Basic Information

Gene Symbol
Kdm5
Assembly
GCA_949320155.1
Location
OX439486.1:6572114-6582138[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.1e-24 8.8e-21 76.2 0.0 2 89 166 249 165 249 0.95

Sequence Information

Coding Sequence
ATGGCGGAAACTAGCCGAATTTCAACAAATCCAAACTGTTCACCACCACAATTGACATCTCGCCCGCCTGCATCAGCCTATTCAATTCAATGGCCACCAACAGCAATAGCTCCTTCGCAAGCCGATAGTCCACCAACGTCGACGGTTGGTAGTCCAGCAAAAGGCCACGAGTCTTTAGGAGGGGGTGGAGGACATAACAATCGCAGTAAAGCCTATCAGCATCACCCGCACAGTTCGTCGACATTTtcgcaaaacaaaaatcaagagtatgaatttttaaagccCTCCGAGTGTCCGATTTTCCGACCGAACgaagatgaatttaaaaatcCCCTCACTTATATAAGCAAAATACGGCCAATTGCTGAGAGGTATGGTATTGCGAAGATTTTGCCGCCAAAAACGTGGACACCACCGTTTACTGTGGATGTGGATAAACTTAAGTTTACTCCTCGGGTTCAACGATTAAATGAGCTGGAAGCAAAAACTCGTGTCAAGTTGAATTTCCTGGATCAAATCGCAAAATTCTGGGAGCTTCAGGGATCTTCGCTTAAGATTCCCATGGTCGAACGTAAGGCTTTGGATTTGTATTCCTTACATAGAATTGTTCAAGAAGAAGGAGGCCTTGAGCAGGCAACTAAGGAGCGCAAGTGGTCGAAGGTAGCACATCGGATGCAATACCCACCGGGAAAGAGCATTGGAGCAATTCTTAAAGGTCATTATGAAAGAATTCTGCATCCCTTCGATATCTACACATCGGGGAAGGTTATTGACATTAAATTGGAGTCGGAGAGTGATGATAAAGACTATAAACCGCATGGTATTGTATCGCGCCAACAAATAACTCCACCTAATGAAACAACGGCTCGACGATCGAAGCGATTTGCCAATATGAACGCCAGTAAAAAGTCAGCTTGTGGTTTGGGCACAATTTCTGCAAACATAAAGCCAGAAATTGAAGATGACAAGAAGACGGTGAAGAATTTAGGCGGAGTTGCACGGACGGGTCGAGGAAGATTCATAAGACCACCGACTCCAGCTTTGTTAATCCATAATGATCCTCTGGCCAAGTACATTTGTCACATCTGTAATAGAGGTGATGTGGAGGAAGCAATGTTGCTCTGCGATGGATGCGATGACAGTTATCACACATTCTGTCTGCTGCCGCCGTTGCATGATATTCCCAAAGGAGACTGGCGTTGTCCCCGATGTGTAGTTGAGGAAGTCAGTAAGCCAACAGAAGCTTTTGGCTTCGAACAGGCTCAACGGGAATACACTTTACAGCAATTTGGCGAGATGGCTGATCAATTTAAAGCCGACTACTTTCACCGGCCGGTGCACTTGGTGCCCACAGATTTGGTGGAGCGCGAGTTTTGGCGCATTGTCTCGTCCATTGATGAAGATGTTACTGTTGAATATGGTGCCGATTTGCATACAATGGACCATGGATCGGGATTTCCAACGAAGAGTTCGTTATTCTTACTGCCGGGCGATCAAGAATACGCAGAATCCAGTTGGAATTTGAATAATCTTCCACTGTTGGAGGATTCGATCCTGGGTCACATCAATGCTGATATAAGTGGCATGAAAGTTCCCTGGATGTATGTGGGAATGTGCTTTGCCACATTCTGTTGGCATAACGAAGACCATTGGTCCTACTCGATCAATTATCTGCATTGGGGTGAGCCGAAAACTTGGTACGGTGTTCCTGGTAGCTACGCTgaaacatttgaaaaaaccATGAAGAGTGCCGCTCCGGAGCTTTTTGCCTCGCAGCCTGATCTCTTGCATCAGCTGGTCACGATAATGAATCCGAATATTCTTATGAATAGTGGTGTGCCGGTTTACCGCACTGACCAGCATGCCGGGGAGTTTGTTATAACTTTCCCTCGTGCATATCATGCTGGTTTTAATCAGGGCTACAATTTCGCTGAGGCGGTTAATTTCGCACCTGCCGACTGGCTAAAAATGGGACGTGATTGCATTAATCATTATTCAATGTTGCGACGTTTCTGTGTCTTCTCACACGACGAACTTGTCTGCAAAATGGCACTCGAACCGGATAAACTTAATTTTGCCATTGCCACGGCATGTTACATCGACATGGTCAAAATGGTAGATTCAGAAAAAAAGCTGCGTAAGAGCTTGCTTGAATGGGGTGTCACCAAGGCGGAGCGTGAAGCCTTCGAGCTGATACCCGACGATGAACGCCAGTGTGAAGTTTGTAAGACCACCTGTTTTCTCTCGGCGGTGGCGTGTAAATGCACAAAACAAATCGTATGCCTTCGTCACTACTCGGAGCTATGTGAATGCAAGCCGGAAAATCATTCGTTGCAATATCGCTACACTCTTGATGAGATGCCTTTAATGCTAAAAAAACTCAAAGTTAAGGCGCTCAGCTTTGAACTTTGGCTAACTAAGTGCCACGATGTCATCGAACCACGTAAACCTGGCTGTAAAATAACCCTGGAGGATTTGCAAGAGTTGGTGCAGGAAGCTGATCGCAAGAAGTACCCCAGTTCGCTATTGATAGATCGCCTTAACTCTGCAGTGCTGGAAGCTGAGAAATGTGTGACAGTAATTCAACAGTTGGATATAAATAAAGTTCGTACACGCACTCGTCATTCAAACGATTCCACAAAATACAAATTGACGATGGATGAACTGGAGCTATTTGTCGAAGAAATCGACAATCTATGCTGTGTCATCAAAGAAGGTCAGAGTGTTCGGGAGTTACTTGAGTTTGGTAAAAATTTTGTTACATCCGCCGATGGCTTACTGTCCAAGAAAATCAACAAAGTCGAAGAGAAGACGATCGAAAAGGTCATCGATGAAGGTCAATTGCTGTGCATCGAGTTGCACGAGTTGAAAAATCTTCGCATACGGTTCGATCAAGTTGTGTGGTATAATAAGTCACGTCGCTATCGCAACTCCAGCTCGAAACTGCAAATAGTAGAAATAAATCGACTCATTCAAGATGGCCAGAAACTTATCCCAGATCcggttttagaaaaagaaatcgGTACACTGCAGGGAATCGTGCTGTCAGCCGAAGCTTGGGAGAAGGCAGCAAAGTCCTGCTTCCAAACGACAACTCAAAGTGATTTGCCAGAAATTGAACTAATTCTCGAGGCAGCCGAAAAGATTGCTATAGAGCTACCTTCAAAGCCAGCCCTCAAAGAGGCGTTGAAAAAATCGCGTGACTGGCTGGTCGCCGTTGAGAATCTGCAAAAAAACGAACACTATCCGTATTATCACACCCTCGAGGCGGTAGTCTGTCGCGGACTGAATATTCCACTGAAACTCGAAGAGTTGGATCGCATGAAGAAACACCTCGACGCAGCACGTGAATGGAAAGAGAAAACGGCTAAAGCATTCCTCCGTAAACACACCCGATTCACATTGCTGGAAGTTTTATCACCACGTACAAGTGCCCTTATGACAGGTAACACTAGTCAATGTAATCTCCTTAAACGAATTCCCCCCGAAGAGCAATTTACTGAAGATTTAAGCCCAGCCCAGATGGTGGATGCATTTAAAAAGGCTGAGGAAAAAGAAATTAGCGAGATGCGTGAGTTAAGGCGTTTCAATTTGAAGACAGCAGTTAATCCAACTGTTGAGAGGAAATATTGCTTCTGCAAGGGCAAGCACTCGGGGCAGATGTATTTGTGCCAGTTATGTGCCGATTGGTTTCACAAGGAATGCGTGCCCAAAGTTCATTGGAAAGACGGTTTGATTGTCACTCAGAATGGGCAACCAGTGATGACTTGTAAATACTTGTGTCCATCTTGCATGAGGTCACGTCGACCCCGATTGGAGGCGATTTTATCTTTATTAGTATCGTTGCAACGGCTACCAATACGATTGCCGGAGGGTGAGGCTTTGCAATGTTTGACTGAACGTGCAATGAATTGGCAAGATAGAGCTCGTCAAGCCTTTGTCCTCGAAGACGTTGCTGCTGCTTTGTCATATTTAAACAGTTTCCGCCAGAAAAAGGTGGAAATCGTCAAAGATGATCTTTTGACTGAGGAGAAAAAAGATACATCGACGAAGCTGCTTGATGGAGGTGGCGAACAAACTATCGATGGCGATCTCACCGAATCGGACTTGGCAAATGATGACAGTTGTGGCGAAGAGTATTCCAATATCATTTTTCCACGTAGCGAAGGCGAAgaggaacaacaacaacatatgGATATCGATAAGGAATCGTTATTAATGGCATCGGTTTTAGGAAGTGAAGAATTGCGAACGAATGACCTTTTAACTTCTGATATTAATCTGTTTGAATCGAAAAAAACAACACCGGGTGGAagtgAAATCGAACATGCATATTCAGTTCCGTCTTCAACAATAATCCAAACTGAGATAATACTCACCAGCAACATCAAAGCACCCACACCATCGCCGCCTATTCTtgttgaattgaaaaaatccaCGCTAGAAGTTCTTGAAGGCCTAATGTTGGAAGGTGATTTGCTGGAAGTATCGTTGGATGAAACAAATCACATATGGAAACTTTTGAATTTAGCTAAGTCACAAAATACTGACACTACTTCTTCAACACCTATTATACAATCCCCAAATACTcaAAAGAAGCGAGAATTATTAGCGACGGCAAGAGGATTCAAAAAACGCCAAATGCTTGATGGAACATCAACAACTCCACCAGTTAAACGATTATGGAAAGGCTCGGAGAGCAATCGTAAGACAATAGGCAAAcgtgagaaaaaaatcaaagaggGCGCTTTAACACCTGCCATAACTGCCGGCGGCGACACATCCGATAAAGTTGCCGATTCTGAAATAACAAATAGCAGTAGTGCTAAAccgtcaacaacaacaacaaccacaggAAACGTACGAAAACGCAAACGTGCCGGCGGTGGTGGCGGCAAATCATCGGTTAGACATCATGATATGTCTATGATGAACTCTACATCCGATGACGATGAGGAATGTCGCGCTCAAAATTGTCACAAGCCTTCAGGTCGCGAAGTAGATTGGGTGCAATGTGATGGAGGCTGCAACGAATGGTTCCATATGTTCTGTGTAGGATTAGATCGAAAACAAATAAAGCCAGATGATGATTATATTTGTAAACGTTGTATGAAATCCAATGCAGAGAATAATCCCTCTGTTGCTACTGCTGTGGTTACAACTGCAGCTGCAAATAATCAGCAGCAACAGTCTCCTTCGATTATTGAAACTTCCATGTCATCTTTGCTTGAAAAATCAACCATCTTGGACACCATCTCACCATCAGCCGATGTAACTCCTGTTCAAACAATATCAGTTATATCAACTCTTTCATCGACCCTTTCACCAACAagtacaaaaactcaaaaagataatgtgagttaa
Protein Sequence
