Mper015119.1
Basic Information
- Insect
- Melanchra persicariae
- Gene Symbol
- clz9
- Assembly
- GCA_947386135.1
- Location
- OX376663.1:10593890-10596208[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.9e-12 3.8e-09 36.6 0.0 1 39 25 63 25 67 0.95 2 2 9.4 4.4e+03 -2.1 0.0 25 41 679 696 679 698 0.78
Sequence Information
- Coding Sequence
- ATGGTTCGAAAATATAAAAGAACCTATACAAACATGAGAAACGGTAAACGTTTCATGCCGTACGTCTCTTATACTAATGATGAGTTGAACAAGGCTGTATCAGACGTAAAATCAAAAAAACTGTCTACCAGAGAAGCGGAACAGAAATACGGCGTCCCCAAAAGCACAATTAACCGTCATTTAAAAGATGGAAACCTACTCTATTCAAGACCAGGGCATCCTACATTATTTTCAGAGGCGGAAGAGAAAACGTTCGTCAATTATATTAAGCATATGGGGGAATGGGGATTCCCCTTAGATCTAATGGATTTGAGAGTCTTCGCCCAAAAATATTTACATAGAATAGGAAGGACAGTCTATAGTTTGAAAGACAATTTACCGGGACGGGATTGGGCGGCTTGTTTTTTACAAAGGCATAAAGATGAGATTTCTAACAGATGTGCTGCAAATATATCCTCGGATAGAGCAACTTTAAGCTCAGAGGTGATTGACGCATTTTTTGACCATTATGAACAAAATTTGGAAGATGTTACACCTGATTGTGTAATAAATTATGACGAGACAAACCTGACAGACGACCCTGGATCCAAAAAGTATATTTTCAAGCGAGGAAAAAAGTACCCAGAGAGAATTATTAACAATTCAAAATCATCTGTGAGTCTGATGTTTTCTGGCACAGCATCAGGACTACTTTTACCAACATATGTTGTGTATAAAGCAGAGCACTTGTACGACACGTGGCTCTTAGGAGGCCCAGAAGGCACTAGATATAATAAATCCAAAATCGGATGGTTTGATTCGCTATGTTTTGAAAATTGGTTCCAGACGATCATCATTCCATATGCAAAAACGAAAGAGGGAAAAAAGATAGTTCTTATAGGAGATAATCTATCGTCACATTTCTCGTCAAAAGTTTTGGAAGATTGTGGAAAATTTAATATAAATTTTGTGTGCTTACCACCAAAGGCCACACACATTCTGCAGCCTCTTGATGTTGCCTTTTTCGCTCCTTTGAAACATTACTGGCGAATTATTTTGACTAATTGGAAAAAAGGTGAAGGCCGGAAATGCAAAACGCTTGCTAAAAATAGCTTTCCGGGCCTATTAAATGAATTATTAAAAATGCTGCATGCAGAGGACGCTGCTTCACGAAATCTCAAGTCTGGTTTCGCCAAATGCGGCCTGCTGCCTGTCGACAGAAATAGACCGAAAGAAAGACTGCCTGGGCAAATATCAGATTTGGATATACAGACCAGTGCTTCTGGTGTTATGATAGAGATGTTAGAAGAAATAAGGGGTTGTACCGGTGAAACAATAAGTACCAGGAAGAAGCGCTGCAATGTTCCTCCCGGAAAAAGCATAACATTAGCTGATTTAAGCACTGAAGAACGGAGCAACAAAGAGAAGAGTAAAGCTAATGGAAAAGGAAAAAAAACACGTCCTGTGACAACAACATCTACTATTTTACCGATAATAGAAAATTTAACTCAGCCATCCTGCAAATTACACAAGCAAAAATTGAGCAACACAGGGATGGGTAAGGGTAAAGAAAAACTAACACCATCAGAAACAGAAAGAGGTCTTGAACTTTTAACAATGAATGAAAATACTCAGCCATGTGAAAATGTAACGATGGAACATACAATTCTTACAGAAAATATTGAAAGAAAAAAAAGGCGACTACGTAGTGAAACCACTTCCTCGGATAGTGACATTGAAATAAGCGTTCATAGTGACTCAGACATCTTAAATGTCAGTGATGATATTGTCCAATGTTTCGATAAGTCCCCATTTCGTCAAGAGGTCCTGTCTCCAGAGTCTATTCATGAAGTGTCCTTTGAAAATTTTAATCAGCAGATTGAACCATTATCAGCAAACCCCATGACGAACAACACACCAGAGACGACCCTGAAATTAAAAGAGGCCCAACAAAACGACACACCTGTTTCCCAAGATTACAAAAACATGAATCCGGTGCAACACAGTCTAAGTCCAGTCCCAGGACCAAGTAGAGAAATGGAAGTGGTTGACTGTGAATATAATGTAGGTGACTCCGTCTTGGTGAGATACGTTTTTAAAAAAAATGTGCAATATTTTGTGGGACATATTTTGAGTAAAACTGGCGCTAAGTACAAGATTTCTTTTCTAAAAAAAACTGGGAGGAGTGATAGTACTAGATTTATTAAGACTAAGAAGGTTGATATAGACACAGTAAATATCGACATGATTGTTAAACAGATTGAGCTGTTGGCTTTAAATGAAAAAGAAACAGAATTCGTGTTTTTGAATGATGAAGACATTTTTTTTTTTGAATATTGA
- Protein Sequence
- MVRKYKRTYTNMRNGKRFMPYVSYTNDELNKAVSDVKSKKLSTREAEQKYGVPKSTINRHLKDGNLLYSRPGHPTLFSEAEEKTFVNYIKHMGEWGFPLDLMDLRVFAQKYLHRIGRTVYSLKDNLPGRDWAACFLQRHKDEISNRCAANISSDRATLSSEVIDAFFDHYEQNLEDVTPDCVINYDETNLTDDPGSKKYIFKRGKKYPERIINNSKSSVSLMFSGTASGLLLPTYVVYKAEHLYDTWLLGGPEGTRYNKSKIGWFDSLCFENWFQTIIIPYAKTKEGKKIVLIGDNLSSHFSSKVLEDCGKFNINFVCLPPKATHILQPLDVAFFAPLKHYWRIILTNWKKGEGRKCKTLAKNSFPGLLNELLKMLHAEDAASRNLKSGFAKCGLLPVDRNRPKERLPGQISDLDIQTSASGVMIEMLEEIRGCTGETISTRKKRCNVPPGKSITLADLSTEERSNKEKSKANGKGKKTRPVTTTSTILPIIENLTQPSCKLHKQKLSNTGMGKGKEKLTPSETERGLELLTMNENTQPCENVTMEHTILTENIERKKRRLRSETTSSDSDIEISVHSDSDILNVSDDIVQCFDKSPFRQEVLSPESIHEVSFENFNQQIEPLSANPMTNNTPETTLKLKEAQQNDTPVSQDYKNMNPVQHSLSPVPGPSREMEVVDCEYNVGDSVLVRYVFKKNVQYFVGHILSKTGAKYKISFLKKTGRSDSTRFIKTKKVDIDTVNIDMIVKQIELLALNEKETEFVFLNDEDIFFFEY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -