Msac002987.1
Basic Information
- Insect
- Melanaphis sacchari
- Gene Symbol
- ARID4B
- Assembly
- GCA_002803265.2
- Location
- NW:459928-484309[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.1e-23 6e-20 70.8 0.6 1 89 197 280 197 280 0.93
Sequence Information
- Coding Sequence
- ATGTTTGGTGATAGAGAAAAATATTGCTCAGATAGAACattatcatgttttaaaaGTAGAAGACACTTACCTACTAATGATACTCTTGATCAATTTCCGCTTAACAATCCAGAACACAGTGGTATAACTCATGTATTACAAAATCGTAGAAgtcaagaatttaaaaaagattttggGGAAAGTAGGGAAGAAGAAGCCTtagcaattgaaaaaaaagatattggaAAAGTAATTTGTGtagtaactaatattaaaaagaaagtaAGGGATAATTGGTTTCCTGGTTTGATAGTCGCACCCACTTCACAATCCTcagttaaaactaattttatagaaaaccaTCTAGTTCGTTCATTTAAGGATGGAAAATActaTACAGtatcaaaaaaagaaataactgAATATACAAAAGAAATTGGTACTAAAGTGGAAAATCCTACGCTtaaaattgcggTCAAAAAAGCCAATTTCTATCTTGACAATGATGAACTTCCGCCACACTGGGATCgagattttttatttggtgTTGACAAAATTTGTACTGCTACTAATGATTGCAATaattttgatgAAGAAGAATCAATTGAAgaaaaagattattttgttgcacagttatttaaatttatggatGATCGAGAAACTCCTCTTAATCAAACTCCAATGATTAATGAAAAGgatgttgatttatttaaattatttaagattgtcAATAATTGTGGAGGATACAACAAAGTTGATAGATGTAATCAATGGGTTTATGTATCAGTTAAAGCTGGTCACGAAcaacaatcatttttatctGTCAAACATTTCTATCAAaaatatttatatagttttgagaatttttatcgaaaactAGGCTGTACAATGTTAAATCATAAAAGAAAAGCAAGATCACGCAACAGTTTTAGTCGCAGTATTATAAGAGATATTGATAAAGCATTACCTAGCACATCatctattattgataaaagtaattctgcaaaaaataaattaaacaataaaaagaaaaaagattcCACAGGAACTAAAGAAgtagttaaaactattaaagttGAAGAAATATGTCAAAAGAGTAATGGAGAAACTTCAAAAAAAGATGAAattagcaataaaatattacataaaaaaaaatcagtgacATGGGATCCAAacataatagaaattaaaaattctgttaaaaattttaaaattaaaaaagaattaaaagaaattgatACTGACATACTAGATGATGTACAAATCGTTGAAGATAAAACagtagaaaaagaaaaaattgcaataataaaatctgaaaatattgaattactaAATACGAGTGAAAGTAAAGCTGATGAAGTACaaactaaaacttttttaaatataactgtattcaaaaattcaaagagAGGaggattgtatttttttaagccaGACATTTCAAGTGAAAGAAAATTCAGTGGAGTaccaaaaGCcactaaaaaaaagaagaatattAGAAAGAAGACttcaaagaataatattatagttgttaatgTCAAAGttgaaacatttaatgaaaactcAACAGTGGTTGTTGGAGACGATTTATTAGTGTACTATAATCAATACGAATTTTATGAAGCAAAAgttcttaaaatttataataattatggagtaatgaaatattacatacattatataggaTGGACTTTACGTTACAATGAGTGGATTGACATATCAAgaattgaattcaaaattataggtTTTACAGAAGAATTAGAAGGTCATAACAACATAGATTCATCTAAGATTAGTCTTCCAGAACAAACAAATTTGGACTCAAAAAAGGTTCTATCAACATCTAGTAGAACTAGAAGATCAGCAGTTATtccaataaaatcatattcacTAAGAACAAAAACACCTTACGATAGAACTCGACCTACTAGAGCATGTACTTTGAGTAAccaaccattttttcatattttagataattatgaTTCAGAAACCGAATACTCAGAAAGAACTGTAGAATCATTCAAGCAATatagtaagaaaaaaacaatcaaaaatgaACCTGATGTAGTCATAAAACCAAAgcctttaaaaactaataatcaaaaaaaaaatttgtgtttaaaaacatccctaaataaaaatatgttcttgCAAAGAAATTTGTCTAGCAAACCAAAGTTATCTGGGTTTAAAATTTGTGATAATAAATCTGAAGAAATCAAGATTCGTGAACAAGATACATTAAAACCATtacttgatttaaattttatgattccaTCACAAAATTATAGTGCAAAATCAAATGCAGATAATGAAAATGTAGAAGTACAGTATGAAAGTAAAATTTCTGATGTTACTATATTTGAACCAAAAATTACTCCAAATCATTTGTTTCTTGAAGATAATGTTAGAAAAAATCTAGATAAAATGTCTGAATCCtcaaaaaatctaaatgaaGAAATCAGAATTAATGCCAAGCGATTGACggtgacaaaaaaattaaaaaattttaacaccaTATACTACTCGTCGTCCTCTGAAGTTGAAGAACaaaatgagtttaaaaaagtaaCCAAAGTCATCTCTTCTTCGTTGGATGATAAATCTGATAAGTCTAGAATATCTGGacctgatttttatttaaacaaaataagatCAGATATGAAAGAACCTATGCTAATTTcaacaaatagtaataatgataacatcAAAAAAACCAACAACTTGAATCAACAATTAAAGATTAAAGTTTCAAAAAGTTATGAACCAATCACAGatgtttatgaatataaagaaTCTGAATCATGtaattttgatgatatttCTTCTGATATTGATTCCTCAAAATTGTCGAACTCAGAGAAACTTGATGAATTGCCTAAAGTTATACATTCTTCAGCGCAAGTGGaagtgattaataaaaataaatctacagTACCATTTTTTCCTATTCTCTATAGTATGGAttcatttgataataaaattgggATAAAAATCAATGAGAATTTGaaccatattaataaaatccatGATTCAAATGCTCATAACGAATCTGATtatatttatgataacgaTGACGATGATGACGATGATGACGATGAGGATGAATCAAGATTGGTGATAGTGGAAGATCCTGATTATGAAAGTGATGAAAACATACAAGCACAATCCCTGTCACCACTACCATCAAGTATACATCCTAATGAATTAGAGTTCAAAAGTTTatatccaattaaaaaaaataacacttcaCTGGTAGATACAGATGACGAAAGTATACGAAATGATCTTATTACTAGTGTTCAAATGTCTTCATACTCTAAAAGTTATGGTTATGAAGTTGATAAATCTATGGTGCTACCAGAATTACAATTTAGAGAAAAAATGGtagataaaaatgttctaGATAACACTTTAGTTATAGAGAACAATCATTATGTTGCAGAATATGACATTTATAAACCTAGTACTAGTAAAGGTTTATTTCATTCAATAAGTCAACCCAGTACTAGTAAGGATGGTTGCTATGAAACTAGTACTAGTGGtgatgcaaaaaataaatcttttgtaGCTAAACAAGCtttcaataatatgatttttgacACTAACATTCCTTGCAAAAGTAATTTACTTAATCACAACATTCCAAGTactaatgaatacaatttttatgaaaactctATACCTAGTACTAGTAAACAATTCTATAATCCAGAAGCTGATGTAAATAGCATACCATTTTATGAAGAAACCATACCAGATAGTTCAGCTAGTAAACTAGCAGAGCAATATGAACAAGAGAATACAATCAGGATATTtggaaaattcaataataatgaaatagaaGCTATTTTAGGCATGTGTGCTATGTCTCAAACTTGTCATATGCCAATGGTTATTACAgcaaatgttattgaaaaaaaaacagaagaaAACACTAATACTcatcaaaaTGAGAATCTAAGACCTACAAAAAATCATGGTACAAATATGAATGAACCTTCAGTCACAGGAATAGTAAAGCTATCAGAAAAATCACTATTCAAACGCAGTACAAGTAACAGTCCTAAGCAATCATCAAAACGTCAAAAATCATCTTCTGCTACTGCatctaatcatttttaa
- Protein Sequence
- MFGDREKYCSDRTLSCFKSRRHLPTNDTLDQFPLNNPEHSGITHVLQNRRSQEFKKDFGESREEEALAIEKKDIGKVICVVTNIKKKVRDNWFPGLIVAPTSQSSVKTNFIENHLVRSFKDGKYYTVSKKEITEYTKEIGTKVENPTLKIAVKKANFYLDNDELPPHWDRDFLFGVDKICTATNDCNNFDEEESIEEKDYFVAQLFKFMDDRETPLNQTPMINEKDVDLFKLFKIVNNCGGYNKVDRCNQWVYVSVKAGHEQQSFLSVKHFYQKYLYSFENFYRKLGCTMLNHKRKARSRNSFSRSIIRDIDKALPSTSSIIDKSNSAKNKLNNKKKKDSTGTKEVVKTIKVEEICQKSNGETSKKDEISNKILHKKKSVTWDPNIIEIKNSVKNFKIKKELKEIDTDILDDVQIVEDKTVEKEKIAIIKSENIELLNTSESKADEVQTKTFLNITVFKNSKRGGLYFFKPDISSERKFSGVPKATKKKKNIRKKTSKNNIIVVNVKVETFNENSTVVVGDDLLVYYNQYEFYEAKVLKIYNNYGVMKYYIHYIGWTLRYNEWIDISRIEFKIIGFTEELEGHNNIDSSKISLPEQTNLDSKKVLSTSSRTRRSAVIPIKSYSLRTKTPYDRTRPTRACTLSNQPFFHILDNYDSETEYSERTVESFKQYSKKKTIKNEPDVVIKPKPLKTNNQKKNLCLKTSLNKNMFLQRNLSSKPKLSGFKICDNKSEEIKIREQDTLKPLLDLNFMIPSQNYSAKSNADNENVEVQYESKISDVTIFEPKITPNHLFLEDNVRKNLDKMSESSKNLNEEIRINAKRLTVTKKLKNFNTIYYSSSSEVEEQNEFKKVTKVISSSLDDKSDKSRISGPDFYLNKIRSDMKEPMLISTNSNNDNIKKTNNLNQQLKIKVSKSYEPITDVYEYKESESCNFDDISSDIDSSKLSNSEKLDELPKVIHSSAQVEVINKNKSTVPFFPILYSMDSFDNKIGIKINENLNHINKIHDSNAHNESDYIYDNDDDDDDDDDEDESRLVIVEDPDYESDENIQAQSLSPLPSSIHPNELEFKSLYPIKKNNTSLVDTDDESIRNDLITSVQMSSYSKSYGYEVDKSMVLPELQFREKMVDKNVLDNTLVIENNHYVAEYDIYKPSTSKGLFHSISQPSTSKDGCYETSTSGDAKNKSFVAKQAFNNMIFDTNIPCKSNLLNHNIPSTNEYNFYENSIPSTSKQFYNPEADVNSIPFYEETIPDSSASKLAEQYEQENTIRIFGKFNNNEIEAILGMCAMSQTCHMPMVITANVIEKKTEENTNTHQNENLRPTKNHGTNMNEPSVTGIVKLSEKSLFKRSTSNSPKQSSKRQKSSSATASNHF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -