Mper011543.1
Basic Information
- Insect
- Melanchra persicariae
- Gene Symbol
- GATA-B_1
- Assembly
- GCA_947386135.1
- Location
- OX376646.1:23407112-23411916[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.6e-18 1.4e-14 53.8 3.9 1 34 62 94 62 96 0.97 2 2 1e-17 3.1e-14 52.7 7.2 1 34 129 161 129 163 0.97
Sequence Information
- Coding Sequence
- ATGGCGCGTCGGGTGACCGCGCCGTCGGGTCGATGCGCGCGCCTGACCCGCGTGTACGTCGCGCCCGGCCTCGCGCCGCCGCTGCCGCACGTGCGCGTGCGCCTCTCTTCGTCAATGAATCACTACCTACTGTACTGTCACTGTCAAGTCGACATGGCGGAGTTTTTCACGGAGGGGCGCGAGTGCGTGAACTGCGGCGCCATCCACACGCCGCTGTGGCGCCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATGAACCGGCCGCTGAAGCAGCCGCGGCGGCTGGTACGTCAGCGCCTCGCCGCGCCCCACGCGCCCCCGCACGACATGGGCACGAAGCGGCCCGGCATGTCGTGCACCAACTGCCAGACCACGACGACGTCGCTGTGGCGCCGCAACTCGCTCGGCGAGACCGTCTGCAACGCGTGCGGCCTCTACTACAAGCTGCACAACATCAACCGCCCGCTGGCCATGAAGAAGGACTCCATACAGACAAGAAAACGGAAACCCAAGAATAGCATAAAAGCGGAGCGCAATATAAAGGCAGCCGTGCAGCGCACCGTCACGTCGGGCGTCAAGATCGAGAACCTGCTGGACAGCGGCTCGGGCGCGTCGGGCGGCGCGCGCTCGCCGCTGGCGCTCAACTACTACGTGCAGCACGCGCTCAAGGTGGAGGAGCCGCCGCCGGCGCACGCTGCGCACGCGCACTCCACGCCGCACCACGCGCACGCGCACGCCGGCCACGCCGCGCACGCCGCGCACGCGCTCTACGACGACGAGTACCGGCGCGCCGCCGACGACCGGCTGGAGCGGCCCACCGTCGTGTCCATGGGCAGCTGA
- Protein Sequence
- MARRVTAPSGRCARLTRVYVAPGLAPPLPHVRVRLSSSMNHYLLYCHCQVDMAEFFTEGRECVNCGAIHTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQPRRLVRQRLAAPHAPPHDMGTKRPGMSCTNCQTTTTSLWRRNSLGETVCNACGLYYKLHNINRPLAMKKDSIQTRKRKPKNSIKAERNIKAAVQRTVTSGVKIENLLDSGSGASGGARSPLALNYYVQHALKVEEPPPAHAAHAHSTPHHAHAHAGHAAHAAHALYDDEYRRAADDRLERPTVVSMGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00071972;
- 90% Identity
- iTF_00121057; iTF_01027906; iTF_01026952; iTF_00071972; iTF_00758820; iTF_01094567; iTF_01247720; iTF_00148137; iTF_00908459; iTF_00907537; iTF_01231220; iTF_00037435; iTF_00623675; iTF_00906716; iTF_00746376; iTF_01028875; iTF_00375920; iTF_00784057; iTF_00785687; iTF_00122011; iTF_00123004;
- 80% Identity
- -