Mqua012728.1
Basic Information
- Insect
- Melangyna quadrimaculata
- Gene Symbol
- SMARCC2
- Assembly
- GCA_949320155.1
- Location
- OX439483.1:202983624-202986337[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.1e-15 3.3e-11 45.2 0.1 3 44 171 212 169 214 0.95
Sequence Information
- Coding Sequence
- ATGCCAACTTACAGCTTAAGTCTCAACATTAACAAAACGGTCGGACAACGTTTTTACGGTAGCAATGGatTAAATCCAACCGAATATTTGACCAGCACTGCATGTAGACGTAATCTAGCCGGTGACGTTTGTGCTATAATGCGTGTACACGCATTCCTTGAACAATGGGGTTTGATAAATTATCAAATAGATGCAGAACTACGTCCTACACCCATGGGACCACCGCCAACATCGCATTTCCACATTTTAAGTGATACACCATCTGGCTTACAATCGCTGAACCCACAAAAGACACCACAGCCATCGGCTGCGAAAGCCTTACttgattttgataagaaaaaagaaGGAGCCAAGGAAGGTGAAGGTGAAAAACCAACACTTCTCACAGCCGGTGCTGCCGTCAAGGTTGAGACGATCGAAAATGGTGGTGGACAATTTGGACTAAAATTAGATCAGTATACAAAGAAACCGGCTGCTATGAAAAATCGCACTGCAGCTAATATGTCTCGTGAATGGACAGATCAAGAAACTCTTCTACTGCTTGAAGGATTAGAGATGTATAAAGATGACTGGAACAAAGTGTGCGAGCATGTTGGCACACGTACCCAAGATGAATGTATATTGCATTTTCTTCGATTACCCATTGAAGATCCTTACTTGGAGGATGATGGTGGCTTTTTGGGTCCACTTGGCTATCAACCCATTCCGTTTAGCAAGTCTGGAAATCCAATTATGTCTACAGTAGCATTTTTAGCTTCAGTTGTTGATCCAAGGGTTGCTGCTGCAGCAGCCAAGGCTGCTATGGAAGAATTTGCTGCTATTAAGGATGAAGTTCCATCGTCCATAATGGATACTCATTACAAAAATGTGGAGAAGCTAAACTCCACTGGAAAGTTCGATCCCTATGCTGGTCTATCTAACAGCGGTATAGCCGGAACGGGAACTGACAAAGAAGATGAAGATCCTTCAAAGCCACCAGTTGCAATGATTATGCCACCAACTACGTCTCAGGACGAAGAAATGAAAGACCTTACTAAGAAGGAGGTGACAGCTGATTCTAGCAATCCTGAATCCCCCAAATCCGAATCTTCCTCCCAACCTTCTGCTGGAGTTGAGCCtaataaatcaaaatcaaaccCCACCGTTTCAACAGGTATtgatgaaaaagaaattaaaactgaaGAATCTTCAATGGAATCAACATCGGGTAGCACGGAGGCAACAaatggttccaaagaaaatggCGATGGTAGTCGCAAGCAAATTTTCAACGAAGCCAATCTTCAGACTGCTGCTGCAGCAGCTCTTGCTTCCGCTGCTGTTAAGGCTAAACATCTAGCTGCACTCGAAGAACGTAAAATAAAATCTCTTGTTGCTTTGTTGGTAGAGACACAAATGAAGAAATTGGAAATTAAATTAAGGCACTTTGAAGAGCTTGAGACAACTATGGAAAAGGAACGTGAAGGCCTAGAGTATCAACGACAGCAACTCATAACTGAGCGTCAACAATTCCATTTGGAACAATTAAAAGCAGCCGAATTCCGCGCAAGACAACAAGCTCATCATCGCCTGCAACAAGAGCAGCAGTGGCAGGGTAATGCAGCCCAAGCTCCACCCGGTGCTGCTGGGGCAACACCAATGCCGGGGACAACTGGGCCAACCGCACCATCATCAACAGGTGTAACAGCACCTAGCGCATCGCAACCTACAGCCCAACCCTCTGGATCTGTTCCGCCACAGGCCCCCAGTGTATTACAGACTCCATCTGTGCTAGAACCACATTCCCAACAACCCCCTGTGCCACAGGTTGGTCCCGTAGAGCCCAATATGCCCCCACAGGGACCTCCGCCGGCAATTACAGGTGCTCTTCAACAAACTCCACCACAACCGATGCAGCCCATGCAGCCAATGCAGCCTACACAGCCTCCTTCAGTTGTTCCTCCAAGTATCCTTCCGGTTCCTCCTTCACCATCGTCTCAGACCTAG
- Protein Sequence
- MPTYSLSLNINKTVGQRFYGSNGLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDAELRPTPMGPPPTSHFHILSDTPSGLQSLNPQKTPQPSAAKALLDFDKKKEGAKEGEGEKPTLLTAGAAVKVETIENGGGQFGLKLDQYTKKPAAMKNRTAANMSREWTDQETLLLLEGLEMYKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDDGGFLGPLGYQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPSSIMDTHYKNVEKLNSTGKFDPYAGLSNSGIAGTGTDKEDEDPSKPPVAMIMPPTTSQDEEMKDLTKKEVTADSSNPESPKSESSSQPSAGVEPNKSKSNPTVSTGIDEKEIKTEESSMESTSGSTEATNGSKENGDGSRKQIFNEANLQTAAAAALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEKEREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQQEQQWQGNAAQAPPGAAGATPMPGTTGPTAPSSTGVTAPSASQPTAQPSGSVPPQAPSVLQTPSVLEPHSQQPPVPQVGPVEPNMPPQGPPPAITGALQQTPPQPMQPMQPMQPTQPPSVVPPSILPVPPSPSSQT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -