Mvil092195.1
Basic Information
- Insect
- Melanotus villosus
- Gene Symbol
- -
- Assembly
- GCA_963082815.1
- Location
- OY720427.1:14910968-14920653[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-05 0.0018 20.4 0.4 1 24 17 40 17 42 0.96 2 2 4e-07 5.5e-05 25.2 0.0 3 38 447 481 445 483 0.94
Sequence Information
- Coding Sequence
- ATGCCGACTGTTTATAAGAGGAAAGGTGAAAATCAACGAGCTTCGTGGACTGAAGAACAACTTCGGGCAGCTGTACAAGCTGTGAGAAAAAAGGAAATGGGCGTAAACGAGGCTGCCAGACGTGGTTTTAGCGGATTATATAGCGTGTCATCGTATACTGTTGAAATTGACAATGGCAGTCTACTGGAATCCGATGATAGGTACGATGATACAATTTGTGCCGAGTCCCCACTTGGCGAAATGCGTGTACAAGGACAGGGTAGTGAAAGAAAACTCTGGACACGGCATTGGGAATATTTTGATGCTCTTCACAGGATCATGCATAAAAAAGCTGAAATTTCAGCAGTTGCTACTTGCAGCAGCACTGCAGGACTTGTTATTGGTGAAAACCTGGACATTAGCCGTAGCACATCAAATAGCCCCCATCTAAATCCTGAAAGTAGCGATGGAGAAAACATCCCGACAACACCAAGTACAGTTGGTCAACGAATTGCAGAAGGCCGAGGAGAAGAATGCTCCAAAAAACGGGTAACCACAACTAAAGAGGTAGATGCCCACAAGACGACGGACCACGCGACCAATAAGGACATGATTATTGggaaagaagaagaactagtAACAGAATTCAATAAAGCAGGGTTAAATATATTAGGCCTAACAGAAGCAAAACAAAATGACAAAGgctgtaaaataataaaggatGAGCACATTTTGTTTTATAGCGGTGTAGCAATTGAAAAAAGGGCAAAATCGGGAGCagcttgtttaataaaaaactcCCTAAAACGCAACGTAAGCGAATGGTCCTTTGTATCGGACCGTATCCTAAGAATAGAAATGATTGTAAACAAACAAGCACTAAGTATAATTGTTGTTTACGGTCCATTAGAAACGGAAAGTGATGAAACAAAATCcgaattttatgaatttttacaaGTAACTGCCGATGACGCTaaagAAGATAAGGAGGGAAATCTATTAACAAATGAAGATGACATCATGAATAGATGGAAGGAATACTTCTCGGATTCATTAGGTCAAACACCTGCCGCAATAGAAATCGCTGAAACTGAGATTACACCTGAAATACGAGATAACACAGACAATGACATCACATTACAAGAATTGGAACTTGCAATCCgaagattaaaaattggtaAAGCGTGCGGCCACGACAATGTTACACCGGAAATGATCAAATTTATCGGACTAGACGGGATGCTACTTCTACTTTTTAGACTACTCAATACAGTTTGGAAATGTAATCAAATCCCAAAAGACTGGGAAGTAGCGATGCCGACATACCAACTTAAAACAACAAAGGCGCAATGGGGTGCAGAAACCATGATTCAGGctatacaatttattgaaaatggaGGATCAATACGGCAGGCTGGTAGAAGGTTCAATATCCCAGAGTCGTCGattcgaaaaagaaaaaaagcatATGACGATGGACTTGATGTAGTAGGACCACATATTGGCAAGTACTGTGTCTTCTCACCCGTCCAAGAAAAGGCGTTAAAAGACCACGTTCTTAAGTTAGCAAAACTTTATCATGGAATGACTAAAGTTCAACACAGAAAATTAGCATTTTCCTTTGCCGAATCCAACCAAATAAAACACAACTTTAAAGTTCAAACAAAAATGGCCGGAAAAGATTGGTATTATGGATATCTCAAGATAAAGCCACAGATAAATCTCAGCTTTTAA
- Protein Sequence
- MPTVYKRKGENQRASWTEEQLRAAVQAVRKKEMGVNEAARRGFSGLYSVSSYTVEIDNGSLLESDDRYDDTICAESPLGEMRVQGQGSERKLWTRHWEYFDALHRIMHKKAEISAVATCSSTAGLVIGENLDISRSTSNSPHLNPESSDGENIPTTPSTVGQRIAEGRGEECSKKRVTTTKEVDAHKTTDHATNKDMIIGKEEELVTEFNKAGLNILGLTEAKQNDKGCKIIKDEHILFYSGVAIEKRAKSGAACLIKNSLKRNVSEWSFVSDRILRIEMIVNKQALSIIVVYGPLETESDETKSEFYEFLQVTADDAKEDKEGNLLTNEDDIMNRWKEYFSDSLGQTPAAIEIAETEITPEIRDNTDNDITLQELELAIRRLKIGKACGHDNVTPEMIKFIGLDGMLLLLFRLLNTVWKCNQIPKDWEVAMPTYQLKTTKAQWGAETMIQAIQFIENGGSIRQAGRRFNIPESSIRKRKKAYDDGLDVVGPHIGKYCVFSPVQEKALKDHVLKLAKLYHGMTKVQHRKLAFSFAESNQIKHNFKVQTKMAGKDWYYGYLKIKPQINLSF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -