Basic Information

Insect: Melanophora roralis
Gene Symbol: ham
Assembly: GCA_963583895.1
Location: OY757188.1:85130587-85177939[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.023 2.5 9.7 0.0 2 21 288 307 287 310 0.87

2 9 0.1 11 7.7 4.6 1 23 317 340 317 340 0.92

3 9 1.7e-07 1.8e-05 25.9 3.3 1 23 346 368 346 369 0.96

4 9 2e-06 0.00021 22.5 1.7 1 23 375 397 375 397 0.95

5 9 2.4e-05 0.0026 19.1 4.9 1 23 403 425 403 425 0.99

6 9 0.00034 0.036 15.5 1.1 2 21 433 452 432 453 0.95

7 9 1.2e-08 1.3e-06 29.6 1.2 1 23 912 934 912 934 0.99

8 9 4.1e-07 4.5e-05 24.7 0.9 1 23 940 963 940 963 0.97

9 9 7.1e-05 0.0077 17.6 6.6 1 23 969 991 969 991 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.023	2.5	9.7	0.0	2	21	288	307	287	310	0.87
2	9	0.1	11	7.7	4.6	1	23	317	340	317	340	0.92
3	9	1.7e-07	1.8e-05	25.9	3.3	1	23	346	368	346	369	0.96
4	9	2e-06	0.00021	22.5	1.7	1	23	375	397	375	397	0.95
5	9	2.4e-05	0.0026	19.1	4.9	1	23	403	425	403	425	0.99
6	9	0.00034	0.036	15.5	1.1	2	21	433	452	432	453	0.95
7	9	1.2e-08	1.3e-06	29.6	1.2	1	23	912	934	912	934	0.99
8	9	4.1e-07	4.5e-05	24.7	0.9	1	23	940	963	940	963	0.97
9	9	7.1e-05	0.0077	17.6	6.6	1	23	969	991	969	991	0.98

Sequence Information

Coding Sequence: ATGTCTCTGCCCGAGTTTAAATGCAGCACAGTTGAAGATTACGATTTCGGTGGTGCTTTCAAACAATATCCCAATAACCTGGCCTCGCCCGATTCAACAAATACCCTTAGACTGGCCACAAACACTAGTGATATTAATAGCTACCCTCACAGTAGTCATCGTCTAAACGGCTATAGTCAAAGTAGTTCACCTAGTCGAAGTGTATTGGGCGTAGATTCGACTACGCTGGTCAATGCATTGCCTCACTCACCAGCCCATATGGAGCATTTGTTTAGTAGTAAATTGCATGCGGAAAGGCTTTTACTAGAGCTAACGACATGCCTGTCAGAACCAAACTGTGATTTGAAATCAAATGAAGGCGAAGCAGGAGTATATGCCAAACAGTACTTAAGAAGAGGGACAAGATTTGGACCCTTTGCCTTGACGGAGTCAACAGAGAAGTCTAATGCATGGGATaTCTTACCCATTTCCCATATACGCAGCCTGCTGGAACCCTCACCTGAAGTAAAGacgttactgaaaaaaattcgCACTTCTTCGAATTCGGAATGTGAAAAAGAggctaattttaataatttttatgtggcCGGCTGTctTTGGTATGAATCCAATCGTGATATAGAGGCTGGCGAAGAGATTATAATTGATGGACGAACAAAAACTCTTTATGATCAACATGAATCGCTGGCGAATGGTGAAATTCACAATGGTTCCTCGATGCATAGCAGTGATGAGAGAAGTGAACGTGATAAttccTCCTTTTACGGCTCCAACCTTAATCGCAACGACGAGTACAAAAAGGACAAAACATCGGAGCAGGCAAAAAGTGAATTAAGTGATGATGAAAACGGCTTTGATATACGCTGTGAAGTGTGTGATAAAACATTTGTAGAACTAGAAggaCTTGACGATCATTTGGTGGGTGCCCATCACTTTCGTAAGGACGAATTTTTCTGTGAATTGTGCTCGCAGCGTTTTTGTCATCGGCCGCTGCTGTTAAAACATCGTGCTTTACAACATAACGAAATAAGGAAATATCCTTGTGAGAATTGTACGAAGGTATTTTGTGATCCCTCGAATTTACAACGACATATTCGTAACCACCACATTGGAGCCAGAAGTCACGCTTGCCCTGAGTGCGGTAAAACGTTTGCTACATCATCCGGTCTTAaacaacatacacacatacactctTCCGTTAAACCCTTTCAGTGTGAAGTTTGCTTCAAAGCCTACACGCAGTTCTCGAACTTGTGCAGGCACAGGCGTATGCATGCCGATTGCCGCATGCAGATAAAGTGCAGCAAGTGCGGTCAAAGTTTTAGCACAGTTACATCGTTGTCGAAGCataaacgattttgtgattcaACAAACGTACCACCGCCGGCGGGAGTAGGTCTACCGCCTAGTTTAACACATCAGCTGCATCATCAGCCTCAACAGCAAGTTCCCCCACAAGCTAGATCATCTGGAGTTAACGGTTCGATAGCGAACAATATGACTACACCACCAAATCCGTTTTTGTTTTGGCGTTCCACCTTTTTTCCGGCATTTCCCCCAGCCGCTGCTGCTTTTGGTTTGCAGGGCATGTTTCCTCAGACGCCGGCTGCTGCTCAAACACCTAATATTTCACATATGTTCCCCAATCCAAATGTTGATTTTAAACTGCAGCAAATGAGATGTCAGCCAGCGGTAAATCAATCTCTCAATCCCAACAGCAACAGTCTAACAAATTCTATAACTAACAATAATCTAGCGAAAGAGGAAGTAAAATTGACCACCCCCCAAGAGGCATTTGGCATATACTTCCCAAAATTAGAAGTTGAAGAGAAAGCTAAGCAAGatcttaaacataaaattaaattggaaaGAAGCACTAATGAACAACAGAACAAAAATCATAAACGTGATTTTACATTGGATGAAGAGTCAATTGAAACCAAAGAGAGAAGATTGAAACAAGAAATTAACAGAGAAGCggaaaagaaattacaacagGACaaggaagaaagaaaaattaaacaggaAAGCAGAcaacaaatagaaataaaaatgaaaaaggaagaagaagagGATGGCGCTTTAAGAATGAATGATGATGATAAGaaaTCCATAGATATTGTTTCCGTTTCACCAAATCATGAAACAGAAGCTAAAAGTCCATATACAGAGCTGCCTTTGGATTTGAGTGTGTCCAAGAAACGTAACAATACGGATACAAGTTCTAAGCAGCAAGAACATAAATTTGATGGCAAAAATGATACAAACTCCTcatctttaagtttaaaagttacaagtcCTGTTAACCAGGATGATTTAAGCAATGGTGATAGCTTGGAGCGACCAAGCAAAAAGCAGAGAATTTTTACATCTTCAATAAATAGTAGTCGTACACCTACTGCCTCACCAGGACCTACACCTTCACCCTCACCACCCTGCAATGTAAGTACTACGGCTGTGCATGCAAATAATACCGTTGCTTTGCCCACTTGTCCCCGGCCCATACATCCCATGCTGCTTGATGAAATCTATCGTACACATGCATTGGAAAGCACTTTTCAACGTCCGTTTCCTTTTTTAGGACTAATGGGCGAACGGCCGTCTTTGGAGGCCAATGCATTACGCGCAAGAGAAGATCAGCAGTTCGTAACAGAGCCCATGTTTCATGAGGCTTTAAGAGGACTTTCGTCGGGAGCTTTGCAAATATCTCAGGCGGGCAAGTTAAAAGATCGTTATTCttgcaagttttgtggcaaagtTTTTCCAAGGTCTGCCAATTTGACGCGGCACTTACGGACCCATACTGGCGAACAGCCCTATACCTGTAAATATTGTGATCGCGCCTTTAGTATATCCTCGAATCTGCAAAGACATGTGCGCAATATACACAACAAGGAAAGACCTTTCCGTTGTCATTTGTGTGATCGTTGTTTTGGCCAGCAAACCAATTTGGATAGACATTTGAAAAAACATGAATCGGATACCACGGGCCTGGGTTTGGCCATAAGTGACTCACCAAGTTCCAATGAGGCCGATCGTGAGGATTCATATTTCGATGAAATACGTAACTTCATGGATCGTGTTACCTACAATGAAGACCTTTACACACCTTCAAGTATAGGAAATGCCGAAAATGATACCGAATACAATGGCAGTGATAATGAGCTGTCAATTTCTAGAGCCTCATCGGCTGATCCTAATAATGAACAACATAAAGCATCAGAGGCTAATGAAGTTGTAGAAGATGATTAA
Protein Sequence: MSLPEFKCSTVEDYDFGGAFKQYPNNLASPDSTNTLRLATNTSDINSYPHSSHRLNGYSQSSSPSRSVLGVDSTTLVNALPHSPAHMEHLFSSKLHAERLLLELTTCLSEPNCDLKSNEGEAGVYAKQYLRRGTRFGPFALTESTEKSNAWDILPISHIRSLLEPSPEVKTLLKKIRTSSNSECEKEANFNNFYVAGCLWYESNRDIEAGEEIIIDGRTKTLYDQHESLANGEIHNGSSMHSSDERSERDNSSFYGSNLNRNDEYKKDKTSEQAKSELSDDENGFDIRCEVCDKTFVELEGLDDHLVGAHHFRKDEFFCELCSQRFCHRPLLLKHRALQHNEIRKYPCENCTKVFCDPSNLQRHIRNHHIGARSHACPECGKTFATSSGLKQHTHIHSSVKPFQCEVCFKAYTQFSNLCRHRRMHADCRMQIKCSKCGQSFSTVTSLSKHKRFCDSTNVPPPAGVGLPPSLTHQLHHQPQQQVPPQARSSGVNGSIANNMTTPPNPFLFWRSTFFPAFPPAAAAFGLQGMFPQTPAAAQTPNISHMFPNPNVDFKLQQMRCQPAVNQSLNPNSNSLTNSITNNNLAKEEVKLTTPQEAFGIYFPKLEVEEKAKQDLKHKIKLERSTNEQQNKNHKRDFTLDEESIETKERRLKQEINREAEKKLQQDKEERKIKQESRQQIEIKMKKEEEEDGALRMNDDDKKSIDIVSVSPNHETEAKSPYTELPLDLSVSKKRNNTDTSSKQQEHKFDGKNDTNSSSLSLKVTSPVNQDDLSNGDSLERPSKKQRIFTSSINSSRTPTASPGPTPSPSPPCNVSTTAVHANNTVALPTCPRPIHPMLLDEIYRTHALESTFQRPFPFLGLMGERPSLEANALRAREDQQFVTEPMFHEALRGLSSGALQISQAGKLKDRYSCKFCGKVFPRSANLTRHLRTHTGEQPYTCKYCDRAFSISSNLQRHVRNIHNKERPFRCHLCDRCFGQQTNLDRHLKKHESDTTGLGLAISDSPSSNEADREDSYFDEIRNFMDRVTYNEDLYTPSSIGNAENDTEYNGSDNELSISRASSADPNNEQHKASEANEVVEDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01162421;
90% Identity: -
80% Identity: -