Basic Information

Insect: Melanophora roralis
Gene Symbol: -
Assembly: GCA_963583895.1
Location: OY757190.1:2460016-2464273[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 5.2e-06 0.00057 21.2 2.9 2 23 416 438 415 438 0.97

2 8 2.8e-06 0.0003 22.1 3.1 1 23 447 470 447 470 0.96

3 8 0.00042 0.045 15.2 2.3 1 23 476 498 476 498 0.97

4 8 3.2e-05 0.0035 18.7 0.3 1 23 504 526 504 526 0.97

5 8 0.0023 0.25 12.9 0.3 3 23 534 554 533 554 0.99

6 8 2.8e-05 0.003 18.9 1.3 2 23 560 582 559 582 0.94

7 8 0.011 1.2 10.7 2.2 1 23 588 610 588 610 0.98

8 8 0.014 1.5 10.4 0.1 3 22 618 637 617 640 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	5.2e-06	0.00057	21.2	2.9	2	23	416	438	415	438	0.97
2	8	2.8e-06	0.0003	22.1	3.1	1	23	447	470	447	470	0.96
3	8	0.00042	0.045	15.2	2.3	1	23	476	498	476	498	0.97
4	8	3.2e-05	0.0035	18.7	0.3	1	23	504	526	504	526	0.97
5	8	0.0023	0.25	12.9	0.3	3	23	534	554	533	554	0.99
6	8	2.8e-05	0.003	18.9	1.3	2	23	560	582	559	582	0.94
7	8	0.011	1.2	10.7	2.2	1	23	588	610	588	610	0.98
8	8	0.014	1.5	10.4	0.1	3	22	618	637	617	640	0.90

Sequence Information

Coding Sequence: ATGTTGCCAGTTACCCGTGCGAATTTGGATCACATATGTTGCATTTGTCTGATTGACATAAGGCCTCCAATATTTACGGAAAAAGTTTAcgatgttaaaaaagaaaagaatatgtCAAAGGTACTTAAACTTACAGCTCATATTACGATATTAAGGAATCCCATTAATCATAAATATATGAATGACTACTGTCGCAAAATATGTGAAATATGCTATCTAAAAACCCAGTATTCCTATATTTTTcgggaaaaaattattgcatcCACTGCAGTGCTAAAGGAACTTCTAGAAAGTGATGAACTTAGTGTAGACGACATGGCAAGGTTAAAGCATTTTTGTCGCATTTGTTTTAATCGACAAAATAATCCTAAAGCAAACGAAAGGAATGTAAGCATGCAACAATTGAATTGGCTAAAGGACTGCAGTGGCATACGTTACACTTCGTTAATTGATACGCAAGCATTTCGTATAAAGGAGGGTACTAATATAAATGAAATAGCAGTGATAAATGATAAAGACTTTCCTAAACTATTGTGTCGAAACTGTTCAAAGAAACTACACAACGTTGAAGAGTTTCGTAAGTCGGCAACACAATCATTTGAATATATGATTTCGATCATGGGTGATTCAAGCTACCCAGATGAGGAGTTAGTGACACAAAAAATAGCACAATGTAAAGAAAACTTAGTATGGAAAATGATACCACCATCAACACAGCCCGTGTCGGATAATGAAGCTATTGACGCTATTGAACAAATAAGTGTGGATTTTAAACAAGAGAAACTGCAAGATAATACTTCAGATGTTTTTGAAAGTCATATGCAGGAAGCTTATGCTGGGTTAGACAAGTCAAATGTCAATCAGTGTTCtccttcaaatgttttaaagttgGAAAAAgatgattttgaaaataatatagaTTTTATTCACGACTTGCCACACTATTCGGATGTAGATGATGATTTTAAAGATGaagaatttacattaaataataatattgatgAGTCTTCTTCTGACGATTTTAGTGAAACAGTCAATAACTGTTCGAGAGAAACTCGAGCAAGAAAATCGAAACAGAgcgaggaaaaaattaaaattttgtctacCGAAGAAAAATCACCAAGTGAGACCTGCTTCCATAATCATAAAAAACGaactaacaacaataaaaaaccaaaaaaaagcaaaacatcgAAGAACgacaaactaaaaaataatgataataatactATTAAAGAGACAATAACTTGTGAGGAATGTTcgcaaaaatttgcaaattgtaGTAATCTTAAAAGGCACCAAAAAACAGTGCACAGCTCAGAATCAAGTCAAACGCTGCACATTTGCCCAATATGCTCAAAAGAATTTAAACGTAAAAGTCATTTTGAGGATCATATAAAAATGGTACACGAAAAGCAAAGACCATTTAAATGTTCGCTTTGTCCAAAGCATTTTGCTACAAAGAGTTCTAAGCGAGTTCATGAACTTATTCACACAGGTAAGTTTCCGTTTGTATGCGAATGGTGCCAAAAAGGTTTTCGCCAAGCCTCCCGACTTAAAACGCATGTAGAAATGCATACAACCGAACCCGATCTTTTATGTCCGATCTGTAAAAGAAGCCAAAAGACGGCGAAGGACCTAGAGGCTCATCTAAAAAGTCACGATGATAAACGTTTGCAGTGCCCTTcgtgtggaaaactttttacaaaaaaatcccaTCTTACTGATCATTATAACGCCGTTCATTTAAAATTACGCCCGTTCAAGTGCGAGTTTTGCGAGGAATCTTTTGGTGATCGAAAAACTAGACGACAACACGAAAAAAGTCATACAGAAAATCGACCCGAAATCTGTGCTGTTTGTAAACGTGGATTCAGAGCAGTAAGCGCCCTAAACAAGCATATCAAGCAGTCTGGTCATTTTACTGAGGAAATAAGAAACCAAGATAgaaaagccaaaaagaaaatagaaatcaTGAGTGATATGTTTGAACTAGCTTCACAGAATCTATTGTGTTAA
Protein Sequence: MLPVTRANLDHICCICLIDIRPPIFTEKVYDVKKEKNMSKVLKLTAHITILRNPINHKYMNDYCRKICEICYLKTQYSYIFREKIIASTAVLKELLESDELSVDDMARLKHFCRICFNRQNNPKANERNVSMQQLNWLKDCSGIRYTSLIDTQAFRIKEGTNINEIAVINDKDFPKLLCRNCSKKLHNVEEFRKSATQSFEYMISIMGDSSYPDEELVTQKIAQCKENLVWKMIPPSTQPVSDNEAIDAIEQISVDFKQEKLQDNTSDVFESHMQEAYAGLDKSNVNQCSPSNVLKLEKDDFENNIDFIHDLPHYSDVDDDFKDEEFTLNNNIDESSSDDFSETVNNCSRETRARKSKQSEEKIKILSTEEKSPSETCFHNHKKRTNNNKKPKKSKTSKNDKLKNNDNNTIKETITCEECSQKFANCSNLKRHQKTVHSSESSQTLHICPICSKEFKRKSHFEDHIKMVHEKQRPFKCSLCPKHFATKSSKRVHELIHTGKFPFVCEWCQKGFRQASRLKTHVEMHTTEPDLLCPICKRSQKTAKDLEAHLKSHDDKRLQCPSCGKLFTKKSHLTDHYNAVHLKLRPFKCEFCEESFGDRKTRRQHEKSHTENRPEICAVCKRGFRAVSALNKHIKQSGHFTEEIRNQDRKAKKKIEIMSDMFELASQNLLC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -