Mqua027216.1
Basic Information
- Insect
- Melangyna quadrimaculata
- Gene Symbol
- retn
- Assembly
- GCA_949320155.1
- Location
- OX439483.1:316091450-316095129[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.2e-15 5e-11 44.9 0.0 2 64 65 127 64 143 0.90 2 2 5.4e-15 4.4e-11 45.1 0.0 2 64 233 295 232 312 0.89
Sequence Information
- Coding Sequence
- ATGCAAGTCCTCGATATAAAAGTGGGCCTAATGGATGACACCAGGCACAAAAGACAAAGACAAAAGAATCCTGCGTCTAACTCACCAATATCCAGCGAAACATCCAACTCATCACATCAAAACAACGGCTGGAGTTTTGAGGGACAGTATAAACAAGTTCGACAGCTCTGTGAATTCAATGATGACCCTAAACGTAAAGAGTTTCTCGAAGACTTGTTTTATTTCATGCAGGAGCGAGGTTCACCCATTAATCGCTTACCAATCATGTCAAAATCAGTTCTTGGTTTGTACGAGCTATACAACTTGGTCATTGCCCGGGGTGTCCTCGTGGATGTGATCAACAAGAAGCTTTGGCAGGAAATCATCAAAGGCCTACTTTTGATATCAAGCAGCGTTTACATTGCGCACACAACTTCAAGTCCCGATGAGATTGCTTTAGTAAAATGGACAGAACAGGTTGGCTTAACACTAATCGCAAGAGATGTGAATTCCATGACTCTGCAACTGAAGGCACATGTCCTAACGATGTTTCATTCCCCAGCCACCAGGCACAAAAGACAAAGACAAAAGAATCCTGCGTCTAACTCACCAATATCCAGCGAAACATCCAACTCATCACATCAAAACAACGGCTGGAGTTTTGAGGAACAGTATAAACAAGTTCGACAGCTCTGTGAAATCAATGATGACCCTAAACGTAAAGAGTTTCTCGAAGACTTGTTTTATTTCATGCAGGAGCGAGGTTCACCCATTAATCGCTTACCAATCATGTCAAAATCAGTTCTTGGTTTGTACGAGCTATACAACTTGGTCATTGCCCGTGGTGTCCTCGTGGATGTGATCAACAAGAAGCTTTGGCAGGAAATCATCAAAGGCCTACTTTTGATATCAAGCAGCGTTTACATTGCGCACACAGTATATAAAGTATCTCTATCCTTACGAATGTGA
- Protein Sequence
- MQVLDIKVGLMDDTRHKRQRQKNPASNSPISSETSNSSHQNNGWSFEGQYKQVRQLCEFNDDPKRKEFLEDLFYFMQERGSPINRLPIMSKSVLGLYELYNLVIARGVLVDVINKKLWQEIIKGLLLISSSVYIAHTTSSPDEIALVKWTEQVGLTLIARDVNSMTLQLKAHVLTMFHSPATRHKRQRQKNPASNSPISSETSNSSHQNNGWSFEEQYKQVRQLCEINDDPKRKEFLEDLFYFMQERGSPINRLPIMSKSVLGLYELYNLVIARGVLVDVINKKLWQEIIKGLLLISSSVYIAHTVYKVSLSLRM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -