Basic Information

Gene Symbol
Kdm5a
Assembly
GCA_963082815.1
Location
OY720427.1:33529533-33543075[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.7e-16 8.8e-12 47.7 0.0 26 89 2 62 1 62 0.95

Sequence Information

Coding Sequence
ATGGTTGAAAAGAGAGCATTGGATCTCTATACCTTACATCGACTTGTTCAAAGAGAAgGAGGTTCTGACATAGTATCGAAGGAGCGAAAATGGTCTAAAATAGCTGTTCTTATGGGTTATCCCCCTGGAAAGGGAATAGGAacgatattaaaaacacattttgaaaGACTTCTATATCCTTTTGATGTTTTTACACAAGGAAAAACTGTTAGTATTAAAGTTGAACTTGATTCTCCTGAAAATccagaacaaaaaatagaaagagaTAGAGATTATAAGCCTCATGGTATAGTGGGACGAATGACAGTTAAGCCTCCTACAGATAAACATTTTCGTCGTTCCAAGAGATATGAAAGTGATCCTGACGCTAAAATTGAAGCTAAACCGGAGTGTTCTACAAAAGTTAAGGAAGAACCTGTAGAAATACCCGAAGCTGAACAAAATAAGGAATTAAAACGGCTTCAATTTTATGGGGCTGGCCCAAAGATGGCTGGCTATAATCTTAAAAATGAGGAGAAAATTCGGATCAAGTCTATAAACTATGATTTTGATCCACTGGCTAAGTACGTCTGTCATAACTGTAACCGTGGTGATGTTGAAGAGTCGATGCTTTTGTGTGATGGATGCGATGACAGCTAtcatacattttgtttattaccACCGTTGACAGAAATACCAAAAGGAGATTGGCGTTGCCCTAAATGTGTAGCGGTAGAAGTCTCAAAACCAACCGAGGCCTTTGGTTTCGAACAGGCCCAGCGGGAATATAGTTTACAGCAATTCGGTGAAATGGCTGACCAATTTAagtctgaatattttaatatgccTGTGCATCTGGTGCCGACACATGTTGTAGAGAAGGAATTTTGGCGAATTGTTTCATCAATAGATGAAGACGTAACAGTAGAATATGGTGCGGATTTGCATACAATGGATCATGGCTCCGGATTTCCAACAACGACTTCCCTGAATTTGCATCCTGGAGATATAGAATATGCGTATTCAAGTTGGAATCTAAATAATTTGCCAGTATTGGATGGCTCGGTGTTAGGATATATTCATGCCGATATTTCTGGCATGAAGGTTCCTTGGATGTATGTTGGTATGTGCTTTGCAACCTTTTGCTGGCATAACGAAGATCACTGGAGTTACTCCATTAATTATTTGCATTGGGGCGAACCAAAAACTTGgtatGGCGTACCAGGTAGTAAAGCAGTGGCTTTCGAAGAGACAATGAAATTAGCTGCTCCAGAATTATTCCACTCACAACCTGATTTGTTGCATCAATTAGTTACCATAATGAacccaaatattttaatgaatgcTGGCGTGCCAGTTTATCGAACTGATCAACATGCTGGTGAGTTCGTAGTAACGTTTCCTAGAGCTTACCATGCGGGTTTCAATCAAGGGTATAATTTTGCTGAAGCTGTGAATTTCGCTCCAGCAGATTGGTTAAAGATGGGACGTGAATGTATCCTGCATTATTCCTTTTTAAGACGCTTCTGTGTTTTTTCTCACGATGAATTAGTCTGTAAGATGGCATTAGAACCTGATAAACTAAGTCCGTTAATTGCAGCTGCTACGTACCAAGATATGTTGCAGATGGTTGATACTGAAAAGAAATTACGGAAGAACCTTTTAGACTGgggAGTAACGAGTGCGGAGCGAGAAGCTTTTGAATTATTACCAGATGATGAAAGACAATGCGATGTTTGTAAAACCACATGCTTCCTGTCAGCTATAACCTGTAGCTGCATATCCGATACATTAGTATGTCTTCGTCATTATGCCGAACTATGTAAATGTCCTCCTAGCAAGCACACTTTGCGATATCGTTACACCCTTGATGAGCTGCCACGtatgttacaaaaattaaaaattaaagcggAAGCATTCGATGTATGGCTAAATAAAGTTCGTGATTCATTAGATCCTAGTGTTCCATCTACCTTAAGTTTGTACGAATTAAAGGGCTTATTAACCGAAGCTGAAGACAAAAAGTTTCCAAAGTGTGAGTTGCTTACGACTTTAGCCAATGCCATAGAAGATGCTGAAAAATGTGCAAGCGTGATTAGACAATTGGATTCTACAATGGCACGAACACGTACACGTAATTCTAATGACAGAAAGTATCATTTAAATTTGGAAGagcttaatttgtttattggtgAGATTGATAGTTTAGCATGCTTATTAGAAGAAGCAAAAATAGTGAAAGATTTATTGAACGAGTCCAATAAATTCGAAGAAAGTAGCAAGGATTTATTGAGCGTGTCTTTGAAGAAGTGCCCCGtcgaagaaatagaaaaatgctTGGAACACGGGGAAGCCATTTGTATCGAGTTACCCTCTTTACAGGCTATGCGTCAACGTTTACGTCAGGCAAAATGGATGGGCGAAGTATTATCCGTACGTAATAAGTCTGAAGTCATAAAATTGGAGACAATTCGTAATCTTTTAAGTTCAGGAGAGCTGATAAATCCGGATTTGCAGATAGAAGCTGAATTACTagaattacgaaatttattattaaaaagcgAAGAATGGGAAGAAAGAGctcaaaatttacttaaaacacCTCCACCTAATTTAATGGCAGAAATTGAAACATTACTTACCATGGCTGAAGATATTGAAACTTTCCTTCCGACTGAAAGGTTTCTTTCAGAAGCTATGAATAGTGTTCGGcaatggattaaaaatttagacGAAATAAATGCCGCCGAATTCTATCCGTACATCGACGTCATTGAAAATCTAATACAGAAAGGTCGATTGATTCCTTTACCGATACCTGATGTTCAGGATTTGGAACAATACGTAGTGGCAGCTTACGGGTGGAAGGAAAAGACGAGTAGGACATTTCTACGAAAAAATTCTAACGTTAGCTTAATGGACGCTTTGTCTCCTCGATTGCCTGCCAATTTAATGGCCGGCGCTAAAAATCGACGAAAGGTTGCGGACGAAGAATTGCCACTTTTTAAAGTGACGAACGAAATGGATCCAGTCGATGttgtgaataaatttaaacaagctGAAGAGCGTGAATTAGAGGGGATAAAAGCCCTTCGAGctcaaaatataacaaaaacgtTCAACTCCATCGAAGAACATAAGTTTTGCTCATGTCAACGAGGTGCCTTTGGTTTAATGATGAGATGCGAATTATGCAAAGATTGGTTCCATTCATCGTGTGTAACGTTACCAAAAATAGCCAATATTAAGATTAAGGGGAACTTTACTGCCATTGCACTTCGCATGGGTTTTAAGGATTCCAAATTTTTATGTTCCGTTTGTCACCGCACAAAGCGTCCGCGTCTCGAAACTATCCTAAGTTTATTGGTATCGTTACAAAAATTATCCGTCCGTATTCCAGAAGGAGAAGCACTTCAGTGTTTAACTGAACGTGCTATGACCTGGCAAGACAGAGTTAAACAGCTATTACAAACCAACGAATTTGAAGCTGCTGTTGCCAAATTGTCACTATTATCCCAAAAAAATTCGGAAGCAGCCGCTcggcaaaaaactgaaaaaatcatCAGTACTGAACTTAAAAAAGCAGCAAGTAATCCGGACTTGCAACAACACATGCAAGAAATTGCTTCTTGGAGCGGCATTAACTCTGAAGATCATTGTGATAGCAACAGCTCTCACGGAAATGACGGAGGTGACGCTTCTAAAGTCACATCTTCCCTTCCCGATGATACAGTCGATGAACATGCATATTCCTTACACTTTCCTAATGCAGACGATGACTGTATGCTACAATTTAGTGCAGAAGCACGTCGACAACTAGAAGATATACTGATGGAGGGTGATCTTTTAGAAGTTTCGCTTGATGAAACTTTACATTTATGGAAACTTTTACAAGCTTCTCGAGATCCAGATAACGAACTTGTGCTGATTGACTTTGATGCTCCAGGAAAAATGTCACCAGTTAGAAAAGGACGTAAACGTCGTTCAGACGAAGGTGatgctaataaaaaattaaagcagattAAGAGTGATTTAGATAAAAAGATAACCAAACGTAAAACCAAAGATGTAACTGTTCGTAAACGTGGCAATATAACAAGCCGCAGAGGACGTGGCCGCCACACCCATAGTAGTTCTGACGAAGAAGATTTGGAAGAACGATGTGCTTCTTCAAGTTGTCTTCAACCATCCGGTCAAGAAGTTGATTGGGTTCAGTGTGACGGGGGATGTGAACAATGGTTCCATATGGCATGTGTTGGTTTGTCGGCTCAAGAAATCACCGAAGATGAGGACTATATTTGCATGCTGTGTTCGCAAAGCAATTCTGCTTTTGGCAGTTTGCAACAATCACCAGAAAGTCAATCATCCGATAATCCATTATCTCCAGATTCAACGCAACCCTCTTCTGTACAGAAAGAGGGCGTTTAG
Protein Sequence
MVEKRALDLYTLHRLVQREGGSDIVSKERKWSKIAVLMGYPPGKGIGTILKTHFERLLYPFDVFTQGKTVSIKVELDSPENPEQKIERDRDYKPHGIVGRMTVKPPTDKHFRRSKRYESDPDAKIEAKPECSTKVKEEPVEIPEAEQNKELKRLQFYGAGPKMAGYNLKNEEKIRIKSINYDFDPLAKYVCHNCNRGDVEESMLLCDGCDDSYHTFCLLPPLTEIPKGDWRCPKCVAVEVSKPTEAFGFEQAQREYSLQQFGEMADQFKSEYFNMPVHLVPTHVVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTTTSLNLHPGDIEYAYSSWNLNNLPVLDGSVLGYIHADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSKAVAFEETMKLAAPELFHSQPDLLHQLVTIMNPNILMNAGVPVYRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECILHYSFLRRFCVFSHDELVCKMALEPDKLSPLIAAATYQDMLQMVDTEKKLRKNLLDWGVTSAEREAFELLPDDERQCDVCKTTCFLSAITCSCISDTLVCLRHYAELCKCPPSKHTLRYRYTLDELPRMLQKLKIKAEAFDVWLNKVRDSLDPSVPSTLSLYELKGLLTEAEDKKFPKCELLTTLANAIEDAEKCASVIRQLDSTMARTRTRNSNDRKYHLNLEELNLFIGEIDSLACLLEEAKIVKDLLNESNKFEESSKDLLSVSLKKCPVEEIEKCLEHGEAICIELPSLQAMRQRLRQAKWMGEVLSVRNKSEVIKLETIRNLLSSGELINPDLQIEAELLELRNLLLKSEEWEERAQNLLKTPPPNLMAEIETLLTMAEDIETFLPTERFLSEAMNSVRQWIKNLDEINAAEFYPYIDVIENLIQKGRLIPLPIPDVQDLEQYVVAAYGWKEKTSRTFLRKNSNVSLMDALSPRLPANLMAGAKNRRKVADEELPLFKVTNEMDPVDVVNKFKQAEERELEGIKALRAQNITKTFNSIEEHKFCSCQRGAFGLMMRCELCKDWFHSSCVTLPKIANIKIKGNFTAIALRMGFKDSKFLCSVCHRTKRPRLETILSLLVSLQKLSVRIPEGEALQCLTERAMTWQDRVKQLLQTNEFEAAVAKLSLLSQKNSEAAARQKTEKIISTELKKAASNPDLQQHMQEIASWSGINSEDHCDSNSSHGNDGGDASKVTSSLPDDTVDEHAYSLHFPNADDDCMLQFSAEARRQLEDILMEGDLLEVSLDETLHLWKLLQASRDPDNELVLIDFDAPGKMSPVRKGRKRRSDEGDANKKLKQIKSDLDKKITKRKTKDVTVRKRGNITSRRGRGRHTHSSSDEEDLEERCASSSCLQPSGQEVDWVQCDGGCEQWFHMACVGLSAQEITEDEDYICMLCSQSNSAFGSLQQSPESQSSDNPLSPDSTQPSSVQKEGV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00398621; iTF_00788306;
90% Identity
-
80% Identity
-