MAETSRISTNPNCSPPQLTSRPPASAYSIQWPPTAIAPSQADSPPTSTVGSPAKGHESLGGGGGHNNRSKAYQHHPHSSSTFSQNKNQEYEFLKPSECPIFRPNEDEFKNPLTYISKIRPIAERYGIAKILPPKTWTPPFTVDVDKLKFTPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYSLHRIVQEEGGLEQATKERKWSKVAHRMQYPPGKSIGAILKGHYERILHPFDIYTSGKVIDIKLESESDDKDYKPHGIVSRQQITPPNETTARRSKRFANMNASKKSACGLGTISANIKPEIEDDKKTVKNLGGVARTGRGRFIRPPTPALLIHNDPLAKYICHICNRGDVEEAMLLCDGCDDSYHTFCLLPPLHDIPKGDWRCPRCVVEEVSKPTEAFGFEQAQREYTLQQFGEMADQFKADYFHRPVHLVPTDLVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLFLLPGDQEYAESSWNLNNLPLLEDSILGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSYAETFEKTMKSAAPELFASQPDLLHQLVTIMNPNILMNSGVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRDCINHYSMLRRFCVFSHDELVCKMALEPDKLNFAIATACYIDMVKMVDSEKKLRKSLLEWGVTKAEREAFELIPDDERQCEVCKTTCFLSAVACKCTKQIVCLRHYSELCECKPENHSLQYRYTLDEMPLMLKKLKVKALSFELWLTKCHDVIEPRKPGCKITLEDLQELVQEADRKKYPSSLLIDRLNSAVLEAEKCVTVIQQLDINKVRTRTRHSNDSTKYKLTMDELELFVEEIDNLCCVIKEGQSVRELLEFGKNFVTSADGLLSKKINKVEEKTIEKVIDEGQLLCIELHELKNLRIRFDQVVWYNKSRRYRNSSSKLQIVEINRLIQDGQKLIPDPVLEKEIGTLQGIVLSAEAWEKAAKSCFQTTTQSDLPEIELILEAAEKIAIELPSKPALKEALKKSRDWLVAVENLQKNEHYPYYHTLEAVVCRGLNIPLKLEELDRMKKHLDAAREWKEKTAKAFLRKHTRFTLLEVLSPRTSALMTGNTSQCNLLKRIPPEEQFTEDLSPAQMVDAFKKAEEKEISEMRELRRFNLKTAVNPTVERKYCFCKGKHSGQMYLCQLCADWFHKECVPKVHWKDGLIVTQNGQPVMTCKYLCPSCMRSRRPRLEAILSLLVSLQRLPIRLPEGEALQCLTERAMNWQDRARQAFVLEDVAAALSYLNSFRQKKVEIVKDDLLTEEKKDTSTKLLDGGGEQTIDGDLTESDLANDDSCGEEYSNIIFPRSEGEEEQQQHMDIDKESLLMASVLGSEELRTNDLLTSDINLFESKKTTPGGSEIEHAYSVPSSTIIQTEIILTSNIKAPTPSPPILVELKKSTLEVLEGLMLEGDLLEVSLDETNHIWKLLNLAKSQNTDTTSSTPIIQSPNTQKKRELLATARGFKKRQMLDGTSTTPPVKRLWKGSESNRKTIGKREKKIKEGALTPAITAGGDTSDKVADSEITNSSSAKPSTTTTTTGNVRKRKRAGGGGGKSSVRHHDMSMMNSTSDDDEECRAQNCHKPSGREVDWVQCDGGCNEWFHMFCVGLDRKQIKPDDDYICKRCMKSNAENNPSVATAVVTTAAANNQQQQSPSIIETSMSSLLEKSTILDTISPSADVTPVQTISVISTLSSTLSPTSTKTQKDNVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01211684;
90% Identity
iTF_00426136;
80% Identity
-