Msca059220.1
Basic Information
- Insect
- Melanostoma scalare
- Gene Symbol
- SNAPC4
- Assembly
- GCA_949752695.1
- Location
- OX456986.1:158094383-158104368[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.92 3.6e+03 0.1 0.0 22 46 214 240 202 240 0.83 2 5 1.8e-10 7.1e-07 31.1 0.2 1 44 246 290 246 292 0.94 3 5 3e-12 1.2e-08 36.8 0.1 2 43 302 347 301 348 0.94 4 5 9.9e-11 3.8e-07 32.0 0.0 2 44 357 400 356 402 0.90 5 5 6.3e-16 2.4e-12 48.6 0.0 2 44 409 452 408 453 0.96
Sequence Information
- Coding Sequence
- ATGAGCTGTACGGAggatgatgacgacgacgacgaagatTTGACCGATAATGAAGATGCAATAAGTTCCAGTAGTGAAGAGGAATCTCTTTTAGATGAATTAAATATCGATTTTATGACCGATGCTGTCAAGCTTTTGGAAGATCATGCTGATGTTAGCATGGAAAATTCTATTACCCTCAATCGCGGTTTGCAGGATAAATTGGAAACATTTCGCATAAAGATCATCTCCATGATCAACAAGTGTAGGGAAATATACcaagaaaatcaaataaaactcagCAATCCATCGCTGACGgttaattatttgaaaggtatAGGATCTTGTGGCAGTCCGTTTTTTAAAGACATGACTGGGCGACATTGTCCATCAAATAAGGATTATTTACACCGCCGTGAAGTTGAGAAGGAATTGTTTCCTAGTGATTTGGAGCTATACCCGCATTTTACATGGACCGCCACAGACAAAGTGGGTGTTCTTCAAGGAGTCAAAGAACAGGCAATCGATTACATAGAACGGAAGGAGTCGTAcgcaaataaattacaaaaacccAAACCAACAGCCCTgagtaaaaaagtaaaactaCACACACTGAAACTGACAAAAATCCTCGATAAAATCGACGAAGACTTTTCCATTGACTGGAACCAAGTATCCGTTTACAATCTTGGTTCTCGTCATACAGAAAATAGTTGCTATGCAATTTGGAATGTTTATCTAAAGCCGGAACTCAACCGTAACGATTGGACGGAACAAGAAAACATCAAATTGAATGAACTGGCAAAGAAGTACAAGTTTCAAGACTGGATTGCTATAGCTAGTGAGATGAAGAACAGATCTGATTATCAGTGCTTCGTTCAATACCAGACTGTGGTGTCGGTAAAAATGCGCGAAGACAAAGGCGAACGCTGGACAAAGGAAGAAGATTTGTTACTGTTGTCTTTGGTGGAGAAAAATCGAATGGGCAATGTGATACGCTGGAACCCGATTTGTTCGCAATTGCCCAATCGCTCCAAGAGACAGTGCTTTGCCCGGTACAAGTACAGTATTAATCCCAACATTAGCAGAGCTCCATTTACCCCCGAAGAGGACTGCATTATTTTAGCTGCTGTTGAAGAGTTTGGCGAAAATTTCAATTGCTTTCCCAAGGAGCTATTTCCGAATCGAACAGTTGTCCAAATACGCAACAGATACAATAATTCCATAAAAAACCGCGAAACAATGAAACCGTGGACACCCGAAGACGATCAATTGCTTATCGATCTGGTGGCCAAATATGGCGAGCGCGATTGGACAACAATTTCTAAAGAAATACCAAATCACCCTCGAACAAGTTGTCGCGGTCGCTTCATGActatttccaagtttttaaaAGACAATCCGGATGCCACTGTTGAAGATATCCCGAGGAAAAGACGCCAAGTCCAATCAAATGTTACCAAAAGCAATTGGGTCGAAACAATAACGAATTTAAAAGAAGATCGGGCAAAACCAGTAAAACCAGTACAACCAAGAGATACTAGCAAAGAATTGTATCGTTACAGACTACGCAACAACGAACTGCAATGGTACAACTTTCTCAAGTGCTCCTACGACTACAAGTTTGGGGAAGGTTATACCAAGGTACCAAATAACTTGGCAAGTTTAGAATTTGCTCGATGTGTTTTTGACATTGATCTACAATTGCCAGTTGTACTCAGCGATCGTTATTCCAAAGGAATGGTTCAGGTGACCTTGGAGAAACTGGTTCGACAACATGACCAAGATGACAAAACGTTAGTCTTTCAAAAACCCGCAGTTGGATACAAATTGCCACCGAGCTATAGCACTCTGTTAGGATTCCGGGGACTATGCATTCAAGCCATATTCAAACAAGATGAAGACCAATCGATAATTGCGATAGACGATTGGCCGGAAGATGTGTGTGAGGCGAGACAAAAGTTTCGCCAACGGCTTGGTGCTCTACTTTACAAGACAACTCTTCTCAGCCGTCTAACGCCCGAGTCTTCGGTTGAACAGAGTAATTTCAGAGTGATTTTCGACGCAAATACCGTGGTCGGATATAAAGCGGGAATTGATTTGGCTGAACTGAGGCTTGCTCAAGTCAACAGAATCGCCGACAACCTTCTCATTGCTAGAGAAAAAGCCGACCAGAAGAGACTGTACGAGGAGAAGTTAGAAAAGAGGGCGAGAAttactaaaaaagaaaagaaaattttgaatcaGGACactgagaaaaaaattgtgCCCGCCACCCCCTTAGCAACGCCTACAACCTTGACTATGACCAAGAATCTGATCATTGCAACTCGGAAGGCTACGAAAGATCGAGAAagccaaaaaaatataaaggcTGCCAATGGCGTATCACTAAAAAAAGAAGGTCAAACAGAGAAAGTTGTTGAAGTTCAACTTaaggaaaacagaaaaagaaaattttcggAGAAGGATTCGGAGACGGAAACAGATGTGAAACCGAAGGTATCACAACCTTCGACAAAACAAGCAAAAcaagaaattgaataa
- Protein Sequence
- MSCTEDDDDDDEDLTDNEDAISSSSEEESLLDELNIDFMTDAVKLLEDHADVSMENSITLNRGLQDKLETFRIKIISMINKCREIYQENQIKLSNPSLTVNYLKGIGSCGSPFFKDMTGRHCPSNKDYLHRREVEKELFPSDLELYPHFTWTATDKVGVLQGVKEQAIDYIERKESYANKLQKPKPTALSKKVKLHTLKLTKILDKIDEDFSIDWNQVSVYNLGSRHTENSCYAIWNVYLKPELNRNDWTEQENIKLNELAKKYKFQDWIAIASEMKNRSDYQCFVQYQTVVSVKMREDKGERWTKEEDLLLLSLVEKNRMGNVIRWNPICSQLPNRSKRQCFARYKYSINPNISRAPFTPEEDCIILAAVEEFGENFNCFPKELFPNRTVVQIRNRYNNSIKNRETMKPWTPEDDQLLIDLVAKYGERDWTTISKEIPNHPRTSCRGRFMTISKFLKDNPDATVEDIPRKRRQVQSNVTKSNWVETITNLKEDRAKPVKPVQPRDTSKELYRYRLRNNELQWYNFLKCSYDYKFGEGYTKVPNNLASLEFARCVFDIDLQLPVVLSDRYSKGMVQVTLEKLVRQHDQDDKTLVFQKPAVGYKLPPSYSTLLGFRGLCIQAIFKQDEDQSIIAIDDWPEDVCEARQKFRQRLGALLYKTTLLSRLTPESSVEQSNFRVIFDANTVVGYKAGIDLAELRLAQVNRIADNLLIAREKADQKRLYEEKLEKRARITKKEKKILNQDTEKKIVPATPLATPTTLTMTKNLIIATRKATKDRESQKNIKAANGVSLKKEGQTEKVVEVQLKENRKRKFSEKDSETETDVKPKVSQPSTKQAKQEIE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -