Mqua019666.1
Basic Information
- Insect
- Melangyna quadrimaculata
- Gene Symbol
- -
- Assembly
- GCA_949320155.1
- Location
- OX439483.1:264153810-264154685[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2e-09 3e-06 28.9 0.0 3 40 18 55 17 59 0.92
Sequence Information
- Coding Sequence
- ATGGAAAGTtccgaacaaaaaataaaacgcgAATTCCACAAGTACCCCAAAGAGGCACTTAATAACGCATTAGAAAAAATTAGGAAGCACAATTGGCCGATCAGAAAAGCAAGTAGGGAATACGGGGTGCCTCGAGGTACACTACAAGATCGTATCCATGGTAGAGTTGTAGAGAAGCCAAGAAGAATGGGACCGGAAACTGTCCTTAGTTTAGCCGAAGAACAGAAGCTAGTTAAGTGGCTCGTTGACCTTGCCAAGTGTGGATTTCCACAGAAGCCTACAGACCTCTTGAATATGGTCCAAAAAATTCTTCGTGAGGACAAACGTAGGACTCCATTCAAAGATAGCCTACCCGGGAAAACGTGGTACTACGCCTTCTTAAGACGTCATAATGAACTGTCCCTCAGAACAGCAGAGGGACTCTCAAAAGGGCGAGCGATCGTGACGGAGGAGTCCATTAGGAAGTGGTTCCGTGATCTTAAAGAGTATTTAGAAGAGATTGCTGCAGCCGATATTTTAGAAGACCACTCAAGAATCTTTAATGGGGATGAAACATCATTCAGCCTATCTCCAAAAACAGGAGTCGTTTTAGCGCCAAGAGGTTGGAAAAATCTTTATACCGTACAACAAGGAAACGAAAAAGAGACGATCACGGTACTTTTTCTCTTCAGTGCCGATGGCCAAATGCTACCACCGTTGGTTGTGTTTCCCTATGTGCGCCCTCCTCAAGCTGTTGTAAAAAGTATGCCGGATAAATGGGTCTTAGGCAGATCTGAAAGTGGGTGGATGCGATCCGAGACGTTTTTTGAATATGTGGCCAATAGTTTCAACGAATGGATTACGGAAAGTAATATAAAACGCCCAGTAATGCTGTAA
- Protein Sequence
- MESSEQKIKREFHKYPKEALNNALEKIRKHNWPIRKASREYGVPRGTLQDRIHGRVVEKPRRMGPETVLSLAEEQKLVKWLVDLAKCGFPQKPTDLLNMVQKILREDKRRTPFKDSLPGKTWYYAFLRRHNELSLRTAEGLSKGRAIVTEESIRKWFRDLKEYLEEIAAADILEDHSRIFNGDETSFSLSPKTGVVLAPRGWKNLYTVQQGNEKETITVLFLFSADGQMLPPLVVFPYVRPPQAVVKSMPDKWVLGRSESGWMRSETFFEYVANSFNEWITESNIKRPVML
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00974582; iTF_00974581;
- 90% Identity
- iTF_00974581; iTF_00974582;
- 80% Identity
- -