Basic Information

Insect: Melanophora roralis
Gene Symbol: -
Assembly: GCA_963583895.1
Location: OY757190.1:82429019-82439951[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.2 1.3e+02 4.3 3.0 1 23 132 155 132 155 0.92

2 16 0.00092 0.1 14.1 1.1 2 23 161 183 160 183 0.95

3 16 2.3e-05 0.0025 19.2 3.1 1 23 192 215 192 215 0.96

4 16 3.1e-06 0.00033 21.9 5.5 2 23 456 477 456 477 0.98

5 16 1.4e-05 0.0015 19.9 4.3 1 23 483 506 483 506 0.96

6 16 0.00055 0.06 14.8 2.6 1 23 511 534 511 534 0.98

7 16 6.2e-05 0.0067 17.8 1.2 1 23 545 567 545 567 0.95

8 16 0.0015 0.16 13.5 2.6 1 23 572 595 572 595 0.96

9 16 3.3e-05 0.0036 18.7 0.8 1 23 601 623 601 623 0.96

10 16 0.00015 0.016 16.6 1.9 1 23 629 651 629 651 0.98

11 16 7.7e-07 8.4e-05 23.8 1.6 3 23 659 679 658 679 0.99

12 16 5.4e-07 5.9e-05 24.3 0.3 1 23 685 707 685 707 0.99

13 16 0.001 0.11 14.0 0.2 1 23 712 735 712 735 0.98

14 16 0.0017 0.18 13.3 1.7 1 23 909 931 909 931 0.98

15 16 2.7e-05 0.0029 19.0 1.2 3 23 939 960 937 960 0.94

16 16 0.00061 0.066 14.7 3.0 1 23 965 987 965 987 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.2	1.3e+02	4.3	3.0	1	23	132	155	132	155	0.92
2	16	0.00092	0.1	14.1	1.1	2	23	161	183	160	183	0.95
3	16	2.3e-05	0.0025	19.2	3.1	1	23	192	215	192	215	0.96
4	16	3.1e-06	0.00033	21.9	5.5	2	23	456	477	456	477	0.98
5	16	1.4e-05	0.0015	19.9	4.3	1	23	483	506	483	506	0.96
6	16	0.00055	0.06	14.8	2.6	1	23	511	534	511	534	0.98
7	16	6.2e-05	0.0067	17.8	1.2	1	23	545	567	545	567	0.95
8	16	0.0015	0.16	13.5	2.6	1	23	572	595	572	595	0.96
9	16	3.3e-05	0.0036	18.7	0.8	1	23	601	623	601	623	0.96
10	16	0.00015	0.016	16.6	1.9	1	23	629	651	629	651	0.98
11	16	7.7e-07	8.4e-05	23.8	1.6	3	23	659	679	658	679	0.99
12	16	5.4e-07	5.9e-05	24.3	0.3	1	23	685	707	685	707	0.99
13	16	0.001	0.11	14.0	0.2	1	23	712	735	712	735	0.98
14	16	0.0017	0.18	13.3	1.7	1	23	909	931	909	931	0.98
15	16	2.7e-05	0.0029	19.0	1.2	3	23	939	960	937	960	0.94
16	16	0.00061	0.066	14.7	3.0	1	23	965	987	965	987	0.99

Sequence Information

Coding Sequence: ATGGATGAATCCGCAGATTTATCAAAGTACAATAAAACTGAAATTTGTCGCATATGTTTGCAGGCTGATGATAATCTATTTCCGATATTTAATGAAGTATTATTTGAGAACAAAATGGCCACAATGGCTGAAATTATTACAGAGTGTACCATGTACCCAGTGACACCCAATGATCAGCTTCCAGCGCAAATATGCAATGCATGCATAAAAGCTGCTCGTAATGCACaccaatttaaaaagcaaacagaAAAGGCCTACCGCCACCTAAAGTCGTTATATGACATAAACTGGCTTCCCAAAGAGGAGGAGGGTGATAGTAGAATTCCTGTTAAAGATATGGGAATGAGTGGCACCTATGAAGACAAGTATACACAAACTGAAAAAGGTTCTTTGTTTCAATGTGAGTGTTGCACAGAAAAGTTTTTCTCCGATTCTAAATTAAAACAGCATCGTGCTGAAGCCCATTCAGATGATATCAAAAAGTGTCGCGTTTGTGGTGATACCTTTACCCATCCGGGGCAGTTAAGAGTCCATTTATCCATCAAACATCCAAATGAAGGCATAACTTGTGATTTTAAATGTACCATGTGCTCAAAATTATTTGCACGCAGAGACCAtttaaaaaggcatttaaaaGGTATACATAAGATCAAGAGCGAGGCAGCACTTAGAGCTAAAATGGGCCTGGATGAACTGGAAAACGCTGTCACATTATCTCCTAGGAAATACCGCTGTAATTGGTCGGAATACCAGGAAAAAATTGATGACTATGAAGATAATGAAAGCGCCGCCGCCATAAATCCTTTCTCTAGCGAAGATGAAGGTCTTGATATTCATAAATTTGTTAACATTGAAGAAGATGTTAAACAGTTTGTTGAAACTATATCGCAACCTGAATTATCAATTAAAGTTGAAAATCCTAATTGCATCGACATTTTAGAAGACAATAACAATCAAAAACTTTCTAAATCCACAAGTAGTTTATGTGATGAGACTAAATCCCTGTTAACGGAGTTAAAAgcagaaatatttgaaaattatttagaaaataagagCAATAACAGTGAAGATGAAGAAGCTGGAGAGTTGAACAGttcatttaatgaaaattatagCTTCAGTGAGGGTACAACAGACAGCGATGAACTTGTAAGCGAAGGTAATGAAGCTAATGATAAAAAGAGCTTTAAACGGCgtaaaaagtttgggaaatcgCACATGGTTGCTTTTCTACAACATGAACATACTACTGATCATAAAGAAGAAGACCCTACAAGTACCAACGCCagtattaaaaagaagaaaatgaatGTTACTACAAAACTACCCAGGCGGCGTTATGGTTCTTCATCAAGCACAGACAATCGCTGTAAAGAATGTAATCGCACTTTTACCCGCTACAATCATTTACAGCGCCATATGCTCACCCATAGCGATGTTAAGCCgcatgtttgtagtttttgCAGCAAAGGATTTTCACGTTCAGatcatttacaaaaacatatacaGAGTTTACATTGTGAAAAGAAGTTCAAATGTGATCAGTGTTCGTCGGAATATGGCCGCAAAGATCACTTGCAACGGCATATAGAAACGCGCCATAATAAGGATCCCACAGCCCCAAAGCCACAATTTGACTGTGATATGTGCGAAAAAAAGTTTACCACCAAAGCCTATTTGGCCAAACACAAACTATTGCATACTGATCGCCTGTATGCCTGCAAGCATTGTTCAGAAACTTTTCCCGAAAAGGAACAGATGAAGGAACACCAAAAGAATAAACACTCTCAGCCCCGCAACTTTCTGTGTAATATTTGCGGAGATTCATTTCAACGCAATGAATATCTTAAAATACATATGCGTCGTCATACGGGCGAAAAGCCCTACAAATGTCGTTTTTGCGAAAAAGGTTTTCCACGCAGCACAGATTTGAAAATGCACGAaagATATCACATTGGCCATAAaccaaatttatgcaatttatgTGGCAAAGGTTTTCATCGCCCCTATAATCTTACCATACACATGCGCACTCATACGGGTGAGAAACCCTATAAGTGTAATCAATGCCCTCAAGCATTTGCTCAAAGTAATGACTTGAAGGCCCATATAAGACGTCATACAGGGGAGCGTTTTCGTTGCGATATATGCAGTGCCGCATTTTTGCAACGTTATGGTTTAAATGCCCATTTAAGAACAATGCATGGTATTATAGTTACTTCATTTACCGGACGTTTGCGTAAGACTGAACAACCTTTAAATAATGCAGATGCAGTTGAACAACAGCCTACAGATACATCACAATCGCATCAAATAACAAACGCACAAGAGCAGCCTGAATCCTCTCTACTCTTACCTTCCTTAGAAAACAATGTAACAACACCTCCACCTTTGTATTTAGGTCATCATTTTATAAACCCTACTAACCCAACCTCACCAGCAACGCCTCTTAATATATCCTCGGTTAGTGTAACGTTGCCTCTGCCGTTAGCACttgAACCAAGTGACTTTAATGATGATTACAGCCATTATGATATAAATGAACCTGAACCAAAACCAGAAATTATAAATATGGAACAAGATGACGACGAAAACGAATATATGGCAAATGACAATGATTTCATTGTTCAAAAGCTTTTGAGACCAAAAATCGTATTAAAAACTAGTACATCTCCTATAAACAATCTTGTTCAAATATTTAAGCGAAATCCTTTAACGAAAATGTATACCTGTGTCGAATGTCTATTGGAATTTAAATTACAACACACCTTAATACGTCATATGTTGAAACACAAAACGTATAGACCATTAGACTGTAATATATGTTCAAAGACTTTAAAAAGTAGAGATaatctaaaaaaacatttacgaGATATGCACTTTGAAAAACCATATAAATGCCGTCTATGCGCTAAGAAGTTAACCACGCAAACGCAGTTATTAAGACACACTAGGAGACACTACAAGAAAATGTcttattaa
Protein Sequence: MDESADLSKYNKTEICRICLQADDNLFPIFNEVLFENKMATMAEIITECTMYPVTPNDQLPAQICNACIKAARNAHQFKKQTEKAYRHLKSLYDINWLPKEEEGDSRIPVKDMGMSGTYEDKYTQTEKGSLFQCECCTEKFFSDSKLKQHRAEAHSDDIKKCRVCGDTFTHPGQLRVHLSIKHPNEGITCDFKCTMCSKLFARRDHLKRHLKGIHKIKSEAALRAKMGLDELENAVTLSPRKYRCNWSEYQEKIDDYEDNESAAAINPFSSEDEGLDIHKFVNIEEDVKQFVETISQPELSIKVENPNCIDILEDNNNQKLSKSTSSLCDETKSLLTELKAEIFENYLENKSNNSEDEEAGELNSSFNENYSFSEGTTDSDELVSEGNEANDKKSFKRRKKFGKSHMVAFLQHEHTTDHKEEDPTSTNASIKKKKMNVTTKLPRRRYGSSSSTDNRCKECNRTFTRYNHLQRHMLTHSDVKPHVCSFCSKGFSRSDHLQKHIQSLHCEKKFKCDQCSSEYGRKDHLQRHIETRHNKDPTAPKPQFDCDMCEKKFTTKAYLAKHKLLHTDRLYACKHCSETFPEKEQMKEHQKNKHSQPRNFLCNICGDSFQRNEYLKIHMRRHTGEKPYKCRFCEKGFPRSTDLKMHERYHIGHKPNLCNLCGKGFHRPYNLTIHMRTHTGEKPYKCNQCPQAFAQSNDLKAHIRRHTGERFRCDICSAAFLQRYGLNAHLRTMHGIIVTSFTGRLRKTEQPLNNADAVEQQPTDTSQSHQITNAQEQPESSLLLPSLENNVTTPPPLYLGHHFINPTNPTSPATPLNISSVSVTLPLPLALEPSDFNDDYSHYDINEPEPKPEIINMEQDDDENEYMANDNDFIVQKLLRPKIVLKTSTSPINNLVQIFKRNPLTKMYTCVECLLEFKLQHTLIRHMLKHKTYRPLDCNICSKTLKSRDNLKKHLRDMHFEKPYKCRLCAKKLTTQTQLLRHTRRHYKKMSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -