Basic Information

Gene Symbol
Kdm5
Assembly
GCA_949320155.1
Location
OX439483.1:164001954-164020336[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.1e-25 5.8e-21 76.8 0.1 2 88 210 292 209 293 0.94

Sequence Information

Coding Sequence
ATGTCGACGAAAGCTAACAAAGCAGCAGCGGCAGCAGAAGTTTCATCATCGGCGTCGTCAGGAGGTGGAGTGTCAGTGGGGGGCtcgccaacaacaacaacaaatggaACACCACAGAGACGCCTTAGGACTCGAACCTCCCAATCGGCCAGTGGTAGTGACAAAAAGAACAGCGATCGTCTCTCTACGTCGAATACGACCACAACATCGCAGTCATCCGATTCGAGTTCATCGCTTCCCGGTGGTGCTACAACTGCTGCTGGCAACGGTCTGGCTGGTCTTGATGATTCGGCAAAGaagaaaaaccaacaacaacaacaacaatttgtCAGAAGCAAACCCTCCCCTCACACCCAGCCACATTCCTCGTCGACATTCTCCcagaataaaaacgaagaattCCACTTTGACACGCCACGTGAGTGTCCAGTCTTTCGTCCCACAACCGACGAATTCCGAAATCCACTAGCTTATATCTCGAAAATCCGACCGATTGCCGAGAAGTGCGGCATTGCTAAAATCCTGCCGCCAGCCGAATGGCGTCCACCATTTGCTGTTGATGTTGATAAGCTCAAATTTACCCCTCGCGTTCAGCGTCTCAACGAACTGGAAGCGAAGACACGTGTTAAGTTGAATTTCCTCGATCAGATTGCCAAATTCTGGGAACTGCAAGGTGCTTCGCTCAAGATCCCTATGGTGGAGCGAAAGGCATTGGATTTGTATTCGTTGCATAGAATTGTGCAAGAGGAGGGTGGCATGGAACAAGCGACTAAGGAGAGAAAGTGGGCCAAAGTGGCCAATCGGATGTCCTATCCGTCGAGCAAGAGTGTTGGAGccacattgaaaatgcattatGAGAGGTTGTTACATCCTTATAATGTGTACACATCGGGCAAGATCATCGATATGAAGATAGAGGATGATATAGCTGGGACAGATGATTGTAAGGACTACAAATCTCATGAGATAGTGTCGCGCCAACAAATAACCCCACCGAATGAGACCACAGCTCGCAGATCGAAGCGTTTTGCCTTGGGAAAAGGTGCAGTATGTGGCCTAGGAGCCACATCTTCTTCGACATCATCGTCGTCGGGGATTGCCGGGCACATCGAGACAAAGGAAGACTTCAAACGCAATCTGATTGCCACTTTTAATGACATAGCTGCTGGTGGGGGAACCAAGAATACCGCGGCCCTAACCGAAATGGTGGATCCTCTGATGAAATACATATGCCACATTTGCAATCGTGGTGACTCCGAAGAGAATATGCTACTTTGTGATGGTTGCGATGATAGTTACCATACGTTCTGTTTGATTCCTCCATTGGTTTCGATTCCTAAAGGCGAATGGTTGTGTCCACGGTGTGTGGTCGAGGAGGTGAGCAAGCCCACAGAGGCATTTGGGTTTGAACAAGCTGAACGGGAATACACTCTTCAGCAATTCGGTGAGATGGCTGATCAATTCAAAGCGGACTATTTTCGCAAACCCGTGCACATGGTGTCGACGGATTTGGTTGAACGAGAATTCTGGAGAATTGTCTCGTCCATTGATGAGGATGTAACTGTGGAGTATGGAGCTGATCTCCATACTATGGACCACGGATCGGGATTCCCGACGAAAAGTTCTTTATATCTCCTGCCCAGTGACCAGGAGTATGCCGAATCACCATGGAATTTAAATAACCTTCCTCTGCTTGAGGATTCGATTTTGGGTCACATCAATGCCGATATCAGTGGCATGAATGCCCCTTGGATGTATGTGGGAATGTGTTTTGCCGCCTTCTGCTGGCACAACGAGGATCACTGGAGCTATTCCATAAACTATCTTCACTGGGGTGAGCCCAAGACTTGGTATGGAGTTCCCGGTTCATGTGCTGAAGCTTTCGAAGAGACCATGAAAAAGGCAGCTCCGGAATTATTCGCTTCTCAACCCGATTTACTTCATCAATTGGTCACGATCATGAATCCAAATATTCTAATGAACAATGGTGTTCCTGTTTTTCGTACTGATCAAAATGCTGGCGAATTTGTCATCACTTTCCCGAGAGCCTATCATGCTGGATTCAATCAAGGTTATaattttgcagaagctgttAATTTTGCCCCTGCCGATTGGTTGAAAATGGGACGAGAATGTGTCAACCATTACTCAATTCTAAGACGTTTCTGTGTATTTTCACACGATGAACTGGTCTGTAAAATGGCCCTGGAGCCGAATAAACTGACTTTTGGCATTGCAACTGCCTGCTATATCGACATGGCCGAAATGGTTGACTCTGAGAAGAAGTTACGCAAATCTCTGCTTGAATGGGGTGTGACTAGAGCCGAAAGGAAGGCTTTCGAACTAATTCCAGATGATGAACGACACTGTCTGGAGTGCAATACTACTTGCTTCTTGTCTGCGGTGTCATGTGAGTGTAAGAGTTCAATTGTCTGTCTGAGGCACTACACAGCTTTGTGTTTTTGCGGTGCAGAGAAGCACACTTTACAGTATCGCTATACTCTGGATGAGATGCCGTTAATGCTGCAAAAACTCAAGGCAAAGGCACAGAGTTTCGAGAGGTGGCTATCACGTTGCCGCAACATCATGGACACGAATACACCGACAGTGGTGTCATTGGCCGAGCTACAGGAACTGACAAAGGAGGCCGAATTAAAGAAGTTTCCCAGTTCGATGTTAATTGACCGATTGAATGCTGCCGTTCTGGAGGCAGAGAAGTGTGTCACTGTTATACAGCAATTGGGAATAAATAAGGTTCGAACTCGACTTGACCATTCAATTGACGCCGCTCAATATAAGCTCACCATGGAAGAGCTTGAATTATTCGCACAAGAAATCGACAACCTCTGCTGCATCATCGAAGAGGGTCGCAGTGTTCGCGAGCTGCTCGCCATTGGCAAAGACTTTGTGGCACGTGCAAAAGTCATGCTAGCCAACCCCACAGATTTGGCTGATGAAAAATCAATCGAAACCTTAATTGACGACGGATGTGTACTCCGGATCGAGATGCAAGAACTTATTGAACTGGGCAATCGTTTGAAGGCCATCAAATGGATCAAACGCTCAGAGATGCTGCGTGATTCTACCGTGAAGATGACAGGCGCTGAGATTAAAAATCTCTTGTTAGCCGGACAAGATCTGGAGAGCGATCCAGCTGTGGATAAGGAGATGCAAAATTTGCACCAAATTCTAGGACAAATGGACGCTTGGGAAAAAATGGCAGCTAAATATTTTCGTGGAACTACACAACACGATTTGCAGGAAATCGAAATGTTTTTAAAGAATGGCGATGAAATCAATGGACAACTGCAATCATATGGAGCCCTAAAGGATGCCATCAAAAAGGCAAAGGAATGGCTGAGATCGGTGGAAGCGTTACATGCAAATGATCATTTTCCTTATTGTCAAACACTCGACGAGATTGTCCAACGTGGCAagaacattcccatacaactagaaGAGCTCTTTCGAATGGAGGAACACTTGAATAGTGCCAAGGAATGGAAGGACAACACTGCGAAGGCATTCCTTAAGAAGAACACATATTACACCTTGTTGGAGGTGTTAATGCCCCGAGATGAACCAGTTGTCATTGATTCGGATAGCAAAATACCATTCGAAGCGGATTTCTTGAAGGATATGAACCCTGCTCAGATTGTGGACTCGTTTAAAACGGCCGAGGAGAAGGAAATAAGAAATATGAGAGAACTGAGACGCTTGAATATGGGAAAGAACCCACTAAAAGATGATTATTGTGTGTGTAATAGCAAGTTCCATGGTGTAATGTTTAACTGTCAGCTATGTAAGGATTGGTTCCACGAGGATTGTGTCAAGGAGAGCTCGTCAAAGTCAAGATCCGCCGCTAGCACTCCCACGCTTGTGGGAAGTCCAGCTCCTCCTACGGTATTTAATGGCATCCATACCAAGCCGAAATTCCTGTGTTCGTCGTGTGTGCGATCGAAGAGACCTCGTTTGGAGACAATATTACCATTGTTGGTTTCCCTACAGAAACTCCCAATTCGATTGCCAGAAGATGAAGCACTTAGGTGTCTGGCAGAGCGTGCAATGCATTGGCAGGATCGAGCTCAGAAGGCTTTGTCAAGTCCTCAAATTGCCTCGGTACTGGAATCCTTAAAACGATCAaagtcaaaacaagaaaaaccaaTTCGCCGCAACCACCTGCAACTGAGAAAACCAATATCCCATCCGGAAAAACAGTCCAGCATCTCAGATGGTGAAGATCTCGACCATGAAGAGGACGAAgaagatgatgacgatgatgaggGCCGGCTGCGAATCGACTTGGATGGTTTTAGTGACGATGAAGACTCCTCCCAGAATCTGTTAGATGAACAAAATAACAAGAATTTCTCCCTTAAATTGACTGACATGGAATGTGAAGCCATGGAAGAACTAATGATGGAAGGTGATCTACTCGAAGTCTCTCTAGATGTGTCTCATGACTTGTGGCGTGTCATAAAAGTCTCTTATCCACTAGCTTCAGCGGACCTAGCCGCCCGCTATCAACAGACTTTCAATTTCCCCTCAGAAGAATCCAACGACAGTCTAGTCCACCAGCATACCAACAACAATTCGAGCAGCAGTAGCGGCAGTGGTGGCGTTAATGCTGTCAAAAAACGTCGTTCCTTAGATCCGGCGGCGCTGTGTCCGGTGCCGAGGAAGAAAACAGCCACCCCAAACAAGTTGCAGcagacaaatattaaaaaatccgTCGCCGGACGTCGCTCAGAGCCCACAAAACAGACAACAACAATCTCGACAGAGGACAACACAGAAAACAACACCCCAACGCAGACAAAAGGTGGCAATACGAAGAAGCGAAAGCGCGCCACCAACAAAAAGCTCTCGCAACGTGCCCAACAAGCACAGCAAGAAGACGACGAGGAGGAGTGTCGTGCGGAGAATTGTCACAAGCCAACTGGCCGCGAGGTCGATTGGGTGCAATGCGATGGCGGCTGCAACGAATGGTTCCACATGTACTGTGTTGGTCTCAATCGGAGTCAAATTAAGGCCGACGACGACTACATATGCTTAAGGTGCGCAAAAGCGAATCCATCGCAAACCCCCAACAAAAACCGAACGCAGACGAGATAG
Protein Sequence
MSTKANKAAAAAEVSSSASSGGGVSVGGSPTTTTNGTPQRRLRTRTSQSASGSDKKNSDRLSTSNTTTTSQSSDSSSSLPGGATTAAGNGLAGLDDSAKKKNQQQQQQFVRSKPSPHTQPHSSSTFSQNKNEEFHFDTPRECPVFRPTTDEFRNPLAYISKIRPIAEKCGIAKILPPAEWRPPFAVDVDKLKFTPRVQRLNELEAKTRVKLNFLDQIAKFWELQGASLKIPMVERKALDLYSLHRIVQEEGGMEQATKERKWAKVANRMSYPSSKSVGATLKMHYERLLHPYNVYTSGKIIDMKIEDDIAGTDDCKDYKSHEIVSRQQITPPNETTARRSKRFALGKGAVCGLGATSSSTSSSSGIAGHIETKEDFKRNLIATFNDIAAGGGTKNTAALTEMVDPLMKYICHICNRGDSEENMLLCDGCDDSYHTFCLIPPLVSIPKGEWLCPRCVVEEVSKPTEAFGFEQAEREYTLQQFGEMADQFKADYFRKPVHMVSTDLVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPSDQEYAESPWNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSCAEAFEETMKKAAPELFASQPDLLHQLVTIMNPNILMNNGVPVFRTDQNAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSILRRFCVFSHDELVCKMALEPNKLTFGIATACYIDMAEMVDSEKKLRKSLLEWGVTRAERKAFELIPDDERHCLECNTTCFLSAVSCECKSSIVCLRHYTALCFCGAEKHTLQYRYTLDEMPLMLQKLKAKAQSFERWLSRCRNIMDTNTPTVVSLAELQELTKEAELKKFPSSMLIDRLNAAVLEAEKCVTVIQQLGINKVRTRLDHSIDAAQYKLTMEELELFAQEIDNLCCIIEEGRSVRELLAIGKDFVARAKVMLANPTDLADEKSIETLIDDGCVLRIEMQELIELGNRLKAIKWIKRSEMLRDSTVKMTGAEIKNLLLAGQDLESDPAVDKEMQNLHQILGQMDAWEKMAAKYFRGTTQHDLQEIEMFLKNGDEINGQLQSYGALKDAIKKAKEWLRSVEALHANDHFPYCQTLDEIVQRGKNIPIQLEELFRMEEHLNSAKEWKDNTAKAFLKKNTYYTLLEVLMPRDEPVVIDSDSKIPFEADFLKDMNPAQIVDSFKTAEEKEIRNMRELRRLNMGKNPLKDDYCVCNSKFHGVMFNCQLCKDWFHEDCVKESSSKSRSAASTPTLVGSPAPPTVFNGIHTKPKFLCSSCVRSKRPRLETILPLLVSLQKLPIRLPEDEALRCLAERAMHWQDRAQKALSSPQIASVLESLKRSKSKQEKPIRRNHLQLRKPISHPEKQSSISDGEDLDHEEDEEDDDDDEGRLRIDLDGFSDDEDSSQNLLDEQNNKNFSLKLTDMECEAMEELMMEGDLLEVSLDVSHDLWRVIKVSYPLASADLAARYQQTFNFPSEESNDSLVHQHTNNNSSSSSGSGGVNAVKKRRSLDPAALCPVPRKKTATPNKLQQTNIKKSVAGRRSEPTKQTTTISTEDNTENNTPTQTKGGNTKKRKRATNKKLSQRAQQAQQEDDEEECRAENCHKPTGREVDWVQCDGGCNEWFHMYCVGLNRSQIKADDDYICLRCAKANPSQTPNKNRTQTR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01520752;
90% Identity
iTF_00974422;
80% Identity
-