Mror025727.1
Basic Information
- Insect
- Melanophora roralis
- Gene Symbol
- Tf2-12
- Assembly
- GCA_963583895.1
- Location
- OY757190.1:94188848-94208729[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 5.7e-07 6.2e-05 24.2 1.4 2 23 1767 1788 1767 1788 0.97 2 9 7.2e-07 7.8e-05 23.9 0.5 1 23 1794 1816 1794 1816 0.98 3 9 6.8e-07 7.4e-05 24.0 0.6 1 23 1822 1844 1822 1844 0.98 4 9 3.7e-05 0.0041 18.5 0.5 4 23 1855 1874 1850 1875 0.92 5 9 0.00038 0.042 15.3 2.9 1 23 1880 1902 1880 1902 0.97 6 9 0.00019 0.021 16.3 3.6 1 23 1908 1931 1908 1931 0.98 7 9 0.0006 0.065 14.7 2.1 1 23 1937 1959 1937 1959 0.98 8 9 0.00015 0.016 16.7 1.2 1 23 1964 1986 1964 1986 0.98 9 9 0.016 1.7 10.2 0.3 2 23 1993 2017 1992 2017 0.94
Sequence Information
- Coding Sequence
- ATGAGTCCAAGAAAACTACGGTCTGCTAGTACTAAAAAGGGAAATAACGACAACAATACCACGGAATTAACGACGATAGAAACCCAAAACACCGTTCCAATTGTACACACCAACGCAGTTACACCCTTGATGTCCCTAAGATTTCTTTCTGATTTCGGGCCACAAACACACTCATCGGCCGAAAGTAACACTACTATCACACCACCTCCGTATAGCGATCTGACAGCCAAAGAAATTAGCGAATTAGGAAGCAACAATAGTTTGCGAAACCAACAAACCATGAGTCGACGGAACCCAAGTAATCCACCATCGAATGAAGTTAATCTGCAAAATGGAGCTAATAATCCGGATGACTCGGCAATCAGACAATATGTAAATGCATCCGTAGAGGCTACCATTACTAGAGAGATGCAAAATATGCAACTGATGTTACCACAAATGATAAGAGAATCCATTAGATCGGAACGCAACTCTTCATTTGGGGATCGAAACAATCAAGGTCGTCTATCTCTCGCTGCTGATCAGTCATACCAGCCACCTCCAAATCTTCAACGACCACAACCATTATTTCAACAAAACCAGTTCTACCAAAATCATACCCAACACCTCGAACCAGTACACAACCAACAGCAACGACAATATCCATCGCGCGCACCACCCGCATTTGCCAATGATCCGCCGCAATTTCGACAAccaactttaaataataatattcctCAACCATATCTAGCGTTCGATTtaccacaacaacaaaatggGACAAATCACACATCAATGTCTCCTAATCAGCTGGAGAAGTGGGGAATAAAATTCGACGGTACAAATAAATCTTTTACCGTCGAGGATTTCGTGTTCAGGGTCGAAATATTGAGGAGTGATTACAATTGTTCGTGGGACGCAGTGATGAAAGGTTTCCACCACTTGGTTACAGGCGCAGCTAGTACATGGTTTTGGGCGTTTAGAATGAAATATCCAGTATGCGATTGGTTCACGTTTAAACATCAAATCATAAGAAAATTCCGAAGTTTCGAAAGTGATTTTGAAATTCAGAGAAAGATTATGGAGCGTAGGCAAATGTTGAATGAGTCAGCTGACGCGTACATTTCAGAAATAGTCCGGCTGAAGAATCAAATGAGAGTTCATGTAGTAGAAAGCGAATTGGTGAAAATcgtaaaagacaatttaaaggACAGTTTATCGCAGCtagtttttccaataaaaatcgATAGTTTAGACCAACTCTTGGAAGAATGCAAGAGAGCAGAGCGAAATATCGCCAAGCGATCATCGAACCGTATTCCGTTAACCAACAGTCGAAAACTATATGAAATCGATGCTAACGCAGAAGTAGATACAGAGGAACCAACTTATTCAATTGAGGCCATCCAACGAGAAAAATACAATGGAAAGTTATTGACTTGTTGGAATTGCAAGCCCAACATGCCCAAGATGTTTGGAAAACAGTCGGCAGAACATGCGAAAGGCTGGGCCAGCGTGTTCAGGCTTCAATACCGCCCAGTAACAGACAACCTCCTTCAGTCCCTGCTTGTAAGAACGGATTATCAAGAAAAGGAAAATACACCTAGTCAAAAGGGTGATAAAATGAAGATCAATACTCAAACTCATTTAGATAGTAATCAGAGCAGTAAGAGCAATAACGTTTTAGATAACTATGAATCAACGTGGGAACATCTAGACCAAGTTTTGACAGAAAAGTTCCGAAAAACAGACGATACATTAAGACAATCGCATAAAACCACAAACAGTCGTGAATTTAAACCCACATCGATTATGAATCGCGATACTAGCACCAACCTTCTACACTTTACAGATTATGATACCCCAGAACAACACAACCAAAGTAAAGCCAAGGATAATACCAAATTTCAAACTAATTTCGACTACAAGCTTCCTTATCATGAACGTTTGGCGAAATACAATGAGACGCGATCAAAAATCTTTGCCGACTGTGTTCCTGTTatcagcaataaaattttaaaaaccagaaaaagatacactgaaagaaaagttgaaagaaaatatattgcCTCCACAACCATTGGCTCTGTAGAGGATATACGACCCTATATGCAAGTCACCGTTGATGGGTCCCCATTCCAAGGTCTCTTAGACAGTGGCGCATCTGTAAGCTGCTTGGGAAATAATTGCTTAGACAAtgtcaacaaaataaaaacagctgatgggAAAAGACATTTGATCATAGGTAAAATAGTAGCTAGAATCGGTTACGGTAACAAATCAGTTGAAGTTACCTTATATTTGGTACCAAACTTAAGCCAAGAGTTAATCCTAGGTTGTGATTTCTGGCAGAAAATTGGCCTGAAGATCTGCCTTAAAGATAAGATTGTAAGCGAAATAACTTTTACGGATTCAGACGGGTTCGAGATGCACAACCTATCACGTAATCAAGAACAGATCTTGGAGCGAGCAAAAATGTCTTTCAAATGCTACACTCAATACGGACTGGGTAGAACGAGCTTGGAGACACACATGATAGATACAGGAGATGCTCCGGCGAAGAAGATGAGATATTATCCCGTGAGTCCAGCGGTACAGAAACTAATTTTTGCCGAAATTGACCGAATGATTGAGCTAGATGTTATCGAAATAGCCACTTGCGCCGAATGGAACAACCGCACAACGCTTGTAAtgaaaccaaataaaaacagactCTGTCTAGACGCAAGAGAACTAAACCAAGTCACCAGGAAAGATGCCTATCCGCTCCCGAATGTCGACGGACTGCTGGCAAGACTGGGTGACACACATCTCATTTCAGCAATCGACCTTAAAGATGCGTTTTGGCAAATCCCTCTGGATAAGGCAAGTCGATCCAAAACCGCTTTTACCGTTCCGGGGAGGCCGCAATACCAGTTTAAGGTTATGCCTTTCGGTCTTTGTAACGCCGCGCAGAGACTTTGTCGATTGATGGATAAAATTGTGCCATCGGAGCTGAAGGAACGCGTCTTTGTATATCTCGACGACCTTTTGGTAGTATCATCAACGTTTGAAGAACACATGGAAATGCTCAAACAAGTGGGTCAAAGATTGTCTGCTGCAGGCTTGACAATAAATATGCAGAAGTCAAAATTTTGCTACAAGGAGCTAAAATATCTGGGCTACATTGTAGGCGGAGGTAAGCTTAAGCCCGACGAGAACAAAGTCAAAGCAATTCTGGATATTCAACCCCCTAGAAACCAAAAGGACGTTAGAAAATTCCTGGGAACCGTAGGGTGGTATCGTCGTTTTATCCCAGAGTTTTCTACTTTAACTGCACCTCTTACCGACACCCTCAAGAAAGCTCCAAAATTTCAACTGACCGATCCAGCTATACGAGCCTTTGAAGAATTGAAACACCGTTTAGTCTCAAGTCCAATACTGTCAAGTCCAGATTTCGAAAGACCTTTCTTTGTGCAGTGTGACGCATCTAACGTAGGCATTGGGGCAGTTCTGTTCCAAAAAGACGACGAGGATGGGGAGCATCCCATTGAATATTTCTCTAGGAAGTTAAACAGTGCGCAAAGAAATTATTCAACAACCGAAAAAGAATGTCTCGCCGTGGTGCTTGCAGTTGAAAAGTTCAGGCAATACATCGAGTTGATGGAGTTCACCGTTATCACGGACCATTCCTGCTTGAAATGGCTAATGCGCCAACAGGATTTAAACGGACGACTAGCTCGTTGGAGTCTGAAGCTCCAAAGTTTCAAATTCTCCATTGAGCATCGAAAGGGTTCGAAGAACGTAGTCCCCGATATGCTTTCTAGACTGAATATGGAGGAGGTAGTACTAGACAACAACCCTATCATTGACTTTAACTCGGACGCTTTTAAAACCGGAGATTACAAGTCATTGATAGATACTGTCGAGCAAAACCAAGATAGGCTACCAGACCTAAAAGTTGAAGGCggaatagtatttaaaaaagttaaatttaaccaTGACACTCTAGAAGCTGAAAACGAATGCTGGAAGATATGGCTACCACTTGAGTTGACAAATAACATCATCGAGAGATCCCACATAAACAATACTTCGCATGGCGGCATCGCTAAAACACTGTATAATGTCCGTGAATTCTTCTACTGGCCTTCGATGGTAAAGCACATTAAAAAGTTCCTGCAAGATTGCGATACCTGTAAGGAAATCAAGCACCCAAAGCAAACATTACGCCCACCAATGGGAAAAAAAGTGGAAACGCAACGACCGTTTCAGAAAATATATGTCGATTTCTTAGGTCCATATACTAGAACACGATCCGGCAATACTTTCATTTTCATAGTTCTTGACCACAATACTAAATTCGTGTTATTAAAGGCTCTTTCTAATGCTACAACTAAGGCAACTATAAAATTTCTGCGGGATGAAGTGTTTTTCAAATTCGGAGTTCCCGAACAAATACATTCCGACAACGGAAGGCAGTTTACAGCCGAAGCCTTTAAGGAATTCCTACAGGTTTTTGGAATCAAACACATCCGTACACCGATCTATTCACCCCAGTCAAACGCCAGCGAGAGGGTTAATCAAACGATACTCAGCTCTATACGCAGTTACTTGGACAATGATCAAACTAGGTGGGATGAGAACTTGTCTAAGATTGAGTGTTCCCTCCGGTCAACCGTACATGCGTCTACAGGAGTCAGCCCCTACTTCGCTTTAACTGGATTCAACATGATCACGCACGCAGATGCCTACAAAATATTACGCAAATTAGAAGCCGTTCAGGATGGCGAAATGATAATATTACCCAGGTCATCACAGATGCAGCTAGTCCACCAAAAACTAAGCGAAAAACTACACAATGCCTACCAGCGGAACGTTAAATCGTATAACCGTCGTACCAAAAGCttGTTCCAAGTACCTGGCTATAATATACCAACGTGTGTAAAGTGCTCGGAACATTTGACAAACAGTGGCAATGGTTTTTATCAGGCAGTAGCTGCCAGTGCTACTGGTCAGCCGGCATTGGCGGCAACAATTGCTGCTGCAAATGCCAATAGCAATAACAATAGTAATACGAATACTGCAACCACTAATAATACCAGCAATACAGCGAACAATTTGAATCAACAACAAATGCCTCAACAACAGCTTCAAAACTCTACCAATTCGACGAATAGTCTACAATCGCAGGACGATTCGGAAGAAAGAGTGCAACAAACACCACGCCGTCCGCGTAAAAACGGTGTTAATAAAATCCAACAAATCACGATGTCCTCCTATGAATTGGAGAAGACCATACAACATTTAGATGTGGACTTAATATTCAATGAAGAAGGCTCATGTCCTTTATgcaataaaacattttcaaggAAATCCTCTTTAATAACACATATACGCAATCATGCAGCTGAAAGGaaatttgtttgtaattattgcAATAAAGgttttacTCAAGCGGCCAATTTGAGAAATCATGAGCGCATACACACCAACGATCGTCCTTATGTTTGTGGAGATTGTGGCAAAACATTTACCCAGATTACAAATCTTAACAATCACAGACGTTTGCATACAGGCGAGCGGCCATTTGTTTGCATTGAACCCGAATGCGGTCGCTCTTTTGCCCAAGTGACCAATCTTAATAATCACATGAAAACCCACCACAAAGTCCAGCAATATTGTTGTAATCAATGCCCGAAAAAGTTTACACAAGTCACCTCGCTCAATCAACATTTACAGGCTCATGCCGGCATAACTGGTTACTATTGCCCTCGATGTCCGGAAAAGACTTTTAAGCAACAATCCCAGCTACATACCCATATGAAATCGCATGGCCTTCAGTATCCATTCGAGTGTACAAAATGTGATGAGAAATTTTTGCAGCAGGCCCACTTGGAACAGCATCTGAAAATGCATGATGAATTCAAATACAAATGCAACATTTGTCCCAGCTCGTTTAATCAGGAAACACTACTTAAAAAGCATGAACAACGTCATTTAGAGGGCAGGTACCTCACTTGCCCTGTGGCCAATTGCAATGAGGCCTTTGCTGTTCGGCAACATCTTTCGAAACATTTGTTAAATAGTCATTCGCATACCGAACTACCGCCTCCAAAACGCTCCAAGAAATGTATAACATTACAACCGCCTCAACAGCCTGTTACCATGGTTGGTCAGCCATTGTCCTTGCAACATGCTCCCCAACGTGGTCGTCCTCCTAAgaataaaaataaggtaaattctttaaatattccaTCATTGATAAAAATCGAAATTAATGATGCTCTGAATTATAATCAGCCAAGTATAAATAATGTAAGTGGTCTTTCGATACCACAACAAATAAATCAACACttgcagcaacaacagcagcagcagcttcagcagcaacaacaacaacagcagcaacaacaacaacaattattacAACAGCAACAGCATCAATTGCTATTGGCAAATCAGGTTAAAGTCCGTTATGTACCCAATAATCAAGTTAAATAG
- Protein Sequence
- MSPRKLRSASTKKGNNDNNTTELTTIETQNTVPIVHTNAVTPLMSLRFLSDFGPQTHSSAESNTTITPPPYSDLTAKEISELGSNNSLRNQQTMSRRNPSNPPSNEVNLQNGANNPDDSAIRQYVNASVEATITREMQNMQLMLPQMIRESIRSERNSSFGDRNNQGRLSLAADQSYQPPPNLQRPQPLFQQNQFYQNHTQHLEPVHNQQQRQYPSRAPPAFANDPPQFRQPTLNNNIPQPYLAFDLPQQQNGTNHTSMSPNQLEKWGIKFDGTNKSFTVEDFVFRVEILRSDYNCSWDAVMKGFHHLVTGAASTWFWAFRMKYPVCDWFTFKHQIIRKFRSFESDFEIQRKIMERRQMLNESADAYISEIVRLKNQMRVHVVESELVKIVKDNLKDSLSQLVFPIKIDSLDQLLEECKRAERNIAKRSSNRIPLTNSRKLYEIDANAEVDTEEPTYSIEAIQREKYNGKLLTCWNCKPNMPKMFGKQSAEHAKGWASVFRLQYRPVTDNLLQSLLVRTDYQEKENTPSQKGDKMKINTQTHLDSNQSSKSNNVLDNYESTWEHLDQVLTEKFRKTDDTLRQSHKTTNSREFKPTSIMNRDTSTNLLHFTDYDTPEQHNQSKAKDNTKFQTNFDYKLPYHERLAKYNETRSKIFADCVPVISNKILKTRKRYTERKVERKYIASTTIGSVEDIRPYMQVTVDGSPFQGLLDSGASVSCLGNNCLDNVNKIKTADGKRHLIIGKIVARIGYGNKSVEVTLYLVPNLSQELILGCDFWQKIGLKICLKDKIVSEITFTDSDGFEMHNLSRNQEQILERAKMSFKCYTQYGLGRTSLETHMIDTGDAPAKKMRYYPVSPAVQKLIFAEIDRMIELDVIEIATCAEWNNRTTLVMKPNKNRLCLDARELNQVTRKDAYPLPNVDGLLARLGDTHLISAIDLKDAFWQIPLDKASRSKTAFTVPGRPQYQFKVMPFGLCNAAQRLCRLMDKIVPSELKERVFVYLDDLLVVSSTFEEHMEMLKQVGQRLSAAGLTINMQKSKFCYKELKYLGYIVGGGKLKPDENKVKAILDIQPPRNQKDVRKFLGTVGWYRRFIPEFSTLTAPLTDTLKKAPKFQLTDPAIRAFEELKHRLVSSPILSSPDFERPFFVQCDASNVGIGAVLFQKDDEDGEHPIEYFSRKLNSAQRNYSTTEKECLAVVLAVEKFRQYIELMEFTVITDHSCLKWLMRQQDLNGRLARWSLKLQSFKFSIEHRKGSKNVVPDMLSRLNMEEVVLDNNPIIDFNSDAFKTGDYKSLIDTVEQNQDRLPDLKVEGGIVFKKVKFNHDTLEAENECWKIWLPLELTNNIIERSHINNTSHGGIAKTLYNVREFFYWPSMVKHIKKFLQDCDTCKEIKHPKQTLRPPMGKKVETQRPFQKIYVDFLGPYTRTRSGNTFIFIVLDHNTKFVLLKALSNATTKATIKFLRDEVFFKFGVPEQIHSDNGRQFTAEAFKEFLQVFGIKHIRTPIYSPQSNASERVNQTILSSIRSYLDNDQTRWDENLSKIECSLRSTVHASTGVSPYFALTGFNMITHADAYKILRKLEAVQDGEMIILPRSSQMQLVHQKLSEKLHNAYQRNVKSYNRRTKSLFQVPGYNIPTCVKCSEHLTNSGNGFYQAVAASATGQPALAATIAAANANSNNNSNTNTATTNNTSNTANNLNQQQMPQQQLQNSTNSTNSLQSQDDSEERVQQTPRRPRKNGVNKIQQITMSSYELEKTIQHLDVDLIFNEEGSCPLCNKTFSRKSSLITHIRNHAAERKFVCNYCNKGFTQAANLRNHERIHTNDRPYVCGDCGKTFTQITNLNNHRRLHTGERPFVCIEPECGRSFAQVTNLNNHMKTHHKVQQYCCNQCPKKFTQVTSLNQHLQAHAGITGYYCPRCPEKTFKQQSQLHTHMKSHGLQYPFECTKCDEKFLQQAHLEQHLKMHDEFKYKCNICPSSFNQETLLKKHEQRHLEGRYLTCPVANCNEAFAVRQHLSKHLLNSHSHTELPPPKRSKKCITLQPPQQPVTMVGQPLSLQHAPQRGRPPKNKNKVNSLNIPSLIKIEINDALNYNQPSINNVSGLSIPQQINQHLQQQQQQQLQQQQQQQQQQQQQLLQQQQHQLLLANQVKVRYVPNNQVK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -