Mror017391.1
Basic Information
- Insect
- Melanophora roralis
- Gene Symbol
- bab2
- Assembly
- GCA_963583895.1
- Location
- OY757189.1:48293117-48294955[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.4e-06 0.0018 18.9 0.0 12 39 397 423 392 427 0.88 2 4 8e-14 1.1e-10 42.1 0.0 5 44 443 482 440 483 0.92 3 4 0.033 44 4.9 0.0 27 37 512 522 508 528 0.89 4 4 6.9e-15 9.2e-12 45.5 0.0 4 41 551 588 551 590 0.92
Sequence Information
- Coding Sequence
- atgaaCAATTTAAAGTGGATGGGCCATTCGGCCACAATACTtgatatacataaaaatttacgAGACGATATTAAGAGTTGTGATGTTACTCTGGTGGCTAAGGGACATAGTGTTAAAGCCCATCGTTTTGTGTTATCCTCGTGCAGTGATTTGTTGCGTTGTCTACTAAAAGATGTGCCCGTTGGCCAGGAGTGTTGTGTAATATTACCTGACATGAAGGGTCATTTACTGGAAAATGTTTTGGCCTTTGTTTACCTGGGCGAGTGTTCGTTGTCCTCCGCCAACTTATCTGAGTTCTTAGAAGCCATCAATGTCATGGGCATAAAGAGTGCTATTAGTTTTGAGTGTAATACAAATGCTATGCAATCAGCTCAAAGTAGCGCCTCCTCCAGCAGTATAACACCAGATAATAGCGCAACAATTTTACCTGCAAGCACAACCATAGCCAGCCAGCAAGTGACTATAGTTGGTGCTCCGGATGATGAGTTGCATCAGACTGAGATAATTGAAGCGCACAGTGTAATACCTACTACTCCAGCAAATATCATAAGCAATACAGGTACTACAACAAGAGAACTAGATTTTTTAGATGTGTACCATGAACCTCAACATAAAATAACTTATTCGATCGAGCATGTACCAGGATCTGCAGCGGGCAACGAGTTCATATTAACCGAAAACTCTGGTACTTTCACACTTACCCATAGTGGCAAATTGGAACCAACTGCATCGCCGGCCGAATCCTCTACAATGGAAGTAACTGAAGATGACGGTTGCGAGTCGCAAATAATAGAGGAATACAGTAGTGGCGAAGAACCTTTATTGCATATGGGTGAGACTGCTCAAGAGCAACATACTGTTACAGTAGTACATACAGCAACAACACAGCAAGAGCAGCAACAAATCACACCCATTGCTACTACAACAACACCCACAGCAATATTACAGGCAAAATCGAAAGTTAAAGCTCTTAAGGTAAAACACCATAATCCTGCCCCGCAACATATAAAAGATGATGCGACAGGCAGCGAAGATCCAATATCGGTACTAAAAACATCAAATGAAAGTTATAACCTTCTTAAATATGCTAGCATAATGCCGGCAAGTAATACTAGCCAAGACGAGTCTACTAACTATTCCCTGAACAATTCGAATTCTTCAGGAGTCGATTTAGCCTATCAGGTTATGGTTAGTGCAGGCATGTCTTTGCCGAAAGCTgccaataaatttaatgtatcaAAAGCGGAACTATGGCGTCGAGTGCGTAGTACTGGTGTCGAACAGCTTAACAAACCCGATAAATTGGATCCGGATAAAGTTGATGTTATAGAACTAGCCAGCAGGGCAGTAATTAACGAGGGCCTATCATTACAGAAGGCTGCCGTACGTTATGATATTTCGAAAACGGTGTTATGGCGCAGGGTACGCAAACATCCACAGTATATGAAGACAGCACGAGAGAATCCTATTATCACAAAGGCTTACGAGCGTTTAAAGTCTGGTGAATCGCTTAAGAGCATATCACAAGATCTGGATATACCTATGTCAACTTTACATCGCCATAAAGTTCGACTTTCGCAATCAGGTCAATTGCCTGATTTTGTTACGTGTAAAAAACGTGATAGCATGTCTAAAGATGATCTGAAAATAAAACTTGCGAAGGCAGTTCATGCTTGCGTGCATGAGGGTATGTCCCAAAACCATGCAGctaatttgtttcaaatttcaaaaagtacgcTATGGCGTCATCTGCAGAAACGTGTAGCCGAAGCTGAGGCAGCCGAGACAGATTCAATGGATGATAAGGATGAAATTAAGCATGAAGTTATACtttcataa
- Protein Sequence
- MNNLKWMGHSATILDIHKNLRDDIKSCDVTLVAKGHSVKAHRFVLSSCSDLLRCLLKDVPVGQECCVILPDMKGHLLENVLAFVYLGECSLSSANLSEFLEAINVMGIKSAISFECNTNAMQSAQSSASSSSITPDNSATILPASTTIASQQVTIVGAPDDELHQTEIIEAHSVIPTTPANIISNTGTTTRELDFLDVYHEPQHKITYSIEHVPGSAAGNEFILTENSGTFTLTHSGKLEPTASPAESSTMEVTEDDGCESQIIEEYSSGEEPLLHMGETAQEQHTVTVVHTATTQQEQQQITPIATTTTPTAILQAKSKVKALKVKHHNPAPQHIKDDATGSEDPISVLKTSNESYNLLKYASIMPASNTSQDESTNYSLNNSNSSGVDLAYQVMVSAGMSLPKAANKFNVSKAELWRRVRSTGVEQLNKPDKLDPDKVDVIELASRAVINEGLSLQKAAVRYDISKTVLWRRVRKHPQYMKTARENPIITKAYERLKSGESLKSISQDLDIPMSTLHRHKVRLSQSGQLPDFVTCKKRDSMSKDDLKIKLAKAVHACVHEGMSQNHAANLFQISKSTLWRHLQKRVAEAEAAETDSMDDKDEIKHEVILS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00975737;
- 90% Identity
- iTF_00975737;
- 80% Identity
- iTF_00975737;