Mror022573.2
Basic Information
- Insect
- Melanophora roralis
- Gene Symbol
- hang_1
- Assembly
- GCA_963583895.1
- Location
- OY757190.1:44759917-44781577[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.14 15 7.3 1.4 2 23 451 473 451 473 0.93 2 18 0.36 39 6.0 3.5 3 22 576 595 574 595 0.90 3 18 0.0053 0.57 11.7 0.9 1 22 670 691 670 693 0.90 4 18 0.0016 0.17 13.4 0.2 3 23 806 827 805 827 0.96 5 18 6.9e-05 0.0075 17.7 0.1 1 23 835 858 835 858 0.94 6 18 0.00046 0.05 15.1 0.1 2 23 947 968 947 968 0.97 7 18 0.0062 0.67 11.5 4.6 2 23 1015 1037 1014 1037 0.95 8 18 0.0054 0.59 11.7 0.2 2 23 1046 1068 1045 1068 0.95 9 18 0.0037 0.4 12.2 0.1 1 23 1081 1104 1081 1104 0.95 10 18 0.0016 0.18 13.3 1.1 1 23 1164 1186 1164 1186 0.99 11 18 0.0026 0.28 12.7 0.9 1 23 1194 1217 1194 1217 0.96 12 18 0.037 4.1 9.1 0.1 2 20 1225 1243 1224 1243 0.95 13 18 4.6e-05 0.0049 18.2 0.2 3 23 1307 1327 1306 1327 0.98 14 18 0.00018 0.02 16.3 0.7 1 23 1362 1384 1362 1384 0.97 15 18 0.00053 0.057 14.9 0.7 2 23 1470 1492 1469 1492 0.91 16 18 5.1 5.5e+02 2.4 0.3 3 20 1513 1530 1512 1532 0.90 17 18 0.24 26 6.6 0.9 3 23 1547 1567 1547 1567 0.97 18 18 0.0032 0.34 12.4 0.2 1 23 1817 1839 1817 1839 0.98
Sequence Information
- Coding Sequence
- ATGTCGGATGAACAACGACAACAACCAAGCCAACCATCACAGCAGCTGCAAAGGAGACATAACTGCTGTCGTCTTTGTTTAGCTCCCGATAATGAATGTATATCAATTTTGAATAGCTACGCTGCCGATAAAGAACCTTTGGCCACAAAAATTTATGCTTGCGTGTCGGTTAAGATTACCAATTATGATAACTTATCATTGCGCATCTGTCATGCCTGTATAAGTTACTTAAACTCTTGGCAATCGTTTAAGAATCGCTGTCTGACAGCGCAGGTCAAACAACGCTCATGGCTTGAGGAAACATCAAACAAATCAATACAATCTGATCAGTATGATGATCAACAGCAGCAGTCACAGCAGCGGCAACATTATCAAACACAGGATGAACAACAATTATTGTCTTCTTCCATATTAGAGGGaatttcaacattaaaaaaacgcaAATCGTTAACAGTCTATGTGAGTCCTAAATTGcaacaaactaaaaaacaacaacaagaaaaattattaccAAAACAGCAACTAAATATTGTAATGCCGTTAACAAAACGTCACTATACCAAACATAAACACAATAAGTCACAGCGACAAACGCAAAGTCAAACAACGCACAATACTTCTACGACAACACGTAATGTACAAGCGTCGTCGTCATCGTCGTCATTCTTATCATCATCTAATAAAACGAAACATAAAGCGGATAAGAAACAAGTATCGGCTAATTTGCAGCCTTTATTAGCTACATGTTCTCCCCTTCATCAACAACCATTTGTTATTCCAGCAGTTCCTAGAACAACTGCTACCGTAACTTCTGGCACTGATACTGCGACAACTGTGACAAGTGCTGTAACAGTAAAAGATACCAATAAACTTGCCAccacaacaattttaaacactTCGACAACTGCAGTAGTAAGCAGCAGTTGTAACAATGCTGTTAAGACAACAGCATCTTCTGCTGCTGTTTTTTCTACTGTAAGTTCTGGTTTTAGTGATGAGTGTTTGATTAGGGGTTCAATGGCATCCTCGTCGTCGGCCGCTTGTACAAGTGCTGTTCAACAATTGCGTTTGTTTAGACGATACTCCTATAATccGTTACCTGCAGTACAAATAAAAGACGAACCACTTGAGGCGGACGATGATTATAATGGATCAAAAcatcagcagcagcaacaacatgaTGAATCCGATGAAATGGTTGTGGATCCCACCATGTTTTTAGAGCGTACCGCTGATGAGGGTGATTATATGgaaTCAAATTCTAACTTTGATTATGAAGTTGTTAGACCACCGGCAGACCTAAAATCCTTACCAGCTAGTACCACTATACGCGTCAGCACTAAAGACGCTACCTGCCGtgcttgtaatttaaaattttcaacgcGCGCCAATGCTAGACGCCATGAAAAGAACCTACACCCTAATTTGTTTGAAACTCTAGAGGAAAACAAGCAAGCCGTTAATAAACAAGCGGCCGCTTTAAATGCCTCTTTAGAATTGCAAAGAGCCGTAGCAGCAGCTGTGGCCGCTGATGCTTGCAAACTGTCCAGTGGTGCTGTTATAACACCGCAAAAATTCCGTCAAGAAGttgtaaatgcttttaataacaGTGAATTTGGTTTCGATTATGACAATCCAGAGAAATATCGTGAACTCTTGACAGAtgagaaaattattttcctaCAACAGAACGATGAATTCCTAAGACAATATCAAAATATGACTTGTCGTTGCTGTAACAAATACTATACTACCTATAAGAATTTCATGGCTCATATGCGTAAAAAGTACCTTACTTTGCCCAGAAATTGTTGCTTTAACTGTCTGAAATTAAACGATTCGAAGGCACTCTTTATATCACATTTGAAAAAGCGCAATTGTATTAACTTGCATAAAGTGTTGCAAAATCTTATGTCTAAAAATGCCAACTTTGCAGCAGCTGTTTCGGCCACTGTAGCGGCGGCACCCGAAAAAGTTCGTGCCAAAGAATTGCTGGTAAACAAAATGTACGAGTGTAAGATTTGCTCAAAAGTTTTTCGCCTTAAATTAGAATTTCGCTCTCATGTCTATGACGAACATGCCGATATACAACGCAAGGATGTTAGCAATACCCAGTGTTGCTATTGTGCTGTCAGAATTGAAGATCCTGCCGACCGCAAACGTCACTATAATAATATGGATTGTATTGTTATTTTGCATTGTGTTACTTGCGATACTAAACACGAGACTCAACAGAAGTTTATGGAACATGTGCAGGAAAAACATTTGGCCAACTTTGGCGAACAGACAAAAACAGAAGATGACAGTTTGTCAAATAAAGTAATGGCAGcTGATGATTCTCGCGGCAGCCAGTTTAATGTTTCACTTATTAATACCACTCCCAAGACACAATACTTTTCACGTATGCCACAGGCCTGTCCGATATGTGGTCAGCAGTACAACAATTACAACAATGTACTGCGACATATGGAATCGAAGCATCCAGATCAATTGCCACAAACCTATAAATGTGTTAAATGTGGTCAAGGTTATCCAAGATTATCTAATCTGCGTGAGCATATGGTCAATGCTCATGGTGCCGACAAAGCACGCCACACTGCATTTGAGTACATTGTAAATGCAGATGCAGTTAAAAATGCAGCCGGATCACCAGCGCCACCACAAAACCCCTACACTGGCCGTTATGATTATGTTATGAAGGATTTGATGTCAATAACAAATGGTGGGACAGTTGctGACAATGACTCTGAAAGAGGAAATGTAAGCAAGAAAATGCGTATGGAAGCAAACacttcaaataataataacaatgtcACGGTATCTAGTCCTGGCCCTCGCGAATGCTCCATTTGTAGTGCTGTATTTGCCAATAACATTGGTCTCTCTAATCATATGCGTTCACATCAAAGTGCCCAAAACCATAATTTTGGTGGCTCGTCTGCAAAAACAGAAAGAAATGCTGGCCAATTTGCTGGGACGGGCCAACAGCAAGTATTAAGAAAATCTTTAGAACAAGCAGCTGATAAACGTTTTCGACGTATGCGTTGTCGTATTTGCCAACGTCGTTTTTCTTCGAAAAAATCCTATCGCTATCATATGCTACACGACCATCAAATTCGCAATGTacaatttataaaatgcaaactcTGCGATGCTGAGTTTGCATACGAAAAGGGTCTAAAAGTGCACATGTTTAAGATACACAATACCCTGTTAAAGGATGATATGATTATAAAACAATATGAATGCGAAATTTGTTCAATAGTCTATCGTACCGATGTTGAATTGCAACATCATTTAGCCAATGTACACAATAAACATGGAGAACCCTCAAATATGGACGATGATGATGAGGCCTACAATGCGGATGTGTCTATGGCAGGTGGTGTTGCTGACAATAGTTCAGCGGGTGCTGATATGTCTGGCATATTCACACCCGTTAGTGCTGTTGGCTTGGGAGACACTCCAGCTAGTGGTTCCCTATACTGGTATCAATGCAAATATTGTGCATCTaactttaatacaaacaaaaagctTGCCATTCATATTAACTCACACGATGAATTTGATTCCAATGACTACTCTTGCAAAGATTGTGGCAATGTTTATAGTGGACGAAAAAGTTTATGGgTTCATCGCTACAAAAAACACCCCCAAATTCCCGAACCCTCAGAGTGTGTTATGTGTAAGAAGGTGTTCTTTGATGCTCAAATGTTAGAAAATCATATACCCTCGTGTAATCGCAAACCCATCACTCAAGCAGTCGGTGACAGTACTACCGCCgtatataaacataaaaccGGCGATGATGAGGATGATGACGATGATCAAAAGTCTCGTGAAGCCGACAGCAGTTTATCTACAACCATAAATGCAACATTGGgcagtaatttaaaaattaaactgccCGAAGTTGCTTGCACGATTTGTGGTGCTCGTTTCACCGATCAGGATCTGTTTGCCAAACACATACAAAAACACGAAATGGAGCTGTATACTGACAATCCTTTGGCGGCCATGTTTGATACTGGACCCGCCaatccaaatcaattttatatGGATCGAATCAATGATAACGGCGAGTATGCGTGCGATTTGTGTTCGAAAACATTTACACAAATGACAGCACTTAAAGTGCATAGGAAATGGCATTTCAGAGGTGATAGCAAACAGAACGAAGCCGATCAACCTTTGTcgagcagcagcagcagcattcAACACTCACAACAACAACTGaacaaaaaccaacaacaactgcaacagaagcaacaacaacagcaacagtcGACACCGAAGATGCCAATCAACCGTCAACATCTACTGGGATTACAAGCGGTGGGTCTAATGCCGCGCCAATTTGCTCATACGGGTGGCAACCACAGAGCCCAAAAACGTAAGCGTGAGCTTCGCTGTCAGTACTGCCCATCCACTTTTATTAGCAATAATAATTTGCGACGTCATCTTTACGAGTTGCACAAGAATGAAATGGGAAATTTGCCCGAACCACCGAGAATCGAATGTGATGCCCCCAATATGTGTCGAAGGTGTAATGTTAAGTTTGAAACAAAATTCGAATGGATTGAACATAAAGTGACAGAGGCCAGAGTTATGAGACCATTTGGGCCGTTTCAATGGGGTTGTGATTTGTGTGGAGCCTATGTATCGCGCAAGGAGAAATTAGTAAATCATTTGCACAATCATATGAAAGAACAAGTGATAGTACCGGTCGAACATTCAGAACCGAAAAACCAACAAACAACTGAAAAGTACGGGCAACTGCAAAAACAAACGACAGctccaaatcaaaataaaaatcaggcCAAAGAGGGTGATGTTATGCCAGAGtttaaaaggattaaaataCCTTCTTTGCCCGTGAAGCAGAAAGCTGATGAAGATGGATCAAGGGACAGTGTTAAATATGAATACGAAGAAGACGATGTGGATAATGATGATGAAGAGGATGATTATAAGGGAGAAGACGACGCTGATGCAGAAGCTGATGCTGAGAAACCAAAAGAACAGAGGCAACCTGCTGTTGATGAATTCGACGACGAAGAAGAGGGAGAGGAACCAGTTGAAGGAGAAGAATTTGATGATTTGGCCGTTGGAGCTCAACAGACGGTGGGTGGCGATGAAGACGTTGGCgatgatggtgatgatgatgaGGAGGAGGAAGATGAGGATAACGACGATGATAATGAGAGTAGTGATGCCGATGATGAAGACCACTCGACTAGCGGGGATACAAATGAGGCTTCTATTCCTAAAGGCAAACCGACAAAACTAACACCAATTCGCAGTTACAACGACACTGAAATCGAAGAAAACGACGAAGGGGCTGAAGATTCTGATGAATACGATGACGATGAAGATGATAACTCATCAACGGACATTCAGAAGCCGTCTTCTTCAACTGCAACCAGTAATGCTCCAGCAAAATCTCGTTATTCCTGTGATTTGTGTCAGGTTTATTTTGGCACACAACCAGAATTGCAACAGCatgttaaaatgcattttctaaATGGTCCCGGCTCGGTAACATTAACTGAAATAAAGTCCCTATCAAAATCCTCATCAAACAAAAGTCGCAGCAGTAGCAGTGACGTTGTTGCCGTATAG
- Protein Sequence
- MSDEQRQQPSQPSQQLQRRHNCCRLCLAPDNECISILNSYAADKEPLATKIYACVSVKITNYDNLSLRICHACISYLNSWQSFKNRCLTAQVKQRSWLEETSNKSIQSDQYDDQQQQSQQRQHYQTQDEQQLLSSSILEGISTLKKRKSLTVYVSPKLQQTKKQQQEKLLPKQQLNIVMPLTKRHYTKHKHNKSQRQTQSQTTHNTSTTTRNVQASSSSSSFLSSSNKTKHKADKKQVSANLQPLLATCSPLHQQPFVIPAVPRTTATVTSGTDTATTVTSAVTVKDTNKLATTTILNTSTTAVVSSSCNNAVKTTASSAAVFSTVSSGFSDECLIRGSMASSSSAACTSAVQQLRLFRRYSYNPLPAVQIKDEPLEADDDYNGSKHQQQQQHDESDEMVVDPTMFLERTADEGDYMESNSNFDYEVVRPPADLKSLPASTTIRVSTKDATCRACNLKFSTRANARRHEKNLHPNLFETLEENKQAVNKQAAALNASLELQRAVAAAVAADACKLSSGAVITPQKFRQEVVNAFNNSEFGFDYDNPEKYRELLTDEKIIFLQQNDEFLRQYQNMTCRCCNKYYTTYKNFMAHMRKKYLTLPRNCCFNCLKLNDSKALFISHLKKRNCINLHKVLQNLMSKNANFAAAVSATVAAAPEKVRAKELLVNKMYECKICSKVFRLKLEFRSHVYDEHADIQRKDVSNTQCCYCAVRIEDPADRKRHYNNMDCIVILHCVTCDTKHETQQKFMEHVQEKHLANFGEQTKTEDDSLSNKVMAADDSRGSQFNVSLINTTPKTQYFSRMPQACPICGQQYNNYNNVLRHMESKHPDQLPQTYKCVKCGQGYPRLSNLREHMVNAHGADKARHTAFEYIVNADAVKNAAGSPAPPQNPYTGRYDYVMKDLMSITNGGTVADNDSERGNVSKKMRMEANTSNNNNNVTVSSPGPRECSICSAVFANNIGLSNHMRSHQSAQNHNFGGSSAKTERNAGQFAGTGQQQVLRKSLEQAADKRFRRMRCRICQRRFSSKKSYRYHMLHDHQIRNVQFIKCKLCDAEFAYEKGLKVHMFKIHNTLLKDDMIIKQYECEICSIVYRTDVELQHHLANVHNKHGEPSNMDDDDEAYNADVSMAGGVADNSSAGADMSGIFTPVSAVGLGDTPASGSLYWYQCKYCASNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQIPEPSECVMCKKVFFDAQMLENHIPSCNRKPITQAVGDSTTAVYKHKTGDDEDDDDDQKSREADSSLSTTINATLGSNLKIKLPEVACTICGARFTDQDLFAKHIQKHEMELYTDNPLAAMFDTGPANPNQFYMDRINDNGEYACDLCSKTFTQMTALKVHRKWHFRGDSKQNEADQPLSSSSSSIQHSQQQLNKNQQQLQQKQQQQQQSTPKMPINRQHLLGLQAVGLMPRQFAHTGGNHRAQKRKRELRCQYCPSTFISNNNLRRHLYELHKNEMGNLPEPPRIECDAPNMCRRCNVKFETKFEWIEHKVTEARVMRPFGPFQWGCDLCGAYVSRKEKLVNHLHNHMKEQVIVPVEHSEPKNQQTTEKYGQLQKQTTAPNQNKNQAKEGDVMPEFKRIKIPSLPVKQKADEDGSRDSVKYEYEEDDVDNDDEEDDYKGEDDADAEADAEKPKEQRQPAVDEFDDEEEGEEPVEGEEFDDLAVGAQQTVGGDEDVGDDGDDDEEEEDEDNDDDNESSDADDEDHSTSGDTNEASIPKGKPTKLTPIRSYNDTEIEENDEGAEDSDEYDDDEDDNSSTDIQKPSSSTATSNAPAKSRYSCDLCQVYFGTQPELQQHVKMHFLNGPGSVTLTEIKSLSKSSSNKSRSSSSDVVAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -