Basic Information

Insect: Melanophora roralis
Gene Symbol: PRDM15
Assembly: GCA_963583895.1
Location: OY757191.1:24507390-24514375[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.00034 0.037 15.5 3.1 2 20 508 526 508 528 0.94

2 9 0.015 1.6 10.4 2.6 1 23 537 560 537 560 0.93

3 9 2.1e-05 0.0022 19.3 3.2 1 23 565 587 565 587 0.97

4 9 4.9e-05 0.0053 18.1 0.6 1 23 598 620 598 620 0.95

5 9 0.00025 0.027 15.9 3.3 1 23 625 647 625 647 0.99

6 9 1e-05 0.0011 20.3 1.8 3 23 655 675 653 675 0.97

7 9 0.15 16 7.2 0.4 2 23 681 702 680 702 0.94

8 9 0.26 28 6.4 0.4 1 23 741 764 741 764 0.88

9 9 0.008 0.87 11.2 2.5 3 23 772 793 770 794 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.00034	0.037	15.5	3.1	2	20	508	526	508	528	0.94
2	9	0.015	1.6	10.4	2.6	1	23	537	560	537	560	0.93
3	9	2.1e-05	0.0022	19.3	3.2	1	23	565	587	565	587	0.97
4	9	4.9e-05	0.0053	18.1	0.6	1	23	598	620	598	620	0.95
5	9	0.00025	0.027	15.9	3.3	1	23	625	647	625	647	0.99
6	9	1e-05	0.0011	20.3	1.8	3	23	655	675	653	675	0.97
7	9	0.15	16	7.2	0.4	2	23	681	702	680	702	0.94
8	9	0.26	28	6.4	0.4	1	23	741	764	741	764	0.88
9	9	0.008	0.87	11.2	2.5	3	23	772	793	770	794	0.95

Sequence Information

Coding Sequence: ATGAGAAGATGTATCTTATGTAAAAAGAAGGATGGTCCAGGAAGTTGCACTTTTTTTCAAGTACCCAAAGATGAAAGGAGGCGTGTAAAATGGGGTAATATTTGCAAAATGAATCTTCCAGAAAGTGTTCATATTTGCATTGACCATTTTCCATCGTCACAAGTCGTAATAGCTGGccggaaaaagtttttaatgcccAATGCTGAACCTGTTTTACCATTGCCAACGCTTACAGATGAGGATAATGATGATCAACTATCCCATTCGTTGTCTCCAATGGATGAAAACTTAGTGAACGTTATGAGTGAACCATTCTTCCCTGAacTTAATGCTAATGATGATGCCAAAAGTAGTCAAGAAGATGTGCTTCAAGAAAATCTTGTTaacataaatgaaaatgttCAGCTAGAGAACTCTTTATTACAAATGTCATTTGTAAAGGCAGATACTAGATCAAAATCTACACAAACCCATTTACGCCTTTGTGCTACAGTGGAAGTTTCAGAGTTCGACGAAAACTTTCGCTTAAATTGTTTCTATTGTTGTGAATCATTCCCTTTGGAAAAGTGGAAAAGATTCATATCTCATGTTAAAAATGAGCATTTTGATTATGAAAAAGCATTTGAAATGTgcaaatatgttttggaggatCACGACTATACGCCTGTTAATGCAGCTGATACTACTTCAGCTATGAAATCTTCAAAACGTGAAACGCTTCGTACGGATTCTAAGTCAATGCCTCACCATTTAGTGGATCCGCTGGAAATGTCTAATAATCGTGTAAAAGAGTCTTTAAATGGTAATTCAAGTAACATAGAACAAAAGAACTTTGAGATTACTGATAACGCAGACAGTTTAGGGAAACCTGTAATCACTTCGTTTAAAGTGGAGcctatttttgaaaacatattaaTTGATACCACAAATATCGCTGAGCCCGACACTGCTGCGACTCACTTAGCAAGTAATCCAAAAAACGAAAGGAGAATAACCACTAGAAATATTACagataaaaaatgttcaaaaatgaTAAACCGAAACACAAAGAAGAGCAAGCAAAAGCAAACATCAAATAATACCATTTTGAGTCGCTGTTTGAAAAGATCGAATACCACTAAAGCCCTGGTTGTAGAGGAAATAAAAGACGAATGTATGGGTTCTGAAGTTCAAAAATATCTTGAGCAAGAGGCCGCTGAGCTTTCTTTCGAGTTTACACCGCGTGACATAATAGATTTTTTGCTGgataatatgaaaaattatccGGTGATATGGCAATTTGATGAAACGCCCTTTAATGAAGGCTTTTATGAAGCAATCGAAGAGTTATGTGGCTTAGTTAACGAAAAATGGTCCTTGAATATTGATACTTTGAAAATGCGACGTAGCGTTAATCGTATACTAAGATTTTACTGTTCTCTGTATCCTTGTGAAAATctagaaaatattaatgaatttaCTTGCTTTTACGACAAATGTGCTCTTTTTTTGCCCACATCTGTGCATGATATCGCTTATGCGCGTTGTTCCCATTGCTACaagtgctacaaaaacaattccGAACTAAAAGCTCATTTGCTAGAAGAGCAAAAATACTTGAAATGGCCGTACAAGTGCGTAGAGTGCAAGGAATGTTTTAGAGATAACGATGAATACGAGTTTCATAAACGTCTACCACACTATCAGGAAGTCTTCAGATGTCAAATATGCAACAAAGAGTTTACTCGTCGCAATAAATACAACAAGCATATGTTAGATCACAAAGTGAAACAGAGTGATGAGCCTGGCAAACACGTATGCAATATATGTGGTAAAGTGTTCAAGATAAAAGGACAATTGCGAGGTCATTTAATCTTTCACGGCgaaagaaaattcaaatgtcagctgtgtcaaaaaaaattttttacgcgCCCGACACTTGAAGATCACACTCGGCGGCACAATAAACAGTTCCTATCAATATGTGAGATATGTGGCAAGGAATGTAGTGACCAAAACAAATTGAAGCGGCACATGATCAAACACACAGGAGATAAAATTACTTGTAATATTTGCAACTTAAAGCTAAGAAAATCAAGTCTACCGCGGCACCTGCGCCTTGTTCATGTAGCATGTGAAGGCACCATAGATACCACGTATAGAGCAAGAACTCATCATTATAAGAGTTTATTTTTGGAGCCTactagaaaaaaatcaaataaaagcgTTGATTGCAAAAGTTACAGTTGTAAAATCTGTAATATTCCGTTTGAAGGTATTAAACCTCTATATAAACACAACAAAGAGTTCCATTCCGATGCACCAAAGTGGGCGTGTAAAATATGCGGTTcgaaaatcaaaatcaaatcaaacctTAAACAACATTATCGCAAAAAGCACCATTTTCATAGGTATCAGGTCTTTAAATTGGTTGAAAAAAACGAAGATATTGATACCGTCTTAGCAATGAGTAAGGAGGAGTTGAACAAGTTAAGCGAAACTTTAGGATATTCGCAACCAAAAGACAATGTTAATACTACTATAATGAAATCAGATTCAGACTTAGAAGATGAGGCATATGTTAAAGAGGAATACCTTATTGAGTCATTGGATGATAATGTTATAAGTGATACTGATAATATCATTACGATcgaaaatgaaattaaagtcGATGACGGTCAATATATGACTGAGTTTTTTACATGTCTCTAA
Protein Sequence: MRRCILCKKKDGPGSCTFFQVPKDERRRVKWGNICKMNLPESVHICIDHFPSSQVVIAGRKKFLMPNAEPVLPLPTLTDEDNDDQLSHSLSPMDENLVNVMSEPFFPELNANDDAKSSQEDVLQENLVNINENVQLENSLLQMSFVKADTRSKSTQTHLRLCATVEVSEFDENFRLNCFYCCESFPLEKWKRFISHVKNEHFDYEKAFEMCKYVLEDHDYTPVNAADTTSAMKSSKRETLRTDSKSMPHHLVDPLEMSNNRVKESLNGNSSNIEQKNFEITDNADSLGKPVITSFKVEPIFENILIDTTNIAEPDTAATHLASNPKNERRITTRNITDKKCSKMINRNTKKSKQKQTSNNTILSRCLKRSNTTKALVVEEIKDECMGSEVQKYLEQEAAELSFEFTPRDIIDFLLDNMKNYPVIWQFDETPFNEGFYEAIEELCGLVNEKWSLNIDTLKMRRSVNRILRFYCSLYPCENLENINEFTCFYDKCALFLPTSVHDIAYARCSHCYKCYKNNSELKAHLLEEQKYLKWPYKCVECKECFRDNDEYEFHKRLPHYQEVFRCQICNKEFTRRNKYNKHMLDHKVKQSDEPGKHVCNICGKVFKIKGQLRGHLIFHGERKFKCQLCQKKFFTRPTLEDHTRRHNKQFLSICEICGKECSDQNKLKRHMIKHTGDKITCNICNLKLRKSSLPRHLRLVHVACEGTIDTTYRARTHHYKSLFLEPTRKKSNKSVDCKSYSCKICNIPFEGIKPLYKHNKEFHSDAPKWACKICGSKIKIKSNLKQHYRKKHHFHRYQVFKLVEKNEDIDTVLAMSKEELNKLSETLGYSQPKDNVNTTIMKSDSDLEDEAYVKEEYLIESLDDNVISDTDNIITIENEIKVDDGQYMTEFFTCL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00975924;
90% Identity: -
80% Identity: -