Mper002250.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Melanchra persicariae
Gene Symbol
Jarid2
Assembly
GCA_947386135.1
Location
OX376643.1:36637182-36667296[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.3e-17 3e-14 53.6 0.0 15 89 657 728 628 728 0.79

Sequence Information

Coding Sequence
ATGTCGTTAAGGTCGCGACGCCTGAGCAAATTAGAAATGAACAAGCTCTTAGCACTAAGTTGTGTGCCATTAAGAAAGAATTCCTTGAAGCGTAAAAAAGCCTCTTCTGACGAGGATGAGCCACTTATTTTCCATAAAACTCGCAAAAAGCGCCGTACTGCTGCTGCCAGTGAAAGTAGCCCTTGGGAGAAATCACTCTCTTCCAAGGACATTAATGTACGTCAAGAGATCACAGAAAAAGAGATCCAAACCAATCCGGTCTCCTCAAAACACACCAAAGATAATAGTGCTAAAAAGAAGACGAGCGCTCCTCGGAAGAGTGTGACTGTTGTCGCCATTAAAGAACACCTTGAGAGTGCACATGAAAAACTTGATAATCTAGTCACCCAGAATGATACGATTGTGCCGGTATACCCGGTAGTAGCCCCAGTCAATTTGATAGAGGTCCCAGATGCTCTGGTAGTAATCCCAGATGCTTCCGTACTAGTTCCAGATGCTCCGGCACTAGTTCGAAAGACTCCAGTACTAGTCCCAGATCCTCCGGTACTAGTTCCAGATGCACAGGTACTAGTCCCAGATGCACAGGTACTAGTCCCAGATGCACAGGTACTAGTTGAAGATGCTGTGGTTACTGCTGCTACCAGACCCCTACAGATGTCTACTGGCCGAGATACCCTAGTAGTAGGCTCAAGTAATCGAGTAATTGTCCCGGTCCCGTTTGTACCATATGAGGCCGACACACCTGAGCAAAATGCGGAATACTTAGAAAGATTGGATAACGCGATGCCTCTCTTAGATGAGTTAGACTTGAGCAATGAGGTGAACAACGATGATGAATCGACAGGGTGGGAGAAACACGTCCAGGTATACGTCCACGTCGCACCGGATCAGACAGTGATGGTAGACTCGCAAAATCAACCTAGTAGTTCTTTATATTACGAGGGGTCATCCGACTCTGATGATGATGGTGAACAGATAATGAGATTTCAAGCCCCGATCAACGTACCAGTACATCGAAGTACCAACGACTCTCCTCAACCTGGACCAAGTGGCATGCAGTCCCAGTTAAGAAAAAACAATCTGAACACCGATCAACGCATTACTGGCGAAGTACAGCCTGTCATTACCAAAACCGAAGCGCCTCAGAACGAACTGGAAATGGGCAACGAGCAACAGACGGTTGATGGTGAAAAACAAGATGACTATGCTCACTTACCAGAAGTATCGCGAGAACTTCAGCTTCAGCAAAACAAGAATGAAGTGGGTCGAGGGATGTGCAATTTTAGCTCATCCGACAGCAATGAGGTGAGCAGTGATGGTGATATTGATCACGAAACGACGCACCGCTTAAGGAAGAAAATTAACTACCAGAAAGGCGTTGCTCTTAGGAACCGTGCGCTTCAGTACCGCACCAGGCGAACAGAAAGTCAACAAAACGATGACCCATTACTTCTGGCGCAGAAACAGAGCCAGGTGATATCTCGCTTAACTAATCGGTTACACGAGATCCGGACAGAGAAACGAAAACTATTGACTCGCTTCGAGGTAGATGTTAGACACCGAGTGATAGCAGAAATGGAGGCCAAACACCGTATGGAACTCGAAGTGGACCAATTGTCTAAAACTCTGGACAAAGAGAAAGATGCCAAGAAAATGAATGAATGTCCTGACCTTGATGAGCCCGGTACCAGCGAATCGCCGACGGAAGATGACACATTAGTAGATGCGCCAGTATACTTCCCCACTGCAGAAGATTTCAAAGATCCCATCTCCTTCTACGAAGAGATCTATCCAATAGCGATGAAGTATGGAGTTTGTAAGGTGGTGCCCCCAGATGATTGGATGCCTACCTCGCAATTTGATAGTAAAATAAAATTTGACACTTCGGACCAGTTCATCGAGCGTCTGTTCAACCGCTGGGGACCCGCTGCAAGGGAAATCAGCGCAATCAAATTGTGTCTCCAGCAACACAGAAATTTAAATTATCTGCGACCAGCACGTGTGGACGGTGTAGAAATAGATCTGTCCAAACTGTACCACATTGTGCAACGGCTCGGCGGTCTGGGAACTGTCATGCAGAAAAATCGATGGGGCAAGGTCGCAGACGACCTTAAAATTCCCAAGACAGCCCACTTTGAGGCTAAGTTAGAAAACATTTACCTAAAATATTTGATAGCCTATGAAACTCTTACACATCAGGAGCGCCAGGCAACCATCCGAAAGGTCGAGTTGTTGTGGAGTAAAAAGAACCAAAAGCTTTTGGAACGAGCTATGAACCCGCCGCAGCGATTGCTTGGGTTAGAATCGTCAGACGACGAGACTGAGGATGAAGAAACCAAGGCTGCTCTCAATATGGCAGAAGACTGCATTGTTAAGGGTCAGGTCATGGCGCTTTGCCGCTTTAAGAAGTTGGCATCATTGACCTACGAGAACATGTTCGGGCCGGGCTCGGAGGCAGCCGCCCCGCCGCCACTAAAGCACATCGAGGAGCTGTACTGGCGCCTCGTCACGACGGGCTCGGAACACGTGTGCGTGCACACCGCGGCCATCGACACCGGCGAAGAGGGCCACGGCTTCACCACCAAAACGGAGCCGTATGCCAGCCATCCGTGGAACCCGAAGCAAGTAATCAACAATCATCGGAACGTGCTTCGCTATTTGGGTCCGGTGGTTGGCGTTACGTTGCCCACTCTGATTCTGGGCATGTTATTCTCGACCTCGTGCTGGCACAAAGATCCACATGGAGTAGCGTGGTATGAGTATCAGAGTAAGGGACCCGCCAGAATTTGGTACGGGATCCCCGCAGACCAGGAGGACAACTTCAGGAAGGCAGTAGAAACGTTAAGCCCGACGTCGTGCCAGAACAAGGGCCTGTGGCTGCCGTCGGAGGTTACGATGATTCCGCCGAGCGTCCTGCGCCAACACAACGTGCGTCTGACACGCGTGACGCAGAACGAGGGCGAGATCATTATGACCTTCCCCAACGCCTATACCAGCTGGATCAGCACCGGCTACACAGAGTCCGAGAGTGTGTACTTCGCGTCACCGGAATTTTTGGACTCCATGTCGACAGCCTTCAAGGTAACAAAACTTAGCTATGAGCCGACGATGTTCTCAATACAGCACCTGCTCTACAACATAGGCCGAGACACGGAGGCCGATCAGAACGTATTGAAACTCGCGCTGCCGCTGTTCGAAAAGATGATGAGAGAAGAAGTCACCAACCGGCAGATTCTGCAGGAGAGAGGACTTCCAATCGTACAGGAGCTCGTGACCACCACCACCGGCGTGCGCCCTCTTGATGAATGCGATTCATGCAGGGTCTCACTATTCCTCTCCAAGGTGACGGGGCTGCCCGCGCGCCAATCTGTGTTGTGCCTGGTGGACACGCTGAAGCTGCTGGAATCGATACCGTTCAAGGATACGGGCGTGATAATGCGGGTACACGTCACCGTCCTGGAGCTGAACAGGGTGTTCGACGACATGCGCCGCCGGCACCCCCAGTCTCAGCCCCCACATGTCGCGCAGTTAACCGACCCGTCATAG
Protein Sequence
MSLRSRRLSKLEMNKLLALSCVPLRKNSLKRKKASSDEDEPLIFHKTRKKRRTAAASESSPWEKSLSSKDINVRQEITEKEIQTNPVSSKHTKDNSAKKKTSAPRKSVTVVAIKEHLESAHEKLDNLVTQNDTIVPVYPVVAPVNLIEVPDALVVIPDASVLVPDAPALVRKTPVLVPDPPVLVPDAQVLVPDAQVLVPDAQVLVEDAVVTAATRPLQMSTGRDTLVVGSSNRVIVPVPFVPYEADTPEQNAEYLERLDNAMPLLDELDLSNEVNNDDESTGWEKHVQVYVHVAPDQTVMVDSQNQPSSSLYYEGSSDSDDDGEQIMRFQAPINVPVHRSTNDSPQPGPSGMQSQLRKNNLNTDQRITGEVQPVITKTEAPQNELEMGNEQQTVDGEKQDDYAHLPEVSRELQLQQNKNEVGRGMCNFSSSDSNEVSSDGDIDHETTHRLRKKINYQKGVALRNRALQYRTRRTESQQNDDPLLLAQKQSQVISRLTNRLHEIRTEKRKLLTRFEVDVRHRVIAEMEAKHRMELEVDQLSKTLDKEKDAKKMNECPDLDEPGTSESPTEDDTLVDAPVYFPTAEDFKDPISFYEEIYPIAMKYGVCKVVPPDDWMPTSQFDSKIKFDTSDQFIERLFNRWGPAAREISAIKLCLQQHRNLNYLRPARVDGVEIDLSKLYHIVQRLGGLGTVMQKNRWGKVADDLKIPKTAHFEAKLENIYLKYLIAYETLTHQERQATIRKVELLWSKKNQKLLERAMNPPQRLLGLESSDDETEDEETKAALNMAEDCIVKGQVMALCRFKKLASLTYENMFGPGSEAAAPPPLKHIEELYWRLVTTGSEHVCVHTAAIDTGEEGHGFTTKTEPYASHPWNPKQVINNHRNVLRYLGPVVGVTLPTLILGMLFSTSCWHKDPHGVAWYEYQSKGPARIWYGIPADQEDNFRKAVETLSPTSCQNKGLWLPSEVTMIPPSVLRQHNVRLTRVTQNEGEIIMTFPNAYTSWISTGYTESESVYFASPEFLDSMSTAFKVTKLSYEPTMFSIQHLLYNIGRDTEADQNVLKLALPLFEKMMREEVTNRQILQERGLPIVQELVTTTTGVRPLDECDSCRVSLFLSKVTGLPARQSVLCLVDTLKLLESIPFKDTGVIMRVHVTVLELNRVFDDMRRRHPQSQPPHVAQLTDPS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-