Basic Information

Insect: Melanophora roralis
Gene Symbol: -
Assembly: GCA_963583895.1
Location: OY757191.1:68642965-68647230[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 1.8 1.9e+02 3.8 0.2 2 19 370 387 369 387 0.94

2 19 0.63 68 5.2 0.1 1 23 399 424 399 424 0.89

3 19 0.0077 0.84 11.2 3.1 3 19 437 453 436 455 0.94

4 19 2.2 2.4e+02 3.5 0.7 2 23 468 489 468 489 0.86

5 19 0.0032 0.35 12.4 0.6 3 23 498 519 497 519 0.94

6 19 0.26 28 6.4 0.2 3 23 527 547 525 547 0.94

7 19 9.1e-06 0.00099 20.4 1.6 1 23 554 577 554 577 0.96

8 19 1.1e-05 0.0012 20.2 1.9 2 23 585 606 584 606 0.97

9 19 0.0094 1 11.0 0.0 1 21 615 635 615 636 0.94

10 19 0.097 10 7.8 1.1 1 22 656 677 656 680 0.91

11 19 0.035 3.8 9.2 6.7 1 23 685 707 685 707 0.96

12 19 0.16 17 7.1 0.3 1 23 723 748 723 748 0.97

13 19 0.53 57 5.5 2.3 1 23 759 782 759 782 0.96

14 19 0.2 21 6.8 3.6 2 23 788 810 787 810 0.95

15 19 0.0028 0.3 12.6 1.9 2 23 814 836 813 836 0.93

16 19 0.92 99 4.7 4.0 1 23 842 865 842 865 0.93

17 19 0.00084 0.091 14.3 0.2 1 23 870 892 870 892 0.97

18 19 4.4e-06 0.00048 21.4 1.5 1 23 898 920 898 920 0.99

19 19 0.012 1.3 10.6 0.9 5 23 936 955 927 955 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	1.8	1.9e+02	3.8	0.2	2	19	370	387	369	387	0.94
2	19	0.63	68	5.2	0.1	1	23	399	424	399	424	0.89
3	19	0.0077	0.84	11.2	3.1	3	19	437	453	436	455	0.94
4	19	2.2	2.4e+02	3.5	0.7	2	23	468	489	468	489	0.86
5	19	0.0032	0.35	12.4	0.6	3	23	498	519	497	519	0.94
6	19	0.26	28	6.4	0.2	3	23	527	547	525	547	0.94
7	19	9.1e-06	0.00099	20.4	1.6	1	23	554	577	554	577	0.96
8	19	1.1e-05	0.0012	20.2	1.9	2	23	585	606	584	606	0.97
9	19	0.0094	1	11.0	0.0	1	21	615	635	615	636	0.94
10	19	0.097	10	7.8	1.1	1	22	656	677	656	680	0.91
11	19	0.035	3.8	9.2	6.7	1	23	685	707	685	707	0.96
12	19	0.16	17	7.1	0.3	1	23	723	748	723	748	0.97
13	19	0.53	57	5.5	2.3	1	23	759	782	759	782	0.96
14	19	0.2	21	6.8	3.6	2	23	788	810	787	810	0.95
15	19	0.0028	0.3	12.6	1.9	2	23	814	836	813	836	0.93
16	19	0.92	99	4.7	4.0	1	23	842	865	842	865	0.93
17	19	0.00084	0.091	14.3	0.2	1	23	870	892	870	892	0.97
18	19	4.4e-06	0.00048	21.4	1.5	1	23	898	920	898	920	0.99
19	19	0.012	1.3	10.6	0.9	5	23	936	955	927	955	0.89

Sequence Information

Coding Sequence: ATGGCGGTTAATGTTTCCACAACCACGAGTGTCTGTTTATATTGCAAAGTAACCTCGGATGCGGATGTTGAAAAGAATTTTCATGAGATTAGTGATGAAGTGGGTCTGGATTTACAGCTACCCGCcttagttaaacatttttttgatattaaagtggaaaaaaattcCAAGAGTCTGCTATGTGATGATTGCGTAAATCGTCTAATAGATCTTTATGACCAAGAGGAGCACACTAAAGAGAAAAATGCTAAAGCAGTTGaactaataaatgaaaatagatCACAAGTTGCTTTACCACACTGTTCAACAAGTCGTtaccaaaattcaaaaatagttACAAACGAATATGTAGAATATGAAATAGGAGTGaaagataaaaatgttaaagaaagtgaaaatgaaagttttgacgataaaattattaaaaatgttacttaTGCCAATAATTTGTTTGATGAAAATCCAGATGAAGATGGAAATccagataaacaaaaaaatgaaacggTCCAAACGCTTAACTATAAGAAAACTGACAGTATTAATGAAATTAAGGATGAATGTGAACTTTTGGAAAATGATGTTATTCAACTTGTTTTGGAAAGTGATGACAGCgtttttaatatagaaactCAGTCTAATGCAAGTAATATAAGTGGCACTGAAATCCCTATTGAAGAGTTTATAATTCTAAATGAAAGTGCAGAAAATGAAAATGAGATTAATATTATAGAGGAACATATTGTCGAAGAGATTTTAGACAAACAAGATTCTAAAAAAAGCCCTTTTCCAAACGATGACGAAGTACATTTGGAAGAACTTGACAATGCATATAATGAGAACGAGCTATTAAATATAATTGATATTGAAGATACAGTAGACACTGATGACAATTTAATAACATTGAAtagagaaaataataaaaaaataattgataaagAATATACAGATGAAAATGAGAAATCAATGGATGAATTATATACAATGGAAGAGGAGTATTTAATTGAAGAAATAATGTGCTCTCAGGAATATGATGAAATCGATATTAATGAATATTTAGCTAAAGTTTTAGTAACAAAATTCCAAGACTTGGAATTAGATTGGGAAGTGGAATGCAATTTAtgtcaagaaaaatattttagtctTCAAGAGTTGCTAAATCATCCTTGTGTCATAGAATTAGAGGAGAATCAACGGTTCACTTGTCTTTTTAAAGATTGCGAGGAAAATATTACCAGCTCTGCGGCCTTGGCGAGACATTTAGTTCTTCGACATTATTCTCAATTagatagTACCCTAATTTATGCCAACTGCCCTGATTGCCAGAAATCGTTTTCAAATTTCATGGATTTTAATAAGCATTCCTGCTGTCGTAATATCAGAAGAAAACCGGGATCACCAAACTACTGTGAATATTGTGATATGGATTTTCCGTCTCtaaaaagatttgtttttcaTATGCAATTTCATTTAACCAATCGTCGACCTAAGGCTTGTTTATTATGtggtgaattttttaaaacttctaatgACTTATTTGAACACACCCAATATAAGCATAATCCTGATACTGCAATGGCATGTATGATATGCGATCGTTTCTTTAAGGAAAGGGAAATTTTTGAAAGCCACATGGATCTACATGAGGATTCCAAATATCAATTTGCCTGTACTTATTGCCCAAAAAAGTATACCAATAAAACTGGTTTGAATTCGCATATGaattctttTCACAACAAGAAATCCAGTACTATTAAATGTTACTATTGTGAAAAGTCATTTGTTAATAATAGTTCATATCGTAACCATTTAAAATCGCATGCCGAGGATGTGCAAGTTGACTCATTTGTTTGTACAGGATGTGGTTTAATATCTAATAAATCTGAATACCTaaaggccCACATTGAATCTGAGGAGGGTTTAACTTGTCCCACAGCTAAAATTGAGCAGAAAATGCTTAGAATTGGCTATACATGTGAAAATTGTTCTATGGATTTTCTTACCCTTAAAGATCTTAAGAAACATCGTTTAAGTGATACTCATAACGATGAATTATTTCATTGTGGTATTTGTCGTCGAACATTTAAAACATTACGCCATATGCGTAACCATTCAAATAATCACAAGGATTTCGAAAAACTACAAGAAGCTTTTCCAATAACGAGATATTATGTCTGCAACATTGGAgaTTGCGAAGAGTTTTATACCATTTGGACTACATTGTATTATCACAAAAAACGTCCACATAAGATAAAGGAGAGTGTTAAGCCCAACGAATATAAATGTCAACTTTGTCAACATTTGTGTATTTCGAAAATGTCTTTAGCCGTTCATGTTGCTAGAAGTCATAAAATTTcaaACGTCGTCTGTCCACATTGTAAGAGACAACATAAGaatcaaaaacttttacaagAACATATTGATAAATTTCATACCCCAgtaaaatgtaatatttgtttaaaaaattttaaaaaccgacGCAACCTGGATTCGCATCATGGCATGGTTCATCTTGAAATAAAgcgttatttttgcaaattttgtaaaaaaggttatttttacaaaagtgaaaaaaatgctCACGAAACTAAGACCCATCCAGAATTTTCCTATGAATGTAACATCTGCAGTTTTTCAACAAATTATCCTGAATCATTAGAAATCCATATGGACAATCATAATAACCAGCTAAAATTCAAGTGCGAAATATGTAACAAAGCATTTGGGCGAAAACAGTTGTTAAAGCTCCATTTGAAGAGgcattcaaacaaaaaagaacaTATTTGTTGCGATTATTTAACTGAAAATGGGTGTGACGCATCTTTCTACACGTTTAATTTGCTGAAAACacatattaaaactaaacatggCGAAACCAAATtagaaaaagtaacaaacaaacaGAAATCAACTTCAAAAACGCATCTTGAATTTCAAGTTCTAAATACAGTTGAAGATTCGAATGACATATCGGATTGTAATGTGCCTGCAAAACGTTTTAGAAACGATCAAGATGATAGTTTATACGCAGAAAATGAATATTGCATCGACTTGGAATTGGAAAATGAAATGCAGTCAGATGAACAAATAAGTGATAGTGAACTTGTGTTAAAGGAAtag
Protein Sequence: MAVNVSTTTSVCLYCKVTSDADVEKNFHEISDEVGLDLQLPALVKHFFDIKVEKNSKSLLCDDCVNRLIDLYDQEEHTKEKNAKAVELINENRSQVALPHCSTSRYQNSKIVTNEYVEYEIGVKDKNVKESENESFDDKIIKNVTYANNLFDENPDEDGNPDKQKNETVQTLNYKKTDSINEIKDECELLENDVIQLVLESDDSVFNIETQSNASNISGTEIPIEEFIILNESAENENEINIIEEHIVEEILDKQDSKKSPFPNDDEVHLEELDNAYNENELLNIIDIEDTVDTDDNLITLNRENNKKIIDKEYTDENEKSMDELYTMEEEYLIEEIMCSQEYDEIDINEYLAKVLVTKFQDLELDWEVECNLCQEKYFSLQELLNHPCVIELEENQRFTCLFKDCEENITSSAALARHLVLRHYSQLDSTLIYANCPDCQKSFSNFMDFNKHSCCRNIRRKPGSPNYCEYCDMDFPSLKRFVFHMQFHLTNRRPKACLLCGEFFKTSNDLFEHTQYKHNPDTAMACMICDRFFKEREIFESHMDLHEDSKYQFACTYCPKKYTNKTGLNSHMNSFHNKKSSTIKCYYCEKSFVNNSSYRNHLKSHAEDVQVDSFVCTGCGLISNKSEYLKAHIESEEGLTCPTAKIEQKMLRIGYTCENCSMDFLTLKDLKKHRLSDTHNDELFHCGICRRTFKTLRHMRNHSNNHKDFEKLQEAFPITRYYVCNIGDCEEFYTIWTTLYYHKKRPHKIKESVKPNEYKCQLCQHLCISKMSLAVHVARSHKISNVVCPHCKRQHKNQKLLQEHIDKFHTPVKCNICLKNFKNRRNLDSHHGMVHLEIKRYFCKFCKKGYFYKSEKNAHETKTHPEFSYECNICSFSTNYPESLEIHMDNHNNQLKFKCEICNKAFGRKQLLKLHLKRHSNKKEHICCDYLTENGCDASFYTFNLLKTHIKTKHGETKLEKVTNKQKSTSKTHLEFQVLNTVEDSNDISDCNVPAKRFRNDQDDSLYAENEYCIDLELENEMQSDEQISDSELVLKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00975941;
90% Identity: iTF_00975941;
80% Identity: -