Mper009036.1
Basic Information
- Insect
- Melanchra persicariae
- Gene Symbol
- -
- Assembly
- GCA_947386135.1
- Location
- OX376650.1:21330451-21332736[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8e-07 0.00013 22.0 0.0 4 38 20 53 18 58 0.90 2 2 7.5 3.6e+03 -1.8 0.0 21 30 68 77 67 84 0.88
Sequence Information
- Coding Sequence
- ATGCCGTTCCAATATAAAACAAAAGAAGGTTCTATCCGCAAAAAAGTTATCAAGCAGGAATTACAAAACGCTATTCAAGAAGTCAAATCCGGGTCCTCTCTTAGAAAAACAGCGGTGAAATATGGGATCGATAGGACTACCTTACGTCGATACACTAAAAATGAAAAAAAGCTGGAAGTTTTTGACGAAAAGGGTAGATACAAAGCTGCTCAGGTATTCACAATACCAGAAGAAAAGCTATTAGTCGAATATTTAATAAACTGTAGTAAAATGAATTATGGTCTAACTAGGATCGAAGCGATGAAATTAGCTTTTGAGTTTGCTTCATCAAACTCTAAAAAAATTCCAGACAGTTGGATAAAAAATAATTCAGCTGGAAAAGACTGGTTTCGCGGATTTCTTCGTAGAAATTCTGAAATAAGTCTGCGGACTCCTGAAGCTACTAGTTTGTCAAGAGCTACTAGCTTCAACAAAAAAAATGTAGGTGATTTTTTTGAAAATTTGAGATCTGTTCGAGAAAAGTATAAGTTTGAACCGCAAAATATTTATAATTGTGACGAGACAGGATGTACTACTGTCCAAGACTGCCCTAAGGTGCTAGCAAGTAAAAAGTCGAAACAAGTGGGACAGGTTACATCTGCTGAGAGAGGAACTTTGGTTACAGTCTGTTTTGCAGTCAATGCAATTGGTAATGTCATACCACCATTTTTTATATTCCCTCGTGTGAAATATCGGGAAGATTTTGTGTCCAGTGGGCCAGAAGGGTCAGATGGAGACGCATACACTACCGGGTGGATGACTACGAAAAGCTTCTTAAAATTTATGGAACATTTTAAAAAATACTCTTGCGCGTCAAAAGAAAATCCCGTCTTGCTGATCCTTGACAACCACGAGAGCCATGTAAGCGTAAATGTGATTCAGTTTGCCAGAGACAATGGTATAACATTACTGACTCTTCCTCCACACTGCAGCAATAAATTGCAACCATTAGACGTTGCAGTTTATTCGTCGTTTAAATCAAGATACAACAATGTAATGAACAACTGGATGCTGTCAAATCCCGGTAAAACCGTTACAATTTATAACATTCCTGGGTTTATAAAAACTATGATGTCACAAGCTTTCAGTCAGTCTAACATCCTAAGTGGATTCAGGACTTCAGGCATCCATCCGTTTAATCCAGATATATTTGGAGAAGAAGACTTCATGTGTTCTGCAGTCACAGACAGAAATTTGTCGAATGATGGTGAGTTACTTCCTGCAGATTTCACTTCATCTCAAAACCGTCAAGCTCAACTTATCTTCTCCGCTGATATAGGAGGTCCATCATCTTCGCATCACGATTTAGTTGACATTCCTCGTGTTCCTTCTGATCTAGATTCTTCCGGTAACTCTGAATCCTCGTTTAGCATACTCCAAACCGAAGCAAATGATCAACAGAGCTCGGTCATTGTTCAACCTTTACTTTTACGGGAGGAAAATGTTGATGTTCCTGATCTAGCTCCACCAGCTTGTCAGGAGATTTCGGTCATTGCTGAATCAGCTGATAGTGAGCAAAGTAAGATCGATAATGCTCCAGCCTTATCCACTCCTAAAAAGATCTCAGCCTCAGCTGAAACCTCACATTCATGTGAACAAACTGGTGGTAATCCAATACCATTCGCTTGTATGAAGGTTTCACTTATAACTCCAGAAACAATAAAACCATACCCAAAAGCTGCACCCAGGAAGACGACACGACGTGGCCGTCAACCAGGGAAAACAAAAATTCTAACCCAAACTCCAGAAAAAAACGCAATAGACGATGCAAGACCCAGTGGGAGTGGGATATCTAATCAAATAAAAAAGAAACAAAATAAGAGAAAAAAGTCAAATGTAGGAAAAACAAAAAAACAGATTCTTAGGGATAGTAGCGAAACAGACTGTGAGAATGATGATACAAAAGACGTTGGGGGCAAAATTAAAGCAATTAAGAAGAAAAAAAAGATTGAAAGTGAAAGTAAAAAAAGAAAAACTTGTAACGCCAAGATCAAAAAGCGCATTGAAACCAGTGAAACCGAATCTGAAGAAGAATGTCATGTCATTCCATATGCTGATAGCTCAAGTGATGGTGATTGGGAAGAAGTCCCGAATCTAGATAACCGTTGGTATTGTTTCGTATGCCAAACAGAACAACTGTTAGACATGAGACTGTGCATTTCATGTAACAGATATGTTCACGAAATATGTGTTGGATTGACCAATCAAGATAGTGATCATTTCATATGCCATGAATGCGAAGAATAA
- Protein Sequence
- MPFQYKTKEGSIRKKVIKQELQNAIQEVKSGSSLRKTAVKYGIDRTTLRRYTKNEKKLEVFDEKGRYKAAQVFTIPEEKLLVEYLINCSKMNYGLTRIEAMKLAFEFASSNSKKIPDSWIKNNSAGKDWFRGFLRRNSEISLRTPEATSLSRATSFNKKNVGDFFENLRSVREKYKFEPQNIYNCDETGCTTVQDCPKVLASKKSKQVGQVTSAERGTLVTVCFAVNAIGNVIPPFFIFPRVKYREDFVSSGPEGSDGDAYTTGWMTTKSFLKFMEHFKKYSCASKENPVLLILDNHESHVSVNVIQFARDNGITLLTLPPHCSNKLQPLDVAVYSSFKSRYNNVMNNWMLSNPGKTVTIYNIPGFIKTMMSQAFSQSNILSGFRTSGIHPFNPDIFGEEDFMCSAVTDRNLSNDGELLPADFTSSQNRQAQLIFSADIGGPSSSHHDLVDIPRVPSDLDSSGNSESSFSILQTEANDQQSSVIVQPLLLREENVDVPDLAPPACQEISVIAESADSEQSKIDNAPALSTPKKISASAETSHSCEQTGGNPIPFACMKVSLITPETIKPYPKAAPRKTTRRGRQPGKTKILTQTPEKNAIDDARPSGSGISNQIKKKQNKRKKSNVGKTKKQILRDSSETDCENDDTKDVGGKIKAIKKKKKIESESKKRKTCNAKIKKRIETSETESEEECHVIPYADSSSDGDWEEVPNLDNRWYCFVCQTEQLLDMRLCISCNRYVHEICVGLTNQDSDHFICHECEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00973725;
- 90% Identity
- iTF_01331415;
- 80% Identity
- -