Msac009907.1
Basic Information
- Insect
- Melanaphis sacchari
- Gene Symbol
- SIZ1
- Assembly
- GCA_002803265.2
- Location
- NW:391274-392463[+]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.6e-22 8.4e-19 66.5 5.5 4 48 209 253 207 255 0.96
Sequence Information
- Coding Sequence
- ATGGCTATACAAGGACCAAGCCGCAAAGATGTCAAAGTCTTTTATATGAATACAGTTCCCAAACCAGTATATGAAGTAGAATTCAAACCTCTACCATTTTACagaaatgtacataaaattgttCTGCCAATGGCTATTTATTGTATCCCAAAAGTTGAACCCGAAGGTGGACAATCACAAgTATACACTccatttgattttgaatttgaattgcCAGAAATAATTCGATCaataataaacagtaataTAAAAGATCTACGATTGCAGATCCGATTTGGAGAAGAGAAGCCAGGGAAGAAATATTTGTCAGATGGATTACCGGGACCAGTACAACTACGTATTAATACGCTCACACCAATCTCAGCCCAAAAGAGccctataaattatgattgcaAATCTTTAGACGATAGaaataaaatcgtaatattGTGGCCATCATGTGAAACCCCATATTACATGATAGTAGATATTGTGGAAATCATCACGATTGAAGATTTGGTGAAACGCatacaatttaacaataaactatgttctgttaaattaaatacaaaagcTAAGGCAATAGAACTGTTGAAAAATTCAGATTCAGAAATTTTGGATTCGGGGTCCTATAAGTTCATTTTATTCTGTCCAATAACCAAATTAAGAATGAAATTACCaacaaaatctttaaaatgtagTCATTTACAATGTTTTGATCTGCATTCATTCATTGCAATGAATAAGATAAAACAAACATGGACATGCCCGATTTGTATGATTCCCATTTTAGTTGATGAATTGGTGATAGATTCATTCCTTTtggatattatcaataattcaaCTCTTCCTGAAAAATGCTTTGAAATAGCATTATATGCTAATGGTGAATGGGAACCATGTATAGAACCGAAGAAAGAAAATGAAAGCAATGGGAGCGAATCTGacgatgaatatttaaaaaataccattattCCTATGAATTCAGataattttgatgataaaaatatccgTGATGAAAAACCTATATTACCAATAACAAATAGTTGGAATTCTAATGAACCAATGTCTATCAATCAGACTACAACCATCAACGAAACAAACATTAAAGAAGAACCGGTTATTAAAAAGGAATAA
- Protein Sequence
- MAIQGPSRKDVKVFYMNTVPKPVYEVEFKPLPFYRNVHKIVLPMAIYCIPKVEPEGGQSQVYTPFDFEFELPEIIRSIINSNIKDLRLQIRFGEEKPGKKYLSDGLPGPVQLRINTLTPISAQKSPINYDCKSLDDRNKIVILWPSCETPYYMIVDIVEIITIEDLVKRIQFNNKLCSVKLNTKAKAIELLKNSDSEILDSGSYKFILFCPITKLRMKLPTKSLKCSHLQCFDLHSFIAMNKIKQTWTCPICMIPILVDELVIDSFLLDIINNSTLPEKCFEIALYANGEWEPCIEPKKENESNGSESDDEYLKNTIIPMNSDNFDDKNIRDEKPILPITNSWNSNEPMSINQTTTINETNIKEEPVIKKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -