Basic Information

Insect: Melanophora roralis
Gene Symbol: -
Assembly: GCA_963583895.1
Location: OY757190.1:38309423-38315636[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00065 0.07 14.6 0.2 2 23 261 283 260 283 0.96

2 18 0.028 3.1 9.5 2.4 1 23 316 338 316 338 0.97

3 18 8e-07 8.6e-05 23.8 3.2 1 23 345 367 345 367 0.99

4 18 0.00014 0.015 16.7 0.9 1 23 374 397 374 397 0.98

5 18 0.00011 0.012 17.1 0.2 3 23 403 424 402 424 0.94

6 18 0.12 14 7.4 0.3 1 21 433 453 433 456 0.87

7 18 2 2.1e+02 3.7 0.4 1 17 463 479 463 486 0.71

8 18 1e-05 0.0011 20.3 1.3 1 23 492 514 492 514 0.98

9 18 0.024 2.6 9.7 3.8 1 23 520 543 520 543 0.96

10 18 0.0063 0.69 11.5 2.5 2 21 753 772 752 775 0.93

11 18 2.8 3.1e+02 3.2 1.6 1 14 808 821 808 830 0.73

12 18 2.2e-05 0.0024 19.2 2.4 2 23 838 859 837 859 0.96

13 18 0.0001 0.011 17.1 0.4 1 23 866 889 866 889 0.97

14 18 0.002 0.22 13.1 0.4 2 23 894 916 893 916 0.91

15 18 0.021 2.2 9.9 0.1 1 23 924 947 924 947 0.97

16 18 0.89 97 4.7 0.7 1 23 954 977 954 977 0.83

17 18 2.3e-05 0.0025 19.2 2.0 1 23 983 1005 983 1005 0.96

18 18 0.008 0.87 11.2 2.7 1 23 1011 1034 1011 1034 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00065	0.07	14.6	0.2	2	23	261	283	260	283	0.96
2	18	0.028	3.1	9.5	2.4	1	23	316	338	316	338	0.97
3	18	8e-07	8.6e-05	23.8	3.2	1	23	345	367	345	367	0.99
4	18	0.00014	0.015	16.7	0.9	1	23	374	397	374	397	0.98
5	18	0.00011	0.012	17.1	0.2	3	23	403	424	402	424	0.94
6	18	0.12	14	7.4	0.3	1	21	433	453	433	456	0.87
7	18	2	2.1e+02	3.7	0.4	1	17	463	479	463	486	0.71
8	18	1e-05	0.0011	20.3	1.3	1	23	492	514	492	514	0.98
9	18	0.024	2.6	9.7	3.8	1	23	520	543	520	543	0.96
10	18	0.0063	0.69	11.5	2.5	2	21	753	772	752	775	0.93
11	18	2.8	3.1e+02	3.2	1.6	1	14	808	821	808	830	0.73
12	18	2.2e-05	0.0024	19.2	2.4	2	23	838	859	837	859	0.96
13	18	0.0001	0.011	17.1	0.4	1	23	866	889	866	889	0.97
14	18	0.002	0.22	13.1	0.4	2	23	894	916	893	916	0.91
15	18	0.021	2.2	9.9	0.1	1	23	924	947	924	947	0.97
16	18	0.89	97	4.7	0.7	1	23	954	977	954	977	0.83
17	18	2.3e-05	0.0025	19.2	2.0	1	23	983	1005	983	1005	0.96
18	18	0.008	0.87	11.2	2.7	1	23	1011	1034	1011	1034	0.97

Sequence Information

Coding Sequence: atgttttcaaaaagatGCAGCTTGTGTTGTAAATCATGTATTgaatttaaacctttaaaaaacttttggggtggatttaataatgtttacaaaataactgttaaatattttgatcCGCTGttgTTTACAGAAAATGTCACTACCTCTTCCAAAAATAGCAGAGTACTGTGCTCGGAATGTTGGCTACGCATTAAGCAGTTCCATGAATTTCACGAAACAGTAACTAAAGCAAGATTATCACTGGAACAAACCAATagtaaagaaaaacataaaaccgTTGTGACTTCAAATGATAAGCAAATTGACGTCGATCAACATGTTATTCAGAATTATTTAACGGACCATACAGAAACAGTTAAAGAAGTTGCCATTtccaatataaataaaactctaAAAGAAGATGTTCGGACTTCCAATGAGATGCATATCTCTGACAACATTAATAATGATGCCAAAGCTCAGGAAGATCCCCTAGGGGATAATCAGAGTTCTTTTGAGACTGATTCTGAAATAAGTAAAGATGATGGTAAAACTTCCAATACAGATATCATCGGAAACTATTCCAAGATCTCAAATGATGATGATATACCTTTAAGTAAACTTGCAGAAtctgagaaattaaaaaaaacgataactaaaagaaaaaaagaaaacaaacgtaaaaataaaattaacgaaaaaagaaaaaagccaAATGCTATAATAAAGCGAACCCAAAAGGATTACTTTGAGGAACAAAGACAAATGGACGAATTTATAAGGAAATGGAAATCTGAACTAGAATGTGATATTTGTGGCGAGACTTAtcctgtttttgaaaatttaaaggaaCATTTTAGGCGCAAACATAGTAATGTTAAGTGCTATATTAGATGTTGTAATCGAAAAATTGTTCAGCGCCATAGCATTATAGAGCACATCAATGTACATATTAATCCCGAAACTTACAAATGTAATATTTGTGGAAAACTCAGTACCACTAAAGGTACTCATAAACTTCATTTGGAGACCCATGAGGAGAACCGAGCAAAATATGAATGCAATGAGTGCCAAAAAacgtttaaacataaaaactcGTTAGAAAATCATATATTAACGCATTTTTCAAGCAGTAATGATTTTAAATGTACTCAATGCGATAGAGCATACGCAGTGGAAACTTTGCTTAAAAAGCACATTCAGAGGTTTCATGGTCGCACTAAAATTTGCGATACATGCGGAAAAACACTGCGCGACAGTGGAGCACTAAGAAAACATATTAACGCTAATCATTTAGAGCATCAAACACGAATTAAGTACCCCTGTGATGTATGTGGTCTCGAATTAGCATCTGCTTCTAATTTAAAATGCCATAAGGAAGCTTATCATCACGATGGCTCCACAGTTTACGTTTGCAGTATATGTAATAAAGTCAAAGCTAGTGCCAGAGCTTTAATGTTTCATAAGAAATATTCGCACATTTATACAGCGAAACACAAATGTACTTATTGCGATAAAGCATTTAAACGGCCACAACCTTTAAAAGAACACGTTGCAACTCATACAGGTGAAGCTCTATATTTTTGTGACTTGTGtccgaaaacatttaaaatgcaaaaaaaacgcAGCGCCCATCGTAAAAAATTTCATCCAGATGAATGGCTAAAAGATAAAAagTTGTTTACAGAAAATGTCAGAACCTCCTTCGAAAATAGCAGCGTGCTATGCTTGCATTGTTGGGTACGTATAAAGGACTTCGATGTATTTCACGAAACAGTATTAAAAGCAAAGCTGACACTGGAAGAATCTACTTGTGAAAACAGTGATGAAgcaattattatttctaaatcTGTCGGCATCGTTCAACATGATAATCAGAACTTTTTATTGCAAGATTCTGAAAcggataaaaaaaatagcataCCTAATAAAAATGAATCTTTAAGTAAAGGTGCTCCAAGTAATGAAATGGACAACTTGGACAAGATTGTTGAACATAAATATGATGTAGAACCTTCAGTAGATATTCCCAGTTCTGATTACGAAATAAACAATGATGAGGTTGAACACTCCAATGCAGATCCAATCGCAAACGATTCGGAGGGCTTAAGTGATTTTGATGATATACCTTTAAGTAAACTAGCAGAAGTTAAAAAGTCTATGAAACcgataagcaaaaaacaaagacaaaatTGCAAAGCAAGACTAACTGGAAGAGAATACTTcgaggatattaaaaaaaaggacgaCTTTATAAACAAATGGAAATCTGAATTAGAATGCGATATTTGCGGTgaaaattttccatattttcaaaatttaaggaAACATTTTAGGTGCAAACACAGCAATGTTTTGTGTTATATAAAATGTTGTAACCGTAAAATTTTTCAGCGTCAAGAAATTATAGAGCATATCGATATACATATCAATCCCGAGACCtataaatgtaatatttgtgAAAAGCTTAGTACTACTAAACGTATTCATGAGCTTCATTTGAAAActcacaataaaaatataaaggaatTAATGTGTAATGAGTGTGGAAAGTCTTTTCGACATAAATACACATTAGACATTCATACATTAAGGCATGTTACAGGCAGcaaagattttaaatgtaatcaaTGCGATAGAGCATACGCTGTGGAGACATTGctgaaaaaacacattcaagTGTTTCATAATCGTACTAAAGTTTGCGATACTTGTGGAAAAACACTTCGCGGAAATGGAGcactaaaaaaacatatatattttaatcattcaaaagttgaaaaaatcaaataccCATGTGAAGTATGTGGTCTCGAACTAGCTTCAACTTACGGTTTAAGAGAACATAAGAAATCTTATCATAGCGATGGTTCTACAGTTTACGTTTGCAGTATATGTAACAAGGTTAAAACTAGTGAAAGAGCCTTAAAGTTTCACAGACAATATGCGCACATTAATCCTGCAAAACACATATGCACTCATTGCGGTAAAGCATTTAAACGGTCACTAGCTCTTAAAGAGCATGTAGCAACTCATACAGGAGAAGCACTTTACATTTGTGACTTGTGcccgaaaacatttaaaatgcaaaaaaaacgcAGCGCCCATCGTAAAAAATTTCACCCAGATGAATGgcgaaaagataaaaaagtaattttgaaaaaaaatccaatcgATATGAATCGCGTTACAAATAAAGTTGTAGTTTAA
Protein Sequence: MFSKRCSLCCKSCIEFKPLKNFWGGFNNVYKITVKYFDPLLFTENVTTSSKNSRVLCSECWLRIKQFHEFHETVTKARLSLEQTNSKEKHKTVVTSNDKQIDVDQHVIQNYLTDHTETVKEVAISNINKTLKEDVRTSNEMHISDNINNDAKAQEDPLGDNQSSFETDSEISKDDGKTSNTDIIGNYSKISNDDDIPLSKLAESEKLKKTITKRKKENKRKNKINEKRKKPNAIIKRTQKDYFEEQRQMDEFIRKWKSELECDICGETYPVFENLKEHFRRKHSNVKCYIRCCNRKIVQRHSIIEHINVHINPETYKCNICGKLSTTKGTHKLHLETHEENRAKYECNECQKTFKHKNSLENHILTHFSSSNDFKCTQCDRAYAVETLLKKHIQRFHGRTKICDTCGKTLRDSGALRKHINANHLEHQTRIKYPCDVCGLELASASNLKCHKEAYHHDGSTVYVCSICNKVKASARALMFHKKYSHIYTAKHKCTYCDKAFKRPQPLKEHVATHTGEALYFCDLCPKTFKMQKKRSAHRKKFHPDEWLKDKKLFTENVRTSFENSSVLCLHCWVRIKDFDVFHETVLKAKLTLEESTCENSDEAIIISKSVGIVQHDNQNFLLQDSETDKKNSIPNKNESLSKGAPSNEMDNLDKIVEHKYDVEPSVDIPSSDYEINNDEVEHSNADPIANDSEGLSDFDDIPLSKLAEVKKSMKPISKKQRQNCKARLTGREYFEDIKKKDDFINKWKSELECDICGENFPYFQNLRKHFRCKHSNVLCYIKCCNRKIFQRQEIIEHIDIHINPETYKCNICEKLSTTKRIHELHLKTHNKNIKELMCNECGKSFRHKYTLDIHTLRHVTGSKDFKCNQCDRAYAVETLLKKHIQVFHNRTKVCDTCGKTLRGNGALKKHIYFNHSKVEKIKYPCEVCGLELASTYGLREHKKSYHSDGSTVYVCSICNKVKTSERALKFHRQYAHINPAKHICTHCGKAFKRSLALKEHVATHTGEALYICDLCPKTFKMQKKRSAHRKKFHPDEWRKDKKVILKKNPIDMNRVTNKVVV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -