Basic Information

Insect: Melanophora roralis
Gene Symbol: wdn
Assembly: GCA_963583895.1
Location: OY757187.1:34910768-34914810[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.023 2.5 9.7 3.4 1 23 302 324 302 324 0.97

2 8 1.5e-06 0.00016 22.9 0.3 1 23 327 349 327 349 0.98

3 8 0.097 11 7.8 1.8 2 23 361 381 360 381 0.93

4 8 4.5e-06 0.00049 21.4 1.0 3 23 389 409 387 409 0.98

5 8 3.5e-05 0.0038 18.6 5.1 1 23 415 437 415 437 0.98

6 8 0.00035 0.038 15.5 3.0 1 23 443 465 443 465 0.97

7 8 8.5e-06 0.00093 20.5 0.8 1 23 471 493 471 493 0.96

8 8 0.00016 0.017 16.6 2.3 1 23 499 522 499 522 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.023	2.5	9.7	3.4	1	23	302	324	302	324	0.97
2	8	1.5e-06	0.00016	22.9	0.3	1	23	327	349	327	349	0.98
3	8	0.097	11	7.8	1.8	2	23	361	381	360	381	0.93
4	8	4.5e-06	0.00049	21.4	1.0	3	23	389	409	387	409	0.98
5	8	3.5e-05	0.0038	18.6	5.1	1	23	415	437	415	437	0.98
6	8	0.00035	0.038	15.5	3.0	1	23	443	465	443	465	0.97
7	8	8.5e-06	0.00093	20.5	0.8	1	23	471	493	471	493	0.96
8	8	0.00016	0.017	16.6	2.3	1	23	499	522	499	522	0.98

Sequence Information

Coding Sequence: atgaaaGAAGAAGCAGTGATGAGCAGTAAATTGCCGCCTAAAATAATGGGTGGTGTTGACGGTCCATCAACAATTGCAACGGCCATGGTTAAAAGTACCAGTTCGATAGCTATTCCTACTCTCAACTCCATTATGTTTAACCCCAGTCAAAACCACAGCACAACACCTAGTAGACAGCACAATGATGAAATACTAAGTACGTTATTACGTATGAATAATTTTGATTCTATATCCAGCATTAAGGATGAGTCGCTAGACATTGATCTGTCGGCATGTGTTACAATTAGCGGAGACCCATCGGGCATTATTGGAGGCAACAGTTTGTCATCATCTGACTTCTGGCGGGTGCTAGATGAAAGTGCGCAAATTTCGCAGTTGGATGTAAGTAACAGCAGTGCTAATAATATATTGGGTGGTAATTGCAGTATGAGTCGGGAATCTTTCCAAACCTCACCTACCGTCTTATGTAACGGTAACTCGACGGTGTCCAATGAGAAGAATGAGTTAAAGTTTCTTGTTAAGAATGAGCAGACGGACTTTAGTGGAACTTTCCTAAAGCCATCGACTGGAATTTCGTTTTCACCACTTAAACGTACTTCTAAGCCTACACAATCGGATCAGCAAATACGCAAAGAAAAATCTTCCTCAAATTTGACAAAATCCGAAGTAGGACCTCCTTCCTTAGCACCCATAATGCGTTTACATCAAACATTCATTAAACCTCAGGTAGAAGCGGCAAAGCTTAATAATAATGACAGTATATCCAAGAATCAAGCAGTCCAAACTCTGAAGCCGGAAAAGAACTTATTGCTTGCTTCCAATCAACCACCGCCTCTGGCTGCTTTAGAAACTGCTGGAAAAAAGGGAACGGAAGTCAAGCTCCCAGCCCTGCCCGATTCTATGTATAAATGCCttgattgtaaaaatatattccgCGGTAGTCAGGAGTTGAAAAAACACTCTAATCATCATATAATTTACAAATGCCCTGAATGCGATAAAGAATTTGATGTGGAATCATcgttaaaaaagcatttaaaagcaCATCGTCCAATAGATGCGCGTAAAGACGGATGGAAAAAGTGTCCCGATTGCGGAAAGTGccTTAAATTGGGAAGCATGTGGATGCATCGTAAAATTcatactgaaaataaaaaatatggttgtGAGATATGTGGGCAGAAGTTTGTGCAGAAGATAAACCTAACACATCACCAACGTATACATACTTCAGAAAAGCCATACGAATGTTCCGAGTGCCAAAAACGTTTTCAAGAGCGCAGTCACCTGCAGCGGCATCAAAAATATCATGCTCAAACTCGTTCGTATCGTTGCGAAAAATGTGGCAAAATGTACAAAACTGAAAGATGTCTCAAGGTCCACAATTTGGTGCACTTGGAACAAAGACCATTTGCTTGTACCGTCTGCGACAAGTCCTTCATATCCAATTCCAAACTTAAGCAACATTCGAACATACACACCGGCGAGAGACCATTCAAATGTAATTATTGTCCACGAGATTTTACAAACTTTCCTAATTGGTTGAAACACACTAGACGTCGTCATAAAGTTGACCATAAAACGGGGGAAATGTTGGAAAATATACCGTCGTACTGCTCAAAAAAATCTTCGCGTGTACCTAAGGAAAAGAAGGCAACAGAGGTAAAAACATCTGCAGctgcaacaaaaaacaacactACTACCATTAAGTGCAAAAACAGCATCCCTCCCATAGCGATAAATCAAAGGCCCATTGATCTCAAGAAAAATGATAAAAGTGAACAAGAACAGGTTCAGAAACAGCTACAGATATTAGCGACATTTTCAACTGCAATAACTACCACCAGTACAACATTGGCACGCAACACTATTCCCACTACAATGTTCACTACCATAACCCTTACAAAACCTATAGTTACGATTGCTTCCACTACAAGTAAAAGTAATCAACTAAGCACTCTTAATGGACCGCCTCCATTAGCTAAAGTGCCGGCAAAGCGTAGAAAAAAGCAAACTACAGTTCTGACGCAAACAAAAAAGTCAAATTGTTCACCTGCATCCTTGACAACTGCTACGAGCTCATCAACAGCTACGAATTTCATAATAACTAAATCTCCACATAATGCAAACTTGCCTATAGTTACTTCTAATTGTAACACAGGTCCACCACCACTAGCCCTAGTGTATAACACAAAACCCCTTACTGTGATTAGTACAACAGTGACGACAACAAATTCTACCAACACTTTAAAAGCACCTCACCCACCGGCACAGCAACAACAGTCAACTAATAAGCAAACAGCAAAAGTAGAAAAAGTCAAAAGGGAAAGAAAACAATCTATGCCAAAGCAAGTTCAACAAGTACCACCgcctttaattataaaaaaggagTTTTTAGAGCCAAAAACGGAAATAGATGCTGCAAGTCATGAGCAAAACAAACAGCAGgagcaaaatttaactcaacaacgtctccaacaacaacaacagctccAACAACGTCTCCAACAGCAACAGTCTCAACAGCGTTTACAACAACAGTCACAACAACgtttgcaacaacaacaaccaaaagTATCTTTTACTGATTTACACTGCTTAAGTATGACTTCTGCCGAGGAACTAATTATGGAACAGGCCCTCGAAATGGAAGAGTGCGGCTTGTACAAGGCGTCTTTGTCGAACGGCGTTACAGATCATGTTATTCCAAATTTTGCGGATACCGATAATGCCATTTCATCAGACTCAGTTGCTAATTTACACttcaaaattaaacaagaaCACCTTGATAtggatttgaaattaaaaactgaagaatTTGATTCAGTTAAACATTCAGTGTGCTCTTCACTCGAATCGTCGCCGTTCTCATCGCCTGCATCACTAGAATTTGCACCTTCATCGACTTTACCCACTACTGACtttacaacaaataatttttacttaccACAGTTTACGATTTCCAATGGTCAAATAATTTCAACAAATGCACCTATGACCGAGATAAGAACTGAAGACTTTAGAGGTACTATGACACATACCTACTTGCCACAATTAATTACGACAAATGTTAATGTTCctgatttaatacaaattaacaataacaATCAGAGATATTTGAAAGCCACCTCTACTACAAGCAGTAGCAGTAGGATGGTATCTGCAGGAAGTAATGAGATTGCAGCAAATTCTTTTATTAACCAACTATACATGCCATTAACCGTCAACGCCGGACCCATGCTTATGAAATCAAACCAAGCATTGCCCTCTGTTGATACACTGTtgttttcaaattcaaaattggGCGGACTTTTTACCAATCGAAATTTGCCGAAACAAGCCACAACAGCTCAACACAACTTATCCTAA
Protein Sequence: MKEEAVMSSKLPPKIMGGVDGPSTIATAMVKSTSSIAIPTLNSIMFNPSQNHSTTPSRQHNDEILSTLLRMNNFDSISSIKDESLDIDLSACVTISGDPSGIIGGNSLSSSDFWRVLDESAQISQLDVSNSSANNILGGNCSMSRESFQTSPTVLCNGNSTVSNEKNELKFLVKNEQTDFSGTFLKPSTGISFSPLKRTSKPTQSDQQIRKEKSSSNLTKSEVGPPSLAPIMRLHQTFIKPQVEAAKLNNNDSISKNQAVQTLKPEKNLLLASNQPPPLAALETAGKKGTEVKLPALPDSMYKCLDCKNIFRGSQELKKHSNHHIIYKCPECDKEFDVESSLKKHLKAHRPIDARKDGWKKCPDCGKCLKLGSMWMHRKIHTENKKYGCEICGQKFVQKINLTHHQRIHTSEKPYECSECQKRFQERSHLQRHQKYHAQTRSYRCEKCGKMYKTERCLKVHNLVHLEQRPFACTVCDKSFISNSKLKQHSNIHTGERPFKCNYCPRDFTNFPNWLKHTRRRHKVDHKTGEMLENIPSYCSKKSSRVPKEKKATEVKTSAAATKNNTTTIKCKNSIPPIAINQRPIDLKKNDKSEQEQVQKQLQILATFSTAITTTSTTLARNTIPTTMFTTITLTKPIVTIASTTSKSNQLSTLNGPPPLAKVPAKRRKKQTTVLTQTKKSNCSPASLTTATSSSTATNFIITKSPHNANLPIVTSNCNTGPPPLALVYNTKPLTVISTTVTTTNSTNTLKAPHPPAQQQQSTNKQTAKVEKVKRERKQSMPKQVQQVPPPLIIKKEFLEPKTEIDAASHEQNKQQEQNLTQQRLQQQQQLQQRLQQQQSQQRLQQQSQQRLQQQQPKVSFTDLHCLSMTSAEELIMEQALEMEECGLYKASLSNGVTDHVIPNFADTDNAISSDSVANLHFKIKQEHLDMDLKLKTEEFDSVKHSVCSSLESSPFSSPASLEFAPSSTLPTTDFTTNNFYLPQFTISNGQIISTNAPMTEIRTEDFRGTMTHTYLPQLITTNVNVPDLIQINNNNQRYLKATSTTSSSSRMVSAGSNEIAANSFINQLYMPLTVNAGPMLMKSNQALPSVDTLLFSNSKLGGLFTNRNLPKQATTAQHNLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -