Basic Information

Insect: Melanostoma scalare
Gene Symbol: ZNF518A
Assembly: GCA_949752695.1
Location: OX456985.1:59314463-59330669[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00032 0.083 15.2 0.5 1 23 114 137 114 137 0.94

2 13 0.00015 0.038 16.3 2.7 3 23 144 164 143 165 0.94

3 13 2.8e-05 0.0074 18.6 6.5 1 23 174 197 174 197 0.96

4 13 6.8e-07 0.00018 23.7 2.5 1 23 332 354 332 354 0.98

5 13 8.6e-07 0.00022 23.3 5.4 1 23 360 382 360 382 0.98

6 13 1.1e-05 0.0027 19.9 0.6 1 23 388 411 388 411 0.97

7 13 1.4e-06 0.00036 22.7 1.2 3 23 425 445 424 445 0.97

8 13 0.01 2.7 10.5 2.4 2 23 451 472 450 472 0.96

9 13 2.8e-06 0.00072 21.7 0.7 1 23 478 500 478 500 0.96

10 13 2.3e-06 0.0006 22.0 0.7 1 23 506 528 506 528 0.98

11 13 5.1e-07 0.00013 24.1 0.9 3 23 536 556 534 556 0.96

12 13 5.1e-06 0.0013 20.9 4.2 1 23 562 584 562 584 0.99

13 13 8e-05 0.021 17.2 0.4 1 23 589 612 589 612 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00032	0.083	15.2	0.5	1	23	114	137	114	137	0.94
2	13	0.00015	0.038	16.3	2.7	3	23	144	164	143	165	0.94
3	13	2.8e-05	0.0074	18.6	6.5	1	23	174	197	174	197	0.96
4	13	6.8e-07	0.00018	23.7	2.5	1	23	332	354	332	354	0.98
5	13	8.6e-07	0.00022	23.3	5.4	1	23	360	382	360	382	0.98
6	13	1.1e-05	0.0027	19.9	0.6	1	23	388	411	388	411	0.97
7	13	1.4e-06	0.00036	22.7	1.2	3	23	425	445	424	445	0.97
8	13	0.01	2.7	10.5	2.4	2	23	451	472	450	472	0.96
9	13	2.8e-06	0.00072	21.7	0.7	1	23	478	500	478	500	0.96
10	13	2.3e-06	0.0006	22.0	0.7	1	23	506	528	506	528	0.98
11	13	5.1e-07	0.00013	24.1	0.9	3	23	536	556	534	556	0.96
12	13	5.1e-06	0.0013	20.9	4.2	1	23	562	584	562	584	0.99
13	13	8e-05	0.021	17.2	0.4	1	23	589	612	589	612	0.96

Sequence Information

Coding Sequence: ATGCGTGACTTTGACATTGATAAAATGTGCAGAGTATGTCTGCAAACTAATCTCGATCTTTTTCTACTTTTTGACGAGCAAAACGGCGTTGATGGAGTCTTTCTATCAAATATGATTACAGAACTAACAATTTATACAGTTCGTCGGCATGATGACTTCCCGCATCAAATATGCTTGGAGTGTATGAACAAAGTTCGAAATGCatataacataaaaaaacaatttgaaaaatccCATCGCCAACTACTTACTTATTTGGAATCAATTAATAAAGTTGTGAGAAACATTGAGCCAAATCATTCAAATGATAAGTATGTTCAAACAGAAGACACCACAATGTTTCCTTGTGAAAAATGTGACGAAAAGTTTATCAGCTATAATAGCTTGagagaacaCCGACTGGAGTCACACAAAGGAACGGACAATTTTTGTCGATTCTGTAGTAAAACGTTCAAGCGCCTCGGAGACCTCAAGAACCACATAGCCGTTCATCATACTGAAATTGGTCACATTAGCCCACATCAATGTCATATTTGCGAAAGGAAATTTACCAGGAAAGAGCATGTCCAGAGACATATGTTACAAATTCACAAAATAGATAGTGTCCATCTATCGGAACACTGTTCCTCCACAgagaaaatAGAATCTGATCTTCACGAACCGGAAATTCTAGTTGAAAATGTGGTTGAATACGGAAGTCTGTCAAAACAAGAAGACGAATCCGACCATCTTTCAAATACACATGAAGAAATAAAAGATGGTTATGCCAGTGCTGATAATTCCTTCAGTAGCGATGACGATGATAAGCCATTGTCGGGATTGCGAGACGCATCAAGTGTAAAAAACAAAGATGCGGAAAATTTGGTGATCAAGACGGAACCTGACGAGAATTCATGTTTGAAAGAGTTCGATACCTCGCAGCTAGAAGAATTAAAACCTATCAAATGTGAACTCATGGTACCTGACTCTTTGCAAGAAACacagagaaaaaaatttcaatgtgcTGATTGCGATAAGTTATTTGTTCGTAGCACTCATCTAAAACGACATATGCTGTCGCATACTGAAATCAAACCATTCCAATGTACCAGCTGTGATAAGCGGTTTAAGAGATCCGATCATCTCAAAAACCACATGACCATGCATGACACAGATAAAAAATTTAGCTGTGATATCTGCGATCGTAGTTATGGTCGAGCAGATCTCCTCAAGCGTCACAAGGAAACAAAACACAATGCCAATGGTCATTTAGAACAATTAAGATCTGAACTGTGTTTGTTATGTAATAAGTCGTTTAGTTCACAGGCATATTTGCAAAAGCATATGCGCCTGCATACAAACAAATCTTGGAAATGTAAGTTCTGTCCTTGTGGATTTGAATCCAGACAGGCATTGAAGGAACACAGTAAATCGCATGACAAAGAAAAACCATTTTTGTGCTCAGAATGTGGTATGCGTTTCGGAAGAAAAGATTATCTCTTGGTTCACATGCGGCGGCACAACGGTGAGAAGCCCTACAGGTGTAAATATTGCGATAAAGGATTCCCGAGGGCAACCGATTTGAATGTTCATGAGAAATATCACACCGGAGAAAAAACACATCTGTGTACAATTTGTGGGAAAGGGTTTCAGCGATCGTACAATTTGGTTGTACACATGCGAGTTCATACTGGAGAGAGGCCGTATCAGTGCTCCCATTGTCCAAAGAATTTCGCTCAATGCAATGATTTGAAAGCTCACGTACGCAGACATACTGGAGAGCGGTTTAAATGTGAGATTTGTGGAATCGGATTTGTACAAGGCTACCACCTTACACAGCATAAAGTAACAGCTCACGGAATCGAAGGAAAAGCTATTTCGGGAAGAGTCTCTAAAGTGCTACTCATAACTGGAACTTCAGAGaaTGCGTGCGAGTTCGTTACCGATGAGACTATACTTGAAAATGGGACAAGCAGTTAG
Protein Sequence: MRDFDIDKMCRVCLQTNLDLFLLFDEQNGVDGVFLSNMITELTIYTVRRHDDFPHQICLECMNKVRNAYNIKKQFEKSHRQLLTYLESINKVVRNIEPNHSNDKYVQTEDTTMFPCEKCDEKFISYNSLREHRLESHKGTDNFCRFCSKTFKRLGDLKNHIAVHHTEIGHISPHQCHICERKFTRKEHVQRHMLQIHKIDSVHLSEHCSSTEKIESDLHEPEILVENVVEYGSLSKQEDESDHLSNTHEEIKDGYASADNSFSSDDDDKPLSGLRDASSVKNKDAENLVIKTEPDENSCLKEFDTSQLEELKPIKCELMVPDSLQETQRKKFQCADCDKLFVRSTHLKRHMLSHTEIKPFQCTSCDKRFKRSDHLKNHMTMHDTDKKFSCDICDRSYGRADLLKRHKETKHNANGHLEQLRSELCLLCNKSFSSQAYLQKHMRLHTNKSWKCKFCPCGFESRQALKEHSKSHDKEKPFLCSECGMRFGRKDYLLVHMRRHNGEKPYRCKYCDKGFPRATDLNVHEKYHTGEKTHLCTICGKGFQRSYNLVVHMRVHTGERPYQCSHCPKNFAQCNDLKAHVRRHTGERFKCEICGIGFVQGYHLTQHKVTAHGIEGKAISGRVSKVLLITGTSENACEFVTDETILENGTSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00976735;
90% Identity: iTF_00976735;
80% Identity: -