Mqua045349.1
Basic Information
- Insect
- Melangyna quadrimaculata
- Gene Symbol
- -
- Assembly
- GCA_949320155.1
- Location
- OX439484.1:70523930-70525141[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-10 2.4e-07 32.4 0.0 4 38 113 148 110 152 0.86 2 2 3.4e-11 5.2e-08 34.6 0.1 5 39 224 258 221 263 0.92
Sequence Information
- Coding Sequence
- ATGTCACCGGAACAATATTATGAACCGAATCTACCAGTAATAAGAGTTTGCTCAGGAAATGATGAGTACATAATATACGAATTAAAAAGTGATAGTGAACCGACGTATAGCTATGTTGTCACAGATCCTAAAAAACCACCGCCTGACTGTGTGAAAGATAATAAAATGTCTGATAATATCCCTTGCAGTACTACCGAAGTAATAGCAAAACCGGGACCATACACAATCAGTATTGAACTACCAGTTGAAAATATTGTTCAAACCGATATTTGTAAGGAAAACTCTGGAAAAACAAAGTGTGCTTTAGCTCGCAAAAGACTCAAAGAAGCTCGCAAAAGACTCGCAGacgctgttgttgctgttgtcaaTAATGGCATGACCATTGGTAAGGCAGCAAAAGCCTTTCAAGTGTCGAAGAGTACCCTGTGGAGGCAAGTCAACAAACAAACCGATTGCCGAAAAAAGAAAGTCGACGAAGATCTCAATAAGAAAATTATTGATCGTATCTGTGCAGGTGAATGTCTCTCAGAGATTTCAAGATCCCTAAAGGTTGCTAAATCTACAATTCACGTACATAAAGTTCGACTAGCCAAAGCTGGTCAACTTCCAGCGAATGTAACCTTAAGGGCACCTCTAGATAAAATCGAACAACTTGCTATCAAAAATCGTATAATTCGAGCTTTTCGTGCCATTCGCGTGAACGGCTTGTCATTACGTTTAGCAGCAACGTATTTCTCAGTACCACGTTCGACCCTGTGGAAACACATACGGCGGTTTAGAGCTTCTCAAAAGAAACAAGGAAAAGATGCCCAGCAATGCAAGGATTCTGAAAAGGCTGCAGCAAATAGAAATAGTTCAACAGATAAAAGGAATGAAGAGAATAGTAGTACAGAAGAAGAAGCAGATGAATATGATgaagcagaagaagaagaaggaacagaagaagaagaagcagaggaagaagcagaagaagaagaagaagaagaagaggaaGAGGAAAAGGAGACAGAAAATGAAGATGAAGATGTTACTGCAAAAAGTGAAATTCCTTCTGATGCAAACTCTACAACAACTGAAGATGAATTTCAAGATGACTTTGATTTACTGGATTATTGTGAGAAATACGCAGCTGATCCAAATGAAGAAGGAGACTTTTTCATAGGTTTTGACTTTGAGAATTTTGAGGAGTATGTAAAGACTGAGCTTGACTGA
- Protein Sequence
- MSPEQYYEPNLPVIRVCSGNDEYIIYELKSDSEPTYSYVVTDPKKPPPDCVKDNKMSDNIPCSTTEVIAKPGPYTISIELPVENIVQTDICKENSGKTKCALARKRLKEARKRLADAVVAVVNNGMTIGKAAKAFQVSKSTLWRQVNKQTDCRKKKVDEDLNKKIIDRICAGECLSEISRSLKVAKSTIHVHKVRLAKAGQLPANVTLRAPLDKIEQLAIKNRIIRAFRAIRVNGLSLRLAATYFSVPRSTLWKHIRRFRASQKKQGKDAQQCKDSEKAAANRNSSTDKRNEENSSTEEEADEYDEAEEEEGTEEEEAEEEAEEEEEEEEEEEKETENEDEDVTAKSEIPSDANSTTTEDEFQDDFDLLDYCEKYAADPNEEGDFFIGFDFENFEEYVKTELD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -