Mqua019670.1
Basic Information
- Insect
- Melangyna quadrimaculata
- Gene Symbol
- -
- Assembly
- GCA_949320155.1
- Location
- OX439483.1:264177832-264179364[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.7e-09 5.6e-06 28.1 0.0 3 40 18 55 17 60 0.92
Sequence Information
- Coding Sequence
- ATGGAAAGTtccgaacaaaaaataaaacgcgAATTCCACAAGTACCCCAAAGAGGCACTTAATAACGCATTAGAAAAAATTAGGAAGCACAATTGGCCGATCAGAAAAGCAAGTAGGGAATACGGGGTGCCTCGAGGTACACTACAAGATCGTATCCATGGTAGAGTTGTACAGAAGCCAAGAAGAATGGGACCGGAAACTGTCCTTAGTTTAGCCGAAGAACAGAAGCTAGTTAAGTGGCTCGTTGACCTTGCCAAGTGTGGATTTCCACAGAAGCCTACAGACCTCTTGAATATGGTCCAAAAAATCCTTCGTGAGGACAAACGTAGGACTCCATTCAATGATAGCCTACCCGGGAAAACGTGGTACTACGCCTTCTTAAGACGTCATAATGAACTGTCCCTCAGAACAGCAGAGGGACTCTCAAAAGGGCGAGCGATCGTGACGGAGGAGTCCATTAGGAAGTGGTTCCGTGATCTTAAAGAGTATTTAGAAGAGATTGCTGCAGCCGATATTTTAGAAGACCACTCAAGAATCTTTAATGGGGATGAAACATCATTCAGCCTATCTCCAAAAACAGGAGTCGTTTTAGCGCCAAGAGGTTGGAAAAATCTTTATACCGTACAACAAGGAAACGAAAAAGAGACGATCACGGTACTTTTTCTCTTCAGTGCCGATGGCCAAATGCTACCACCGTTGGTTGTGTTTCCCTATGTGCGCCCTCCTCAAGCTGTTGTAAAAAGTATGCCGGATAAATGGGTCTTAGGCAGATCTGAAAGTGGGTGGATGCGATCCGAGACGTTTTTTGAATATGTGGCCAATAGTTTCAACGAATGGATTACGGAAAGTAATATAAAACGCCCAGTAATGCTGTTAGTCGATGGCCACAAGTCCCACCTTTCAATGGAATTAAGCGACTTCTGCCGTGATAACGGAATCATCTTGTACGCTCTTTTACCCAATACAACCCATATTACACAGCCCGCTGATGTGGGCGCATTTAAAGGCCTGAAAactgattacaaaaaaacagTTCACAAATGGCAATCTATTCCCGAAAATAGAAACAAAGCTGTTACGAAGACGAACTTTTGTAAAGTGTTGGAAATGGTATTGGATAGTGCAGACAGGACAGAAATCATCAAACATTCCTTTCGAAAATGTGGGTTGTATCCTTTCAACGCGGATGCTGTCGAATATTCCAAATGCGTACAAAACCAGATTGAAAACCTCTGCCCGGAATCAGATATTCTTACCGTTACAAGCTTCAGCTTTTCAGAAACTAAGAAAGTACTATCCTTGGCAAAGGAAGAAATTGCTAGACAAAATATTGATTTCAGTGCACTTTTGGAAATAATTGAAAAGCTGGAGCAGAGTCACCTGAGCCAAACCGGGCCAAATGAAACCCTAACCGGCACCTATGTCATTGATGAAACAGGTGAACTGCAAAAACTTAGTTCAGCAGTAACAGATTCCGCACCATCCGCAGCTTTTACAGCAGGCAAAAGAAGTCTTAGCTACAACCATTGGTAA
- Protein Sequence
- MESSEQKIKREFHKYPKEALNNALEKIRKHNWPIRKASREYGVPRGTLQDRIHGRVVQKPRRMGPETVLSLAEEQKLVKWLVDLAKCGFPQKPTDLLNMVQKILREDKRRTPFNDSLPGKTWYYAFLRRHNELSLRTAEGLSKGRAIVTEESIRKWFRDLKEYLEEIAAADILEDHSRIFNGDETSFSLSPKTGVVLAPRGWKNLYTVQQGNEKETITVLFLFSADGQMLPPLVVFPYVRPPQAVVKSMPDKWVLGRSESGWMRSETFFEYVANSFNEWITESNIKRPVMLLVDGHKSHLSMELSDFCRDNGIILYALLPNTTHITQPADVGAFKGLKTDYKKTVHKWQSIPENRNKAVTKTNFCKVLEMVLDSADRTEIIKHSFRKCGLYPFNADAVEYSKCVQNQIENLCPESDILTVTSFSFSETKKVLSLAKEEIARQNIDFSALLEIIEKLEQSHLSQTGPNETLTGTYVIDETGELQKLSSAVTDSAPSAAFTAGKRSLSYNHW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00974587; iTF_00974588; iTF_00974589; iTF_00974590; iTF_00974598;
- 90% Identity
- iTF_00974588;
- 80% Identity
- -