAGGACCATTTTGGCACCTTTCtatgttgcaaaataaatacatatcgAAACTTTGTGCTAAACGGGAGCGCTTACGTTTACACATAAACAGCACTcgtaaaaataggaaaagaaaacGGCAAACTACAAAAGGCGATACTGATATTAATTATGGCCCGGAATCATATACAGCATTACCAGATGTATCTGAAGACATACTTCAAgctagaaaacaaacaaaacttttacAGCTTCAAAACGATGCTGAAAATGCTACTGAAATAGAAAGGGCAACCGTAGGGCAACATCATAATTCATTGTGGTATGATACAAGAAGAGATCGGCTTACTGCATCAATCTTTGGAACTATATCACCTCTCAGATATGGTAGGCTGCACGAATCTTCAGCCTGTAAGGCATTTACGGAAAAATTAGGTTTAGAAGTTACACCGTGTGGCATTTTTATAGACAAAGAGAATCCATTCCTCGGCGCTTCACCAGACGGTTTAGTGGGTGATGACAGTGTAGTGGAAATTAAATGCCTGTATTCTATACGAAATGAAAACATGGGGAGAAAGGCGGTTGATGTAAGAACATGGTCAGAAGAGAATTTGAGAAAAGCCATTGAAGCTGTTGAAAGTAAGAGCCTGGGGGTGAATGAAGCTAGTCGAACTTATGATATTCCATCAAGAACTTTGAGAAGACACATCTCCAAAGGATGGATAAGCAAGCAACATGTGGGAAGACCATTAGATTTAGGAAAGGAAAATGAGTTAAGACTTGTGGCACACATCAAGAAGCTTCAATCAGTCGGTTTTCCTTTGGAGCAGAAAGACCTACAACGGATTGCTTATGATTTCGCGGAGAAATTGAACTTACCACACAGATTCAACCAAGAAAAGAAAACGGCAGGCTGGGACTGGCTTCAAGGGTTTATGGTTCGAAATCCTGAGATTAGCATTCGGAAAGCAGAGGGTTTGTCATTAGCAAGGGCTAGTGGAATGAATCGTAATGATGTGGATGAATATTTCCAGATCCTTCTAAAGATtttgactgaaaataatttgattggCAAGCCTGACAGAATTTACAACATGGATGAGTCAGGCATTCAGGTTAATAACAAACCATCACGAGTGCTTGCTGCCAAAGGGAGCAAATGCGTTAGTTCTGTAACTAGTACAGAGAAAGGAGAGACTATAAGTTTGATTGCGTGCTGTAATGCTGAAGGCACTTTTCTACCACCAGTTTTAATAGTAAAGGGGAAATATAAAAAACCAGAGTTTTCTGAAGGTCTTCCACCAGGATCAGAGGTTTATATGAACCAGCGGTCATCGTATATTAATGCAGAGTTATTTCTGAAGTGGCTCCAGGAACATTTCCTTCCGAGAAAAGGCGATGGCaaagtattattaatattggaTGGGCATGCTTCTCATTCCAATTCATATGAAATGTTAGAAGTGGCCAGAAAAAACGACGTGATTATTTTGTGTCTTCCCAGTCACACGACTCAAGCCCTCCAACCATTAGACAGGACTTTTTTTAAACCCTTTAAGACCTATTTCAACCAAGAAACAAAGACGTGGTTCATAAATAACAAGGGAAAGCAATTAAGCAGATATCATGTTTCACAAATGATCGGCGCTGCATGGTATAAATCCGCAATCCCAGCTATTGGCGTTACAGCATTCAGAGCAACTGGAATATGTCCATACAATCCAACTGCTGTGCCagattattttttcaacatCTCTGATGCTGtaaatcaacaaacaaatgTCGGTAGTTTGCAGGTGACAGCCAACCCCCTTCAGAATATTACCAAGCTTCCGTTGCCAAGCACTTCAAACTCTTCAGATTGTTTGGAAAACAACATGAATATCCAGCCATCTACTTCTTGGGCTACTGACAACcaagaaaattctggaaatgtCGCTGTAAAAGACGTTTTGACAGTCTCCACTAGCCAACTAAAAGAGACTCCAACCAAAACATTGAATGAAATAAGCCCATTACCAATTATGAAACCAAGATTAAGCAACAGAAAGCAAAATACCAAGATTTTGACGTCTGACGAACATCTTACCGTTCgtaaactttttgaacaaaagAGGTCTTTAAAGATGCGACAAAAGGGTTTGATTCCATCGAAACGTAAAATAGGACCGATCAAGCAAGCTTCATCTTCATCAGAAAGTGATGAGGAAGTAGTATTTTCATCTTCCGTTGAAGAATGTTCGGATGAGAGTGAAGATGCTTGCATGGAGTGTAACGAGTCATACTATCCCACAAAATCGAAATGTGACTGGATAAAGTGTGTTTCATGCTCGGTATGGTTACACGAAGATTGTACTACATTTGTGGATAAATGTAAGAAGTGTGGtatcaagaataaaggaaaaggaagagGAAAGAAAGCGAAAAAATGA
Protein Sequence: MEQDIIIDGFNRSEKDYGLRYKFMIGDGDSSVYAKVLQNVSYGRSVQKLECANHITRARILKSRITRFTIDVRTAIARSNNTALLKQDLKNLPFHIFGSHNNCRPEGNIFEEIQRSIDNIVRKADRLRRNVTTNYAERYMSLIAKFSGGKRVNYTTAGSYQRRCIRAALAYNGGPFWHLSMLQNKYISKLCAKRERLRLHINSTRKNRKRKRQTTKGDTDINYGPESYTALPDVSEDILQARKQTKLLQLQNDAENATEIERATVGQHHNSLWYDTRRDRLTASIFGTISPLRYGRLHESSACKAFTEKLGLEVTPCGIFIDKENPFLGASPDGLVGDDSVVEIKCLYSIRNENMGRKAVDVRTWSEENLRKAIEAVESKSLGVNEASRTYDIPSRTLRRHISKGWISKQHVGRPLDLGKENELRLVAHIKKLQSVGFPLEQKDLQRIAYDFAEKLNLPHRFNQEKKTAGWDWLQGFMVRNPEISIRKAEGLSLARASGMNRNDVDEYFQILLKILTENNLIGKPDRIYNMDESGIQVNNKPSRVLAAKGSKCVSSVTSTEKGETISLIACCNAEGTFLPPVLIVKGKYKKPEFSEGLPPGSEVYMNQRSSYINAELFLKWLQEHFLPRKGDGKVLLILDGHASHSNSYEMLEVARKNDVIILCLPSHTTQALQPLDRTFFKPFKTYFNQETKTWFINNKGKQLSRYHVSQMIGAAWYKSAIPAIGVTAFRATGICPYNPTAVPDYFFNISDAVNQQTNVGSLQVTANPLQNITKLPLPSTSNSSDCLENNMNIQPSTSWATDNQENSGNVAVKDVLTVSTSQLKETPTKTLNEISPLPIMKPRLSNRKQNTKILTSDEHLTVRKLFEQKRSLKMRQKGLIPSKRKIGPIKQASSSSESDEEVVFSSSVEECSDESEDACMECNESYYPTKSKCDWIKCVSCSVWLHEDCTTFVDKCKKCGIKNKGKGRGKKAKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -