Basic Information

Insect: Meiosimyza platycephala
Gene Symbol: -
Assembly: GCA_963662105.1
Location: OY759209.1:9888253-9905691[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.11 10 7.6 0.2 1 23 2111 2134 2111 2134 0.93

2 8 0.00092 0.088 14.1 0.5 1 23 2139 2162 2139 2162 0.97

3 8 0.04 3.9 8.9 3.0 1 23 2338 2361 2338 2361 0.95

4 8 5.3e-05 0.0051 18.0 1.2 1 23 2369 2391 2369 2391 0.98

5 8 0.00014 0.014 16.7 0.3 1 23 2398 2421 2398 2421 0.97

6 8 0.00045 0.043 15.1 1.8 1 23 2427 2449 2427 2449 0.96

7 8 0.017 1.7 10.1 2.0 3 23 2456 2476 2455 2476 0.98

8 8 0.0051 0.49 11.7 2.2 1 23 2482 2504 2482 2504 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.11	10	7.6	0.2	1	23	2111	2134	2111	2134	0.93
2	8	0.00092	0.088	14.1	0.5	1	23	2139	2162	2139	2162	0.97
3	8	0.04	3.9	8.9	3.0	1	23	2338	2361	2338	2361	0.95
4	8	5.3e-05	0.0051	18.0	1.2	1	23	2369	2391	2369	2391	0.98
5	8	0.00014	0.014	16.7	0.3	1	23	2398	2421	2398	2421	0.97
6	8	0.00045	0.043	15.1	1.8	1	23	2427	2449	2427	2449	0.96
7	8	0.017	1.7	10.1	2.0	3	23	2456	2476	2455	2476	0.98
8	8	0.0051	0.49	11.7	2.2	1	23	2482	2504	2482	2504	0.99

Sequence Information

Coding Sequence: ATGGATGTTGTTGGAGTAggagctgttgctgctgctgtcgctgCTAATGTCGATGCTATCACCACAATAAGCTGCTGTGACACAAGTGGTGCGACGGCTGCGCCTACGCCCAGCTCTACAACATGTGTATTATCAACGTCATCGACGACCCTACCGCCGCCGCCGCTATTATCAGAGGTGGCGGTAGTAGGATCTGAAAAGATTTCATTGCCCTGGGATTTTGCAGCAACAGAACTATGTCGCAGCTGTGGTAGACCTCAAACCGAGCTATATGAACTTTTCGATAATCAACGTAGTCATGATATTGATGAAACAAACCAGAATGAAGAACCAAGTGTGTCACTTAATAATAGCAATGAAGTAATTGAAGatcaacacaaaattaaaatggacATTTTGCAGGAAATGCAAATTTGGCAGCTAAGGTCAATTTCATATTCATCCTGTGAAAATAATCAACTGAAGTCTGGCGACAATCACTGGAGTAGAACCCACAAGGTAGCCGCTAACGCGGTCGTCGTAAAACATCGTGAAAATGATGGCAAGAACAAGAAATGCGTGGATCGGAAAATATTAGGTGAAATGAAGGCACTCACTTCTATAAAACAAGATGATGGATATCCACAGCGTATTTGTCGTAAATGTAGAACACAATTCCTATTGATTGGCAAATTTCGCCGAAAATGCCGTAAAGTACAAATACGTCTTCGAGAACTAAATGAGGAATGTCGATTGGAGGAGgaacaacaattattaaaacGTCTAGATGAAAAAGAAATCTTGGATATCCCACCAGTTCTAGATATTGGTCACGATTTAATAAACGACAACTATGGGCAGCCATTAAGCGAGGTTGAGCTATTTGAAACAAATTGGAATGCAACAGAAACAACACAGAATGAATCATTAACAAAAGAATTAATGGCAAACGATACAGACAAGGACGTGCGTGACGATGATGAGTTAAGAACAGCTGAAGCAGAGAATATCACAATCGGTTGTCGTGTGCTGCATGACATAGATCTTGAAGTTAAAGCTAACATCGATGAAGAATCATTACTAGATAcaaattctttatttaatacCAACATTGATAAGGAAAGTTTAAAAGGCAATGAAATGCATTCTCAAGAAAGAGCACAGATTCTTGATAATGTGacattggaaaaaaatattaatacgaATTTAGTCAAAAATATTGCTGACGAATACACAACTGGAAATTTAAATTGCAGCTACTATGTTGAAAATACTATGGATATGTTAGCATCAAACCAAAGAAATGAattttccatttcagaaaatgATAATAATCTCACCAAGAATGCGGTTGAgataatttcaattgaaaatttgggTAAGATTGACTTAGTACCAATAATATCATGTGGCGAAGAAGTAAACGATTTGAGAATattaaccaaaaatataaatgatattGCTGAACTTAAACATGACAAAAAAGAAGACTACCACACCACTGTCGATAATGGCAAGGAAAAAGACTGTGTTATGCCAGAAGTAAAAGGCAATAACGACAAAGTTCGAAATAAGAATGAGTTGGAAAATGCGTTGACTGAAACCGGCAATATTGAGGGCTTAtctaagcaacaacaaaaaccagaACCACTAGAAACTGGAAATAACGAAATCGtattaaatgataaaaatatacttataaaGGAAACAAAATCAGAATTAGGGACACCACATGATTGTtgtttaaaacaaattgttgaATTGAGAAAATCAAATAGAAGGCATTCAGATACTACGTTCGTAACAAAAGCAGCTCTCAAGGCATATGATTCTCATTCAAGCAgcttaaaaatgaatgaaaaaatgtcTTCATCGGACAAGAGCTTAATCGATAAGAATGAACAACTAGATGTGAAAGCATCGATATCAACAACAATTGATGTGGAGAATATAAGTGAGGTCCAAACAGCAGCGGCTGTTAAAGAAAGCAAATTAACCAATGCAACAAATGATAAACCTATGCATGATAATCCAAAGCCCACTTTGATTATACCATATGCACAAAAGCGACGAAAGAAGTCAGCATTAAAAATGGAAGGTGATACATCATTTAAGCAAATGCATGATGTGGAAATGGAAAGCACGCATACCGATAGCTGTGCAGCTAAAACACGTGAATGTAGTGTACGTATCTGTAGATTAAATTCTAGTAAGCTAAACAGTTTCGTGCACAATAGCACAAGTGATATTAGCACAACCGAAGTTGCATCTCCTCAACTGACTgcagtaagaaaaaaaagaaaaaattcgaaTGCCGAGCACAATGATCatgaaattataataaaaacacaagACACAGAAACAGAAGAACTTGATACTGCAACCGTTGCAAATAAGATACTAAAAATGGAAAGTAAAAGTACACCTAAAAAAAGATTATCATGGAAAACCAAGGCAGAGATGAAAGCAACAATCGATGtcgtaaaattgagaaaaacatcCTTGCGCCATCAtgcaaaaactaaaactaaattgCAGGAAACTGACACAATGATGGTTACATCAATTCCAGATAGTAATAAAGTAGAGGACCAcgcaaaagaaacaaatttgaaGCAAGTACCTAATGTAGGTGTAGAGCAGTCAATGAtcggaaataaaattattaccgATCAAGCAGATGTTGTTGGTAATAAAAATATGGACATTGTTTCAGTCCCTACAACTGTGGTGTCGAAAgaggaaaataaacaaaatcaagcaaagcaacagttgaaaaatttcatattgcGTAGAAGGAGACACGAACGTTCCAGTTTCCAGAGAGAAAGAGATTGTACAAATACTACTCCTGTTgtaaataaaatagcaaagaaAAAACTCAAATCTACCGttgataaaaaagtttcaaattgtAAAAATGACAGCAATGATCCCATAGAAATTAATCTGCAAAATACATTACCTTCGGATGGTGAAAAAGAATCTACTAGAACAGAGCCGGTCCCAGTTTCCGAAAAGCAACAGCCGAAATCTCTAAATTTACGTAGAAAACAAGTAATGCAAGTAAAGCGATGGCGTTTAGGCTTACGGAAAGCAAAAGATGgtaattttatcaaaagtaaAGACGTTGAAACAAAAGAGTACAATGCAACTGAAGATAAAGAGAAAGAAATTGTATGTTCCACTACCAAACTTGTATCGACAGCGATCGATGAGGTGTCATCGTCTCAAAAACTTACTGAGCTCGAAAAAGATGTTGAGCAGGCCACCACATCCCAAGAGCACAATGCAATTGAGAATAAagagaaagaaattttttgtttttcaaccaACCTTCAATCGACAGCGATCGATGACTCGGTGTCATCGTCTCAAAAACTTACtgaggtaaaaaaaattgtgaagcaGGCCACAACATACCAAGGACAGCAGCTAAAATCAAGGAGTTTGCGTAGAAGAAAAGTAGAACAAATGGCTCGCAGGCGCCCTAGTTTCCTGAGGACAATTCAATGTACAAAAGCAATTCCAGTTAAAGGTGTATTTCAAAAACAACTAGGCGAAGTAGATCGCAATGAAGCAAAAAACAAAGATAAGGAATctatttgtaaagaaaaaaacagtCATTCCGTAGCAACCGATATACAAGTCTCAATGCcccaacaatttgacgaaaccgTCTGGATTTCTCAAGAAGTTTTAGAGCAACTGCCAATACCCCAAGAAACTACTGAGCAGCTTACTACTGAGCAATCGCCTCAAGAAGTATCCGAAACTGTTGAAGAACCAACATCAAGTTCGCAATCAGCTAATCAAAATATATCACTTGACAAATTACAAGTTAGCGACTTAAACGCAGACGTCGAAACTGCACAGAATAATGCAGTTGCGGATGAGATGTCGACAGAAGATATTAATACGACTGTAGATCATGAACAAACACAAAATCTATTGGAAACCAATAAACTTATTGTCAGAGTGCCACTAACAGCATTGACAGAAGAATTTCAAAGGATGCATTTTTTTACCACAAACGTACAGAATAATGCCGAAAATTTTATTGGGGCAAAAGAAACTGCCAATGTTCCTCCTAAATCAAGCTTCGCTGCTTGGAATCAAAATGAAACTGAAAATACTGCACATGCTCTCATAAAGTCAAATTTTTGTGAGAGTGCTGCAGCGGAATGCTCTGAAAGCGCTGGAGCACTTATAACCTACATTTCAATAAGAGCAACAAATTTAACTGGTGAAGATGATGTACAAAATCCAAACACTACAGTATGTAGCCAAAACGAAAGTGATCTTAGTGAATTTTATGGATTTTCAAGCGAAACAGATCATTCATTCGAAATTAACTCGGTGGGAAAAGATGATGAAGAAAATGAGACTGGAACCGAAAATGTTGTTTTAGTGTCCTCGCAAATTACTGAttatattaatgattttcaaacaaattgcTTGACAAGTAACGATGTTGATGACAAATCCAATACATTTCCATACGACGAAACAAACGATGTAAATACGTCTTCCGAATTAAAAGATGAGCAAAATTTAACCATGGCACAAATTCAAACAGTACGTGATATCAATACACATTTGTCTTCCAATGTATCAGAAAACGATGTGGAAAGCACGCTCAACggtattttaaatgaaatacaagATCAACATATATTTTCCTCCAATACAACACTAGTAACCTTAGAATCTGAAGATTATCATAATCATTCCGCATATTCTCCACTCTCTGATGAAACGTCCGAACTACAAATAAGTCAAAATGACTTCTTAgtgaaaactatgaaaaatacTCTTTGCGATTCAGCTGATTCAACAGGTCCTGTAGTTGATCCACGTCAGGTTGAAGGTAACACTGAAGTAAATCATCCGATAATATCAGACGCATATGCAACACACTTTTCCAAGTTTGTGGAATGTTTCACCGAAGATAGCACACAATCAGAATTGATAGGTTTTCAAAATGACATACCCTGTTTTGAGAATATCGAAATGAACAGTAGTACACCCCGGCATAATCTTGTGACACCACCATTACAAATGCTCAGTCAGTCGTCCATAACAGCATCATCATCAACTCCATTAAGAATAACAAACAGTGCTTTACAAGGGGCAATACAGCATGGTAAAAATCTAGAGATCTCATTCAAAAATTCCGAAGGCAATGTGCAATACCTTGGAATTACAACTAGCGAATGCGACATGGCTGATACTATGGGTCTTGTATGCTCCACAAGTAGTGGTGCACAAATGCATACGCCTAGCTTGAATAATAGCTCTAGTCAAACGGTAAGTGCCACATTTGTCAATGAACAACAAGCAAATCAAATTGGCAAAGAGTATACAGTTAACAACGCTACAATGCATCTTTCACAGCTTTTTACAGAGATGCATCACCCCCAAGTGAAAGTGAGTCGTACTCAAGATGCAAATATTGCAAGTGGTTCCTCCCAGGACCTAACAGCCATATTGCTGCCTGATAAGAAGAAGCAAACCATTATTCCCCCTATTCGAAGCACTAAAAACTCAGTGCTATCAAAGTTTGTGGGTTCATCTAAGCGTCTTGTTTATTCAAAGACAGCAGAAGCTGCTGGTGCGGGAAATGCAAtgttacaaacaaaaaagaagctGCAGTTTGTTACATTACCGAATGATGGGCAATCAACTAGTAGTAATGCAGTCACCGTGTCTGCACCAACAGAAATTGGAACGCTTAACATTGCGAACACAAACTTGTGCACTTATGCTGAAATGTTACAGGATGTTCAATGGCAAAATAATGCACAAGATCAACAGACTACATATTACATAAATGCCTCCGACTTGCAACAATCGAATCTCATTTCAGCACTTGTTAGTGGTAATATTTCCTTGGTGTCATCGCAAATATCAACGACTGGAGCACCTCAATCAACAACATCTATAATTCGAACGCAAGAAGTCCATGAATCCAATAAACAATCTGTCGATGCCAATGAAAACTACATTGAAGGCATGCAAAATCAATCGATAATGATTGTTTTCCCACAAGAGTTATTCAAAGATTCAACAACTTTAGCTCCAGTTTCCACAGATTATAATTCCAGTCAGAATATCACAACTTTACCAGTATTAAATGCTACTTCTGCACAATCGAATGTTGTTGTTAACACACCGTCAACCGTCAACAGTCTATCAACTTCCGTCCCACCTTTATCCTCCTCGAATGTTGCTGAACAGGTGCAATCATCAGTCAATCTAACTTGTCGTTTTTGTCACAAGCGCCCGAAATTTACCAATAATCTGGAATATAGCAACCATATTATAGCTACACATCCCGCTGAGAATCCATATAATTGTCCATTGTGTCCGATGTTTTTCATGCGTCGTGTTCAACGTCAGCAGCATGTTTTGGAAGCGCACGGCTCTCATCGTTTTCAGTGTGCGCAATGTGGTCAAAGCTTTTCTATGCAGCGTGCACTGGATTTGCATTTGCAACGTTTTCATGTACCGGATGCTCCACAACAAAATTTACCAAAACCTCGGAGGAAACGAATGACGCGAGatcaaaagcagcagcagcagcagcatcaaatATTGAATGCTACGCCCTCGTGTTCGTCACAACAGcagcaaattcaaaaattatcagcAGCACAATCACATATTAATCCAACATCAACTTGGCAGGATAACGCAAGTGTTCAAGTTAATTTGGAGGATGTGCATTTACAAGTGACAGACGATGATAGAACAATCAATGAAGCGGACAATGTTCGGACAACACACAATTTGAATACACCACCACATCGCATACTCGGATGTCCAGAGTGTGATGACTctTTTGATGATATAGCAGATGCAGAATCACATGTACATCAAGAACATTCACATTCGCCAATAGCTACAATGCCATCACCAGAACAAACAGAGCCTGATTCAACATCCACAACGACACTGCGACAATTTCGTAAGCAGCGGTTATCCTCAAAATCTTTCGATGATACACCGGAACGCATTTTGCGTAGCAGTCACAATTGTATGTTTTGCGAAGAGCGATTCACCAATGAAATTGCACTAAGGAAACATCATCAAATGGCGCACAATAATGAATCTGCATTACCGTTTGTTTGTTCGATGTGCAAGCGTGGATTTCGCATGCGCACAGCACTGCAACGACACATGGATACACATGACAGCGAAGGGCGTCCATATGAATGTAATGTGTGTCGCGTCCGATTTCCAAGGCCGTCACAATTGACTTTGCACAAATTGACGGTACATTTCTTAAAGAAACