Mpla021011.1
Basic Information
- Insect
- Meiosimyza platycephala
- Gene Symbol
- ZFY
- Assembly
- GCA_963662105.1
- Location
- OY759210.1:76389905-76395014[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.3 29 6.2 2.9 3 22 489 508 487 511 0.91 2 11 0.00095 0.091 14.1 0.5 3 23 534 555 532 555 0.94 3 11 0.0024 0.23 12.8 0.1 1 23 572 595 572 595 0.95 4 11 0.067 6.4 8.2 1.8 1 23 600 624 600 624 0.93 5 11 1.7 1.6e+02 3.8 0.2 2 23 657 678 657 678 0.94 6 11 9.4e-05 0.009 17.2 0.6 2 23 711 733 710 733 0.94 7 11 0.25 24 6.4 0.1 1 21 738 758 738 759 0.91 8 11 0.26 24 6.4 0.7 2 23 799 820 798 820 0.92 9 11 0.066 6.4 8.3 3.3 3 23 833 852 831 852 0.92 10 11 0.00079 0.075 14.3 2.4 1 23 858 881 858 881 0.95 11 11 0.12 11 7.5 1.4 1 12 912 923 912 924 0.90
Sequence Information
- Coding Sequence
- ATGATTGATCCTGATTTGGATGATACCCACCTCTGCATCAAATGCAATGCGACTATCGTTGGACTTGAGAACTACATACAACATCGTAAACATGGTTGCAATATCGCTAATACTACACATGTTCCTCCCAAAACTCAATCAACAATACAGTCGGTTGAGTCTTCACATGAAGATGCGTCCGGAATTATAGCTAGTGGAAGCAACCTTAATCACAGTTACGCGTCGTTTGAATTTACTGAACCTGAACCACCGTCAACTTATGTGAACAAATCAGAACACGGCGGTAAAACATCAAAATCACTAAGCGACCCATATGATCTGCCTTATGAACTGGGAGCCGATGTATTTTTCTCCTCGCTACAACTACAGAGCGTTCAATCTACGGTACCATCAACTGGTGGAAAAACTAGTACAGTACAGCAGCAGTTGCAACGACAAAAATCTCAACAAGAACACACCGAAGTAGCCTGGATTGAGACAACCGCCAGCACTAGCGGTCAACATAGCACGGAGAACTTAATGAAGGCTGTGAGTGATATAAGCGAGAGTAAAAAACCATACGAAGGTATTTTCAAAACCATAACCTTTGCACATGAATCACCGGATGCCACTGAAGATGAGGAAGAGGAAGAAGTCGACGTGGAAATAGATGATGAAGAAGACGAAGTATATGATCCGATCGCAGCATCTCATGCTACCGGTGGCAAATGGAAACTACCGATGATGCGGCATTCGCCACCCGTTGTGCCGATTACACACACAGGTGGCAAATGGAAGCCAGAAAACCGTCCAAATCTCCGTGTAACCCACACACAACTAACGTGCCTCTCACCTAACTGGGAAGATCCAGCAGAAGAGGCAGAGCCATTAGATCAAGGCGAAAGTGAACATCCACCTGCTGGGCACACCAAAGGCAAATGGATACCAGGCACAAAATTGCAACGTTTGGAATACAAAGAAGaagtggaattgaaaaaatcatcAGCTTCACAAGATTACTGGTGCAATATCTGCTGTCGTAAGCTAAAGAACAAACACATTTACGAGAGTCATTTAAAAACATCATATCATCTTAAGCGTGCGGAGCCAGAACAACAGTTGGAGAAAGCCACCCTGGGTGATATTGATAAGAGTTTTTCTATAGAGGAGTTAAAGGTAACACAGGTATCACCGCTCAAGAAGCGCAAGCGTCGTGCCACCTTTGTCAAATGTGAGCTCTGCAAGCATTTGGTGTCACGTCACTTGATCGGCAAACATCTTATTTCACATTATCACTATCGACGTTTGCAACTAAATCCTGGTAAATCATTTCGTATGATACTCGAAAACATACACTCGATAGTCCTACAATCGCCATTTCAATGCCGGCCATGTTGCTTCTACGCTAATACCGAAGAAACCTTCTTAAAACATTGGAACTCGTCACAGCATCTTGATGCTTCTGAAGGACCCGGCAAATTTTGGTGCAGCTATTGTCATTTTGAATGTGAAGACAATAATCAGATGCGACGTCATTTACTTAGCGCAGAGCATAAGGAGGTCATCTTAGCGATAAATCGTTCTGTACCCATATGCATCACAAAGAAGATAAGTATTGATTGTCCCAAATGTCGTTTATCATTTCGTTATAACCTTGAATTACGCAAACATATTGAGCAGTCTCATCCAGAGGGAGTTGCTAGTGGTACAGCTTCGGACACATATCAGAGTCGTTTCGTTTGTGAAGTTTGCTCTGAGGTATTACgttcaaaaattgcattacaaCGTCATgagaaaaatttgcattttctttcGAAGTATTTTTGTGCTATATGCAATTTAGAATTTGACACACCTTGTAAGGCAAGAAGACACCGAAAAACGCTGGAACATCGCTTGCATGCTGCGTCTACAGAAAAACGAACGATACGGCATCGTGTAATGCTCAAAAAGAAAGTGGGCGCAAAGAGCTTACATGGCAGTTCCAGGCAGTGCAACAAATGTGATTTTATTTCTTCATCTGAAGTTGAAGCAATGCTGCATGAACTAACACATCCCAATGTAGAACTTCTTAAGGTCAGTGAAACCAATGTTGAAAACAATCTAAGGATAGAGTCTTCAAAATCGAATGCAAACAagacaattttaataaaatgtaaagaTTGTGAGCAAACCTTTAACAGTCTAAACGAGCTAAAGAAACATCGTGACGTAGCACATCCACTACTAAGTCACGTCTGCCTGAGTTGTGGCGAAAGTTTTGCATTAGCGCAGGCACTAGGACGTCACAGTAGGAACTGTCAACCATCAACCTCAGCAGCAGCtgccaaaattttttcagcagaaACCGAACCGAAAGCGGAAGATATTGAAGAATCTAAGTCCCGAGATACTACCAGTGATGAGAAATCATGGAAATGCAGTGACTGTAAATTCAgcaCTTCGTATGAATCAGAGCTAATATTCCATCGTTTGCTTCATACGTTGGGGCCCGTAGGTAAAAATCAACTGATCGATTGTCCACTATGTTCAAAGTCATTCCGCAAGCAGTCATTGCGTTGTCACTTACGCCAGCATACCAATGAGAAAATTTTTGCCTgcgaattttgtaatttaaaattttcacgaCTTCACAATATGAAGAGTCACATTAACCTGTTGCATTTGCAACcacaaaaaaaggaaacattttCTGAAGAAACTGCCGTCGTTGCTCCTGAGAAAGCTGAAGAAAAGCCCATTGAGCAACCTGCTTATCAATGTGACACTTGTGGCAAAGTTTACCGGAAAAAGTAA
- Protein Sequence
- MIDPDLDDTHLCIKCNATIVGLENYIQHRKHGCNIANTTHVPPKTQSTIQSVESSHEDASGIIASGSNLNHSYASFEFTEPEPPSTYVNKSEHGGKTSKSLSDPYDLPYELGADVFFSSLQLQSVQSTVPSTGGKTSTVQQQLQRQKSQQEHTEVAWIETTASTSGQHSTENLMKAVSDISESKKPYEGIFKTITFAHESPDATEDEEEEEVDVEIDDEEDEVYDPIAASHATGGKWKLPMMRHSPPVVPITHTGGKWKPENRPNLRVTHTQLTCLSPNWEDPAEEAEPLDQGESEHPPAGHTKGKWIPGTKLQRLEYKEEVELKKSSASQDYWCNICCRKLKNKHIYESHLKTSYHLKRAEPEQQLEKATLGDIDKSFSIEELKVTQVSPLKKRKRRATFVKCELCKHLVSRHLIGKHLISHYHYRRLQLNPGKSFRMILENIHSIVLQSPFQCRPCCFYANTEETFLKHWNSSQHLDASEGPGKFWCSYCHFECEDNNQMRRHLLSAEHKEVILAINRSVPICITKKISIDCPKCRLSFRYNLELRKHIEQSHPEGVASGTASDTYQSRFVCEVCSEVLRSKIALQRHEKNLHFLSKYFCAICNLEFDTPCKARRHRKTLEHRLHAASTEKRTIRHRVMLKKKVGAKSLHGSSRQCNKCDFISSSEVEAMLHELTHPNVELLKVSETNVENNLRIESSKSNANKTILIKCKDCEQTFNSLNELKKHRDVAHPLLSHVCLSCGESFALAQALGRHSRNCQPSTSAAAAKIFSAETEPKAEDIEESKSRDTTSDEKSWKCSDCKFSTSYESELIFHRLLHTLGPVGKNQLIDCPLCSKSFRKQSLRCHLRQHTNEKIFACEFCNLKFSRLHNMKSHINLLHLQPQKKETFSEETAVVAPEKAEEKPIEQPAYQCDTCGKVYRKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00258452;
- 90% Identity
- -
- 80% Identity
- -