Mvil063645.1
Basic Information
- Insect
- Melanotus villosus
- Gene Symbol
- -
- Assembly
- GCA_963082815.1
- Location
- OY720423.1:61856133-61859228[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.00089 0.12 14.5 0.0 18 39 70 92 56 96 0.82 2 2 1e-07 1.4e-05 27.1 0.0 1 42 205 246 205 249 0.90
Sequence Information
- Coding Sequence
- ATGAATGATCAATATGAGGACAGTGATGATAATGAAACGAATGATCAATATGAGGTTAGTGTCGAAGTAAAAGCAGATCCAGAAGTAACTGTTAACGAACAAGTAAATAtgggaaaatataaaagaacatTTGGTAGCAGGCGATACGCTGATTTTGACCTGAAGAATTTGGACAGAGCCGTAGAGGACAGAAAAAGACTTGGTAAATCATATAGATATTTAGCCAAAAAGTATGGTATATCTCGATCTACAATTCTGAGGAAAGTGAAAAACCTTAATCTGCGCAAGCCAGGGGGTCAGACAATACTCTCAGGTCAGGAAGAGCAGAGAATAGTAGAAAACATAGATATAGCCTGTCGGTGGGGATTTCCATTCACAGCAAACGATTCTTGCATAGAAAATAACATAAGATTCATCTTGTTACCACCTAATTCTACAGATGTTTGTCAACCACTGGATGTGGCATATTTTAAGCCTCTAAAATCTTCCTGGAGGACCGGTCTTTTAGACTGGAAACTTAAAAACAAGGGAACTGTTCCAAAAGATGTTTTTCCTCGACTCCTCCATAACGTGATGAGTGAACCAGAGAACAGCAGAAAACGTAAGCAGTGGGACGAGGAACAGATGGAGCAAGCCATAAAGAGTGTTAACAGTGGCACCATAGGATGGAAATTAGCGTCTGAAACCTTTAACGTGCCGGCAACCACTTTACGAAGGAGATGCAAAAATAATATGGGTAGTCAAAAGGGTGACCTAGGAGGATTAAGACCGACCTTTGCAGGGGCAATAGAATCAGAATTACTTTCCCACTTACAAGAATTGGAAACACGTTTCTTTGGATTAACAACCACTGGAAAACCGGAAAACACTTCCCTTGCTGAAAAATCACCCCGGAAGACCAGTCGCAAACCATCCAAATTGGGCGTGGTAAATTCGACGCCAGATGTCGcagaagcaaaagaaaaggaGGCCGAAAAGCAAATAACAGAGAGACCCAAATTAGCAAGAAACGCAAGGAATAATATTACTACCCTAACAGAAAGTGACGAtaaactttcatttaaaaatatggaatCTGATAATGAGTCTGATTGTGCTTGCATTTATTGTAATGACTTATATTCACACTCCAAAGCAAATGAATTCTGGATGCAGTGTCAAAATTGCAAAACCTGGTGCCATGCAGACTGTGCTGGTGTAAATCGTCGAACCAAAGCATTTACATGTGACCTCTGCAAATAA
- Protein Sequence
- MNDQYEDSDDNETNDQYEVSVEVKADPEVTVNEQVNMGKYKRTFGSRRYADFDLKNLDRAVEDRKRLGKSYRYLAKKYGISRSTILRKVKNLNLRKPGGQTILSGQEEQRIVENIDIACRWGFPFTANDSCIENNIRFILLPPNSTDVCQPLDVAYFKPLKSSWRTGLLDWKLKNKGTVPKDVFPRLLHNVMSEPENSRKRKQWDEEQMEQAIKSVNSGTIGWKLASETFNVPATTLRRRCKNNMGSQKGDLGGLRPTFAGAIESELLSHLQELETRFFGLTTTGKPENTSLAEKSPRKTSRKPSKLGVVNSTPDVAEAKEKEAEKQITERPKLARNARNNITTLTESDDKLSFKNMESDNESDCACIYCNDLYSHSKANEFWMQCQNCKTWCHADCAGVNRRTKAFTCDLCK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -