Basic Information

Insect: Melanophora roralis
Gene Symbol: Znf574
Assembly: GCA_963583895.1
Location: OY757190.1:38325548-38327259[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.004 0.44 12.1 0.8 2 23 256 278 255 278 0.90

2 9 1.8e-06 0.0002 22.6 2.2 1 23 311 334 311 334 0.96

3 9 1.3e-05 0.0014 19.9 1.1 1 23 343 365 343 365 0.98

4 9 0.0096 1 10.9 0.8 1 23 371 394 371 394 0.96

5 9 0.014 1.5 10.4 0.3 3 23 400 420 399 420 0.96

6 9 0.038 4.1 9.1 1.2 2 23 429 450 428 450 0.95

7 9 0.00016 0.018 16.5 0.2 1 23 456 479 456 479 0.96

8 9 2.3e-06 0.00025 22.3 1.5 1 23 485 507 485 507 0.99

9 9 0.00052 0.056 14.9 6.1 1 23 513 536 513 536 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.004	0.44	12.1	0.8	2	23	256	278	255	278	0.90
2	9	1.8e-06	0.0002	22.6	2.2	1	23	311	334	311	334	0.96
3	9	1.3e-05	0.0014	19.9	1.1	1	23	343	365	343	365	0.98
4	9	0.0096	1	10.9	0.8	1	23	371	394	371	394	0.96
5	9	0.014	1.5	10.4	0.3	3	23	400	420	399	420	0.96
6	9	0.038	4.1	9.1	1.2	2	23	429	450	428	450	0.95
7	9	0.00016	0.018	16.5	0.2	1	23	456	479	456	479	0.96
8	9	2.3e-06	0.00025	22.3	1.5	1	23	485	507	485	507	0.99
9	9	0.00052	0.056	14.9	6.1	1	23	513	536	513	536	0.98

Sequence Information

Coding Sequence: atGTCTGCAACATCACTATGTCGTTTGTGTATTTGCAATCACACTGAGTTTAAAAGTCTAGAGGACAATCTTAATCAAGCAACCAAAGTCTATGAAAttactgtaaaatattttgatccTATGtttctcAACTTTGAACACTGTTCATTTACCCTTTCTAAGGGTATATGCATCGAATGTTGGCAACATATTTTTGACtttcataattttcaacaaTCAGTGTACGatgctcaaaaaaaatttgaaaataatttaaaggaaaacattacCAATATTAAATTGGAAGAGGAAACAACAATTGATAGAGAACCCGTTAATGGCAATCTAAGTACAAGCGTGGAAAATGTTGAAAGTGAAATCTGTTTCCCAGAGCTAGATtcaacagatttaaaaaatgaagaTTATTTTTTAGCGGAAACATGTAAATTCGGTGATGATAAAACTGTTTCCATAGAGTTATCTGATGATTTGGTAAAAGGggcaaagaaaattaaaaacagaaaaacaaagaTTAAAAAACTCGGGAAAAGCAAGCAAATAAAGTCGAAAAAGAAATATAGACTTAGAACTCTGAATCTcaacaaacaaattcaaaaagataGTGCAATAAAGGAAAACGAATTTTATGATGACAGCAAAAGTAATAACAGTGACAGTTATAAGTCTGATACAAATGATATTACTTCCTCCAATGAGCCGCAAAAGCCAACAAAGCAAAAACACGACGAAGTTGATGCATTTATTGCTGAATGGAAGCCAGAGTTAGAGTGTGATCTTTGTAAAGCAAATTTTACCAACTTGACtagtttacaaaaacattttagtttaaatcatcctCAACAAAAGTGTTATGTGTCATGCTGCCAACGAAAACTGCAACAACGTTTTCGTATAGTTGAACATATACGTTATCATATGGatgcaaatacttttaaatgtaaaatatgcgAAAAGTCTTTTCCATTTAGCCGTAATTTAAACTATCATATGCGTGATCAGCATACAGTTAAAGGTCAAGAGCGCTCTTTCGAATGTTCCATATGCCAAAAgcgattttacaaaaaaggagCACTAAAATCTCATCTCGGTACTCATGATACAGCTACAACCTATAAGTGCAGTCAATGTGAAAAAGGATTTCCTACAGAGCAACGACGAAAAATTCATGAACGCTCTGTACATAATGTGGATCGTATCTGTGAACAATGTGGCAAAACATTGCATGGCATTGCTGCTCTTAAGCAGCATATGCTTCAACATGCTGGAGTTGAGAAAAAGAAATGGCCTTGTGATCAATGTAATGCAGAACTAACATcacattttagtttaaaacgtCACAAAACAATTCACGACTCCTCCACGGTTTACGTGTGCAATGAATGCGGAAAAACTGCAGCTACACAGATGGGCTTGCAAAGTCATAAAAAGTACGCTCACCAGTTGGAGCGTAAATTTAAATGTACTATTTGCGATAAGGCCTTCAAAAAAGCACATGTTCTGCGTGAACATATGGCCACACACACGGGAGAAGATTTATATACATGTCCGCATTGCCCACAGAGATTTAAAGTTAATGCCAATATGCATCATCATCGAAAAAGGGTACATCCAATAGAATGGGCTGAGAGTAGAGCGAACAAATTTTCCAGGTCcaaattataa
Protein Sequence: MSATSLCRLCICNHTEFKSLEDNLNQATKVYEITVKYFDPMFLNFEHCSFTLSKGICIECWQHIFDFHNFQQSVYDAQKKFENNLKENITNIKLEEETTIDREPVNGNLSTSVENVESEICFPELDSTDLKNEDYFLAETCKFGDDKTVSIELSDDLVKGAKKIKNRKTKIKKLGKSKQIKSKKKYRLRTLNLNKQIQKDSAIKENEFYDDSKSNNSDSYKSDTNDITSSNEPQKPTKQKHDEVDAFIAEWKPELECDLCKANFTNLTSLQKHFSLNHPQQKCYVSCCQRKLQQRFRIVEHIRYHMDANTFKCKICEKSFPFSRNLNYHMRDQHTVKGQERSFECSICQKRFYKKGALKSHLGTHDTATTYKCSQCEKGFPTEQRRKIHERSVHNVDRICEQCGKTLHGIAALKQHMLQHAGVEKKKWPCDQCNAELTSHFSLKRHKTIHDSSTVYVCNECGKTAATQMGLQSHKKYAHQLERKFKCTICDKAFKKAHVLREHMATHTGEDLYTCPHCPQRFKVNANMHHHRKRVHPIEWAESRANKFSRSKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -