Basic Information

Insect: Melanostoma scalare
Gene Symbol: grau
Assembly: GCA_949752695.1
Location: OX456984.1:25158830-25161049[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.082 21 7.7 1.0 2 23 271 293 270 293 0.95

2 9 1.5e-05 0.0039 19.4 1.0 1 23 325 347 325 347 0.99

3 9 0.0068 1.8 11.1 6.4 1 23 355 377 355 377 0.98

4 9 6.7e-06 0.0017 20.5 1.7 1 23 385 408 385 408 0.96

5 9 0.0018 0.48 12.9 0.2 3 23 416 436 415 436 0.96

6 9 4.5e-05 0.012 17.9 0.4 2 23 445 467 444 467 0.95

7 9 6.3e-05 0.016 17.5 0.1 1 23 474 497 474 497 0.94

8 9 5.3e-07 0.00014 24.0 1.0 1 23 503 525 503 525 0.98

9 9 1.8e-06 0.00046 22.3 4.9 1 23 531 554 531 554 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.082	21	7.7	1.0	2	23	271	293	270	293	0.95
2	9	1.5e-05	0.0039	19.4	1.0	1	23	325	347	325	347	0.99
3	9	0.0068	1.8	11.1	6.4	1	23	355	377	355	377	0.98
4	9	6.7e-06	0.0017	20.5	1.7	1	23	385	408	385	408	0.96
5	9	0.0018	0.48	12.9	0.2	3	23	416	436	415	436	0.96
6	9	4.5e-05	0.012	17.9	0.4	2	23	445	467	444	467	0.95
7	9	6.3e-05	0.016	17.5	0.1	1	23	474	497	474	497	0.94
8	9	5.3e-07	0.00014	24.0	1.0	1	23	503	525	503	525	0.98
9	9	1.8e-06	0.00046	22.3	4.9	1	23	531	554	531	554	0.98

Sequence Information

Coding Sequence: ATGCTTTGTATTCTATGTGTTAATTTCCCCGACCAAATAATCGATATATTTGGTGAAGAAGGATTTTCTCTGAATGTATGTAGTATAATTGGGAAGCATTTCTGGATCCAGCCAAGTAAAGATGATGAAAATTCAAGATATATCTGTGGATCCTGTTGGAATGCATTGTATTCATTTCACAAATTCTACAAGGTAGTTGAAGACGCGCATATATCTTTGTTGAAAGCGAACACATCTGTCGAGGAGGATTTAAAACCTGGAGATGGACATGTACaggttgaagttgaagttgagttGATAGACAAATATGATCCAAATGCGGATTATTCCAGTGCAGCCGTCAAGGTAGAAGTGAAAGAAGATGGCGAGATTGTCTTTCCGCAGTTGGAAAATGATGCAGATGTGGAGCGAAATATTGATCTAAATAAAACTCCACAGCAACAGCGTTCATCGAACTCTAGTGATTCTGATGACTCTGAAATTCCGCTTTCTAACTTCGCCAAGACTAGGTCTAgcaagaaaattaaaacaacagaGTCTAGCAGTGATGAGGACGGATCTATAACTGAATGGCAAGGTCATCACTCAGACgttgaagatgatgatgacgaagATGAAGACGAAAGTGACTACGAAACCAAGAAAACAACACCCaaacgaaaaaaacaaacaaaagctgTCAAAAAACGAGGTCGACCCTCAAAAGGCTCCATCAAAAATACAACTCCCAAACAAGTTACTGAGGAACAAATCAAGAAACGACAACTCTCCCATGAATACGACAGTATCATTCAAAAGCATATGAAGTTGATATGCAATATTTGCCAGATTTCTCTCTCCAACTTCTTTATCTTAAAGAAGCACTACCGCTCTAAACACAACGAACGAGGCTATGCTTCGTGCTGTGGGAAGAAATTTCTGAAACGCGGCATTCTTGTCGATCATATCTACACTCATTTGAATCCGGAACACTTCAAATGCGATAAGTGCGACAAGGTTTTGGCTGACAGACGATGCCTTGAGGTACACATGAATATACACATAACGGAGAAGCAGCGCATCTATCAATGTGACCAATGTTGCAAGAGTTTCTTTAAGAAGCCATTGCTTACGCGTCACATGCATATTCATATACCCGCAGAGGAACGGAAGTTCCACTGCGAGGAATGCAATAAGTTTTTCCCATCAAATTACACTCTACGGGCACACATCAACAATGTCCATCAGAATGCATATGCAAAGATATGCGATCAATGTGGCAAATCAATCCGCGGGCGGGAAGCATTTCAAAGACACTTGCTGGAGCACGCCGGTGTACCAATACCCACTGTACAATGCGACAAATGTGgtgcaaaattgaaaaacaagtaCGGCCTCAAGAGACACATGAATGCGATGCATGTAGAGCCGAGCGTACCACATGTGTGTAATATTTGTGGCAAGGTAGCACCCAATCCGGCTGCATTGCAGAGGCACTACTCATATGTACATAAGTGCGAACGCAATCACAAGTGTCCCATGTGCGATAAGGCCTTCAAGAAGGCTGGAGGTTTGAAGGAGCACATGACAACACACACCGGAGAAGTTCTCTATACCTGCCCACATTGTCCGAAAACATTCAATTCGAACGCCAATTTGCATTCGCATCGTAAAAAAATGCATCGCAAGGAATGGGAGGAGAATCGGAGGCATCCACACATGGGAGCTTCTACAAACGCCACCGAGGAGAATGCCCAGCaatag
Protein Sequence: MLCILCVNFPDQIIDIFGEEGFSLNVCSIIGKHFWIQPSKDDENSRYICGSCWNALYSFHKFYKVVEDAHISLLKANTSVEEDLKPGDGHVQVEVEVELIDKYDPNADYSSAAVKVEVKEDGEIVFPQLENDADVERNIDLNKTPQQQRSSNSSDSDDSEIPLSNFAKTRSSKKIKTTESSSDEDGSITEWQGHHSDVEDDDDEDEDESDYETKKTTPKRKKQTKAVKKRGRPSKGSIKNTTPKQVTEEQIKKRQLSHEYDSIIQKHMKLICNICQISLSNFFILKKHYRSKHNERGYASCCGKKFLKRGILVDHIYTHLNPEHFKCDKCDKVLADRRCLEVHMNIHITEKQRIYQCDQCCKSFFKKPLLTRHMHIHIPAEERKFHCEECNKFFPSNYTLRAHINNVHQNAYAKICDQCGKSIRGREAFQRHLLEHAGVPIPTVQCDKCGAKLKNKYGLKRHMNAMHVEPSVPHVCNICGKVAPNPAALQRHYSYVHKCERNHKCPMCDKAFKKAGGLKEHMTTHTGEVLYTCPHCPKTFNSNANLHSHRKKMHRKEWEENRRHPHMGASTNATEENAQQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -