Basic Information

Insect: Melanostoma scalare
Gene Symbol: salm
Assembly: GCA_949752695.1
Location: OX456986.1:13947766-13989305[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 8.3e-06 0.0021 20.3 0.9 1 23 1492 1514 1492 1514 0.98

2 7 1.6e-05 0.0042 19.3 2.1 1 23 1520 1542 1520 1542 0.98

3 7 0.028 7.1 9.2 1.5 2 23 1877 1898 1876 1898 0.98

4 7 1.2e-07 3e-05 26.1 0.5 1 23 1904 1926 1904 1926 0.98

5 7 0.00036 0.093 15.1 2.3 1 23 1936 1958 1936 1958 0.98

6 7 0.06 15 8.1 3.1 2 23 2269 2290 2268 2290 0.97

7 7 6.7e-08 1.7e-05 26.8 1.3 1 23 2296 2318 2296 2318 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	8.3e-06	0.0021	20.3	0.9	1	23	1492	1514	1492	1514	0.98
2	7	1.6e-05	0.0042	19.3	2.1	1	23	1520	1542	1520	1542	0.98
3	7	0.028	7.1	9.2	1.5	2	23	1877	1898	1876	1898	0.98
4	7	1.2e-07	3e-05	26.1	0.5	1	23	1904	1926	1904	1926	0.98
5	7	0.00036	0.093	15.1	2.3	1	23	1936	1958	1936	1958	0.98
6	7	0.06	15	8.1	3.1	2	23	2269	2290	2268	2290	0.97
7	7	6.7e-08	1.7e-05	26.8	1.3	1	23	2296	2318	2296	2318	0.99

Sequence Information

Coding Sequence: ATGGCCTCAAACGAAGAATTGTCGGAAGCCATAAGGCAGTTAACAGGAGCAGTAAACGCTCAAATCGAACagattaaattaataaataaccGGTTATTACAACTGGAAAGTAGGACCATTCCACCCCAAGTGAATCCTCAAACCCTACAAGCCCCAAGGTCAGAGCAAGACTTAGCCGATATCAGGAAGCTACCTGATGGAGTTAGGGATCTCCAAGTATTTGACGGGAATGAAGCACAGTATATTTCATGGGTTCACAATGTAGAGTCAATACTTAATGACTATGAAATCGTGAAAGGCAAACCCATCTATAGGGCCATTTTGCAACATATTCGGCAAAAGGTAAGAGGTCCTGCAGACGCAGCCCTCATTTCCTACAACATTTTTGATAGTGACTGGGCAgccataaaaaaatgtttatctcTGCACTACGCAGACAAACGGGATGCTCGAACATTGGAGCACGAACTAAATAGAATGAGCCAGGGAAATAGAACTATAGACGAATTTTACGCTAGGGTTAACCATCAACTGTCCTtgctaataaataaaattaaaaccgaAGATTACTCACAGGAAACAGTTTTCGCTCTTACAGAAAGTCATAGGAACAGAGCTTTGGACATTTTCATAAGGGGTCTCAATGGAGACATTTCTAAAATGCTGGTAATCCAGAAACCACAAACACTTCCAGAAGCCTACACTTCTTGCTTAGAATTCCAAAATCTAAATTTCAGAAATTTTTCGATACATAAAAAGAATGTTAGTAATGCTGTTACGTCCCCTATTAATCAAATGTTTCCTTCCAAATATCAACCAAAACAAACAATTCCTCAATTAGCACCGAATGAGGGAATACAGTTGTATAATAGTCAACGTTATCTCAACCCAAGACCCACTCCCACTTGGAACAGCCCAGTACCTCCAAGACCGACTAACCCTAAACCACCACAACCGATGGAAATCGATAAATCGGTACAAACCCGACAAATTAATTACATGAATCGACCGGCAAATAATAACTATGAAAAGAGATTCAATAGTTCCGAAAACCTTCCCAGGAAACAACAACGCCTCTTTGCAACTGATATCATCACAGAACAGGAAAACGAGTTAGAAGAAGAACttaatgaaaactatttccgcGCCTACTTGGAAGAAGATTGCGAAGAAGGAAACGGAGAAGACTGCACTGAGTCTGCCACCGGTCAGTTAGAAATAACTAGGAAAGTTAGTGGTTCATTTTTTAAATCCGTAAGTAACAATGCCCTTATTGACTTCTTTGTTCTCCCAGGATTGACATCCTTTGATGGTATCATAGGCGATGATACTCTCAAAAAGCTAGAAGCCATTATAGACAGGAAAAATAATATTCTTACCATATCCCCAAACATTAAAATCaatctaaaagaaaaagaatcaaaacaGGTAAACAGCATTCAGACTAATCCTGATTACGAGAATATTGAAAACCTGTTGAATAAGTATGATAAACTATTCGGACCAATTTCAGACAGTGGTATCATAGATACAAGTGTCCGTGCAGAAATTAAAACTACATCTTCAGAACCTATATATACAAAATCCTACCCATACCCCGCCAACTTAAGATTGGAAGTCGAGTCCCAAATTAATAAAATGCTAGTCGATGGTGTCATAAGGCCATCTAAAAGCCCTTACAATTCGCCACTTTGGATAGTCCCCAAAAAAGCGAATGCAGCTGGTGAAAGACAATATAGATTAGTTATCGACTTCAAACGGCTTAACGCAATAACAATCCCAGATGCTTACCCCATCCCTGATATTACAAACACATTGGCAAGCTTAGGAGAATGCAAATTCTTCACAACGCTTGATCTGACGTCTGGATTTCATCAAATAAAGATGAAAGATAACGATATTCCAAAAACAGCATTTTCTACAGCAAATGGCAAATACGAATTTACTCGTCTGCCGTTCGGGCTTAAAAACGCGCCGGCCATTTTTCAAAGAATGATCAATGACGTTTTAAAGCCCTTGATTGGAAAAACATGCTATGTCTACATAGACGACattataatttttggaaaagacAAAGCAGATCATTTGAAGAACTTAGACGAAGTACTATCATATCTAGAGAAAGCTAACTTAAAAGTAAAcctagaaaaatcaaaatttcttaaaacacaggtaaattttttGGGATACATAATTACCCAAGAAGGTATACTGGCTGATCCCGAGAAAATCTCAGCGATTCAAAGAATTCCACCACCCCAAAATCTCAaagaattaaaaagttttttaggGCTAGCATCATATTACCGGAAATTCATCAAAGATTTCGCAAAAATTGCAAAACCTTTGACAAGCTTGACGCGAGGTCAGAATGCTCAAATCAAAGCAAACCAATCAAAGAAAATAGAAGTTCATCTTGATCAGCAAGCACTAAAAGCTTTCAAGGATCTGAAAGAAATGCTCATGTCTTCAGACATTCTGATATTCCCAAATTTCGAAAAACCATTCATTTTGACAACCGATGCTTCCAACTATGCCATCGGAGCCGTCCTGTCTCAAGGTGAAATAGGCAGGGATAAACCTGTCACGTTCATATCAAGATCACTCAACAAGACTGAAGAGGGGTTTTCaactattgaaaaagaaatgttagcaATAGTATGGTCTCTCGATAAGCTTAGGACATATCTTTACGGggctaaaaacataaaaattttcacGGATCATCAACCGTTAACGTTTGCCTTGAGCAACCGAAACAACAACGCAAAGTTGAAAAGATGGAAGGCTAGAATGGAAGAGTTTAACTACACTCTTATTTACAAGCCAGGAAGGTCAAATGTTGTTGCAGACGCCCTTTCGCGACTTCCAGTGCTTAATGTCCTAACATCATCTTCAGGAACACAACACAGTGCCGAAGAAGATAGCAGTGATCTTATCCCACACTGTGAGGTACCTCTGAATGTCTTCAGGAATCAACTAATTTTTTCCGAAGATCTAACCAGTGACCAAGAAGATATTGGCTCGTGTTCCCCTAGTTGCAAGTCAAATAGTCCTGACATTCAAATGCAATCGCAACACTCTCCAACAGCTGATGCTGAAGAAATCGATGCAACCACAACAACTTCTGGTGCTAGTGTTGCCTTTAGTTTAACCGATACACGAACAATGTTAGATAATCACCATCACATGCATCACCTCAATCATTTTAGTCATTTAAGTAATCATAGTGTAAATCATTTAGAAGACCACAATCACAACAAAGGCCTAATGTCACCGCTCCAAGACAATGAAGCCCATATGCCTCATCAGCAATCAGAGGTTATGGGTGGCTTGAAAGGCGAACAGCATACATATCTGCAAGAGATTGAGAGAATAAATAGTAAGTTACCTTCACCAACACCACCAGATCTGGAGATCAATAACCAACCCTTGGACAGGAGATCACCAGAGGTGGTCATAGGGGGAGAAACTTTGAAGGAACAGCAGCGAGACAGTGAGAAGACTGAAGCCGAAGAGTCGATCCATGCCAGAAGGGATAGTGAAAAGAGTGCTTCAATGTCAATAGTAGAACCTGAACAGAATGTCCTTACACCAACTGATGGTGATAAACCCAACGAAGAAGACTGTGCAGAGGAAGACAATCGTCAGATCTCGTCACCGATTGCGAATAGTCCGCCTCTGCAAATGCCACAATTCCCAGCACCTGGTCCAGTAACCCTTGAAGCGATACAAAACATGCAGATGGCTATCGCACAGTTTGCTGCGAAGACAATAGCTAATGGAAATGCTGGGGCAGATAACGAGGCTGCCATGAAGCAATTAGCATTTCTGCAGCAGACTCTATTCAATCTCCAACAGCAGCAGCTTTTCCAGATCCAGCTCATTCAGCAGCTTCAGTCACAGTTGGCTATGAATCAAGGAGGAAAGAGTGAAAATGAAGGTGAGGAAGAAAATGATGAGAATGAGCAAGAGCAGGAACAAGACCAGGAGCAGGAAGAGGAACTGGATATTGAAAGAGAAAGGGATCAAGAACACGATCAGGATCTAGAACCAGGTGAGCTTCGGGTGAAGCGTGAGAGAGTGGATGACGATATCCGCTGCCAAGACGAAGAAATGCAGGAATCAAACCACCATAGTGAGTCGAACAACAATGACTCAATCAAGCGAAAGCGTGAAGAATTCGCAGAGTTCAATAGGAACAACTCCCTTCAGATGCTAGCAAATATGAAACAAGACGAAAATATGCCCCTGCCGTTCGGCTCTGATTTAGCGTCCAGCATAATCACCAATCATGATGCCCTTCCATCGCTGGACGAGCCTAATTCTTTGGAAATGCTGCAACGAAGAGCTCAAGAAGTTCTTGATTCCGCTTCGCAAGGAATCTTGGCAAACAACCTTGCTGATGAATATGCCTTTGGTAAGGATGGCAAGACAGCTGATGGCAAGAGTCGTAACGAACCGTTCTTTAAACACCGCTGTAGATACTGCGGGAAGGTTTTCGGTTCGGACTCAGCTTTACAAATTCACATCCGCTCCCACACCGGGGAGCGACCATTCAAGTGCAATGTTTGTGGAAGTCGCTTTACCACAAAAGGTAACCTCAAAGTTCACTTCCAACGACACGCTCATAAGTtcccccatattcctatgaatGCGACACCCATTCCCGAGCATCTTGACAAATTTCACCCACCATTGCTGGAGCAGATGTCGCCGGATAGTTCACCGACTCATCAACCGCAAATGCCACAACAAATGCCTCCTGTTTCATTGCCTCTACCATTCCCACCGAGTGCTGGTTATCCTGGACTTCCTGGTCTGTATCGTCCACCGCTGGATATCCTCAAGTCTCTTGGACCTTATCCAAATCCGTTTTTCCCATCTCTGCCTCATTTGCCGCCAGCCATGGCAGCAGCCTTGAAACGCGATCAAGAGTTGCCTACTGACCTCCGCAAACCGTCGGCTCCAAACTCGCCAGAGCAGGTGAAGGATTCAGAGCCGGATGAGGAAAGAATTCACACAAGAAGTGTTACCCCAACAGCCGAAGAGCCATTGAGCTTAAAAATCAAACTGGAAGCAGTGCAAGAAGAGAATGAACATTCTCCAGACAGCGATCGAATGACTTCGCCACCACCAGCTCCAACTTCCATACCAATCCCACCCCCACCTATAACACAACCAATACCAACTCCGATTATCTCAGTGCGACCGTTGGCACCACCAACACCACCTACACCAACGAAATCATCTTTGCCCCCCGTTGTTCAACCTCAACAGCCAGCGATACATCCCCAAGCATCGCCAGGACACATACCTCCACAGAACGTAGAACTTCTACCCACTCCTGGTCAACTACCTCCATCATTTCACCGCGATGACTTCTTTGCAGATCGGTTTCCACTAAACTTCACAAAGACTTCGCCCGACCGCCGATCACCGATTCGCAGTCCAGCGAGCATCCCCAGGTCACCGTTCTTTGGAGCTGCTATGAAACATGAAATGGCCTTACTCCCTCGACCCCATAGCAATGACAATTCGTGGGAAAATTTCATTGAGGTGTCCAATACATCGGAAACACTAAAGCTCAAGGAAATGATGAAGAACAAGAAGCTGACCGATCCCAATCAATGTGTGGTGTGTGACCGGGTTTTGTCATGTAAGAGTGCATTGCAGATGCATTACAGAACGCATACTGGCGAACGACCTTTCAAATGTCGAATATGTGGTAGGGCTTTTACAACGAAAGGCAATCTGAAGACCCACATGGCCGTTCACAAGATTCGTCCACCAATGAGAAACTTCCACCAGTGCCCTGTGTGTCACAAGAAATACTCAAATGCTTTGGTGTTGCAGCAACATATTCGCCTTCACACCGGAGAGCCCACCGATCTGACGCCCGAACAGATTCAAGCCGCAGAGATACGAGACCCTCCACCTTCAATGATGCCAGGTGCGTTTTTAAACCCATTCGCCTTTCATTTTGGTGCGATGGGACCTGGTGGACCACATAATGGCACCATGGGCTCCGAGTCGTCTCAAGGTGACATGGACGACAACATGGATTGCAGCGATGACTTTGACGACGACGTTTCCTCTGAACATATGTCTTCGATTCATGATGATTCTGTGGATCGTCCAAAGTCCGGTGATGACATGAAGGGCATGTTATTcgaacaaaagttaaaaattgaGACAAACACAACCTCCGCGCCAACAAGTCCGCTGGAAAACACACCAGCCATCAACAAACCACCGGCTTCACCTGGCGACAGTTCTGTGCAACAAGGTGCTTTAGATCTCACTCCGCGATCTCAACAAAGCCAACACCAAACAGCCCCACCACCAACTAAAATACCCACACCCCCAACACCACCGCAGTCGAATCCAACACCACCCTCACAGCAAGTACCGCATCCACAACCGCAACAACACAGCCCAGTTGCCCCAAGTCATCCCAACATGTTTCTCCACCATCAGCAGCATCTGCACCAGCAATTACATCATCAtcaccaacagcaacaacatcaacagcatcTTCACCATCAACGACAGCAACAAGAAGCTCAGCATCAAGCCcaacaccaacagcagcagcatcatGCACTTCAACCACCGCCACCTCCGCAACCAAATCCAGCAATGGTCGCCGCTCGTCCGCCATTCGGCATGTTTCCCAACATCCCACTATTCCCGCCGGCAACGACACAAAACATGTGCACAGCCATGAACTCGATCGCTCAATCGGTGATGCCAGCGGCACCTTTCAATCCACTAGCACTCTCGGGCGTCAGAGGGAGCACAACTTGCGGTATTTGCTTCAAAACATTCCCATGCCATTCGGCTTTAGAAATCCACTATAGGAGTCATACCAAAGAGCGACCCTTTAAGTGCTCGATTTGTGATCGAGGTTTCACAACAAAGgGTAATCTAAAGCAACACATGTTAACGCATAAAATTCGGGATATGGAACAAGAGACCTTCAGAAACCGAGCTGTCAAGTATATGAGCGGCTGGAAAGAAGAATACGAGTAA
Protein Sequence: MASNEELSEAIRQLTGAVNAQIEQIKLINNRLLQLESRTIPPQVNPQTLQAPRSEQDLADIRKLPDGVRDLQVFDGNEAQYISWVHNVESILNDYEIVKGKPIYRAILQHIRQKVRGPADAALISYNIFDSDWAAIKKCLSLHYADKRDARTLEHELNRMSQGNRTIDEFYARVNHQLSLLINKIKTEDYSQETVFALTESHRNRALDIFIRGLNGDISKMLVIQKPQTLPEAYTSCLEFQNLNFRNFSIHKKNVSNAVTSPINQMFPSKYQPKQTIPQLAPNEGIQLYNSQRYLNPRPTPTWNSPVPPRPTNPKPPQPMEIDKSVQTRQINYMNRPANNNYEKRFNSSENLPRKQQRLFATDIITEQENELEEELNENYFRAYLEEDCEEGNGEDCTESATGQLEITRKVSGSFFKSVSNNALIDFFVLPGLTSFDGIIGDDTLKKLEAIIDRKNNILTISPNIKINLKEKESKQVNSIQTNPDYENIENLLNKYDKLFGPISDSGIIDTSVRAEIKTTSSEPIYTKSYPYPANLRLEVESQINKMLVDGVIRPSKSPYNSPLWIVPKKANAAGERQYRLVIDFKRLNAITIPDAYPIPDITNTLASLGECKFFTTLDLTSGFHQIKMKDNDIPKTAFSTANGKYEFTRLPFGLKNAPAIFQRMINDVLKPLIGKTCYVYIDDIIIFGKDKADHLKNLDEVLSYLEKANLKVNLEKSKFLKTQVNFLGYIITQEGILADPEKISAIQRIPPPQNLKELKSFLGLASYYRKFIKDFAKIAKPLTSLTRGQNAQIKANQSKKIEVHLDQQALKAFKDLKEMLMSSDILIFPNFEKPFILTTDASNYAIGAVLSQGEIGRDKPVTFISRSLNKTEEGFSTIEKEMLAIVWSLDKLRTYLYGAKNIKIFTDHQPLTFALSNRNNNAKLKRWKARMEEFNYTLIYKPGRSNVVADALSRLPVLNVLTSSSGTQHSAEEDSSDLIPHCEVPLNVFRNQLIFSEDLTSDQEDIGSCSPSCKSNSPDIQMQSQHSPTADAEEIDATTTTSGASVAFSLTDTRTMLDNHHHMHHLNHFSHLSNHSVNHLEDHNHNKGLMSPLQDNEAHMPHQQSEVMGGLKGEQHTYLQEIERINSKLPSPTPPDLEINNQPLDRRSPEVVIGGETLKEQQRDSEKTEAEESIHARRDSEKSASMSIVEPEQNVLTPTDGDKPNEEDCAEEDNRQISSPIANSPPLQMPQFPAPGPVTLEAIQNMQMAIAQFAAKTIANGNAGADNEAAMKQLAFLQQTLFNLQQQQLFQIQLIQQLQSQLAMNQGGKSENEGEEENDENEQEQEQDQEQEEELDIERERDQEHDQDLEPGELRVKRERVDDDIRCQDEEMQESNHHSESNNNDSIKRKREEFAEFNRNNSLQMLANMKQDENMPLPFGSDLASSIITNHDALPSLDEPNSLEMLQRRAQEVLDSASQGILANNLADEYAFGKDGKTADGKSRNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHAHKFPHIPMNATPIPEHLDKFHPPLLEQMSPDSSPTHQPQMPQQMPPVSLPLPFPPSAGYPGLPGLYRPPLDILKSLGPYPNPFFPSLPHLPPAMAAALKRDQELPTDLRKPSAPNSPEQVKDSEPDEERIHTRSVTPTAEEPLSLKIKLEAVQEENEHSPDSDRMTSPPPAPTSIPIPPPPITQPIPTPIISVRPLAPPTPPTPTKSSLPPVVQPQQPAIHPQASPGHIPPQNVELLPTPGQLPPSFHRDDFFADRFPLNFTKTSPDRRSPIRSPASIPRSPFFGAAMKHEMALLPRPHSNDNSWENFIEVSNTSETLKLKEMMKNKKLTDPNQCVVCDRVLSCKSALQMHYRTHTGERPFKCRICGRAFTTKGNLKTHMAVHKIRPPMRNFHQCPVCHKKYSNALVLQQHIRLHTGEPTDLTPEQIQAAEIRDPPPSMMPGAFLNPFAFHFGAMGPGGPHNGTMGSESSQGDMDDNMDCSDDFDDDVSSEHMSSIHDDSVDRPKSGDDMKGMLFEQKLKIETNTTSAPTSPLENTPAINKPPASPGDSSVQQGALDLTPRSQQSQHQTAPPPTKIPTPPTPPQSNPTPPSQQVPHPQPQQHSPVAPSHPNMFLHHQQHLHQQLHHHHQQQQHQQHLHHQRQQQEAQHQAQHQQQQHHALQPPPPPQPNPAMVAARPPFGMFPNIPLFPPATTQNMCTAMNSIAQSVMPAAPFNPLALSGVRGSTTCGICFKTFPCHSALEIHYRSHTKERPFKCSICDRGFTTKGNLKQHMLTHKIRDMEQETFRNRAVKYMSGWKEEYE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -