Msca018217.1
Basic Information
- Insect
- Melanostoma scalare
- Gene Symbol
- XBP1
- Assembly
- GCA_949752695.1
- Location
- OX456984.1:237920255-237921635[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5 8.2e+03 -1.2 0.1 15 25 47 57 46 59 0.86 2 2 3.7e-14 1.2e-10 43.1 21.9 2 64 62 138 62 145 0.90
Sequence Information
- Coding Sequence
- atGACTACGCCAGTTTTTATGACCGTACCCAAGTACGTTGCAATTTCTCCGAGTCCTCTTACCAGGATGAGTTCTGCATCTTCATCAATCGGAATGATATCGAACTACGGAGGCTCGGAATCATCTTCGGATGATTCATCTGCACAACGAGGAAAGAAGCGTCGCCTGGATCATCTATCATGGGAAGAGAAGCTACAAAGAAAaaaacTGAAGAACAGAGTAGCAGCACAGACATCACGTGATCGCAAAAAAGCTCGAATGGAAGAAATGGAACAACATGTAAATGAACTTACAGAAAAGACAGAAATACTTCAAAACAAATGTGACAGCCTTCAGGCTATTAATGAGTCCCTTTtggctaaaaatgaaaaactagaCAAAGAAGTTGAATGTTTGAAAGAACAACTGGCGCAACTACAAAGtgtacaacaacaacagcaacaacagtcGGTGAATTGGAATGAAAGAATCACTATCAATGACACAACAAACCGACCAACAACAACGCAAACACAAACGCCCCCAGTCACCCTTCGGCGAGAGCTCAGTTGCAGCACTCTGGAAGATTGTAGCGCTCTGCCTTCTCTACAAGACATGCTCGAAGATTTCGACGCCACTAAACTGGAAGAGCTTGCCGAAAGCTTACTCGCAGATATCACTGCAGACATGGAAGGAAGCAATCCAAAAAGCAACACAGATGCTACCCAAAATGCAGGCATCGCAGAGCGATTGTCTGGACCAGTGGTGGGGACCACACAACAAGTCTTGGAATCCAGCCAACATACAAGCAACAGCTGCGACAGTAGTATCTGCTTAGAAACAGAGTCACAATCACTTACCAACACAACAGAACCAGCAGATACAGGGGAAACTATATACGGGACCTATGACGAAAAGACAAACTCAATTACAATAGTCGTTGGCGATGATGATGTCGCTATGAATGAAGCAGTTGAGGAGGTATATTGCGAAGGAGAGGAACCACCCCAAAATGAGGGTGTCATTGAGTGTGGTATGACCTCAGATGATATTGGAGATGATGACGAAGACTTCGATCCAATGGAAAGGTTCTTATCGCTTCCCATCGACACAAAGAGAAATAGCTTGAAGAGTCCTTTCTCGATACATTCGTACTCGGATCCGGGATATGAATCGATCGGCTCACCTCAAAGTGACATAGGATCGACGATATCAACGTTCGATGAGATGGCTTGGAATAACAGCATTAACGACCTGTTTCCATCGTTACTTTTAAATCCGTAA
- Protein Sequence
- MTTPVFMTVPKYVAISPSPLTRMSSASSSIGMISNYGGSESSSDDSSAQRGKKRRLDHLSWEEKLQRKKLKNRVAAQTSRDRKKARMEEMEQHVNELTEKTEILQNKCDSLQAINESLLAKNEKLDKEVECLKEQLAQLQSVQQQQQQQSVNWNERITINDTTNRPTTTQTQTPPVTLRRELSCSTLEDCSALPSLQDMLEDFDATKLEELAESLLADITADMEGSNPKSNTDATQNAGIAERLSGPVVGTTQQVLESSQHTSNSCDSSICLETESQSLTNTTEPADTGETIYGTYDEKTNSITIVVGDDDVAMNEAVEEVYCEGEEPPQNEGVIECGMTSDDIGDDDEDFDPMERFLSLPIDTKRNSLKSPFSIHSYSDPGYESIGSPQSDIGSTISTFDEMAWNNSINDLFPSLLLNP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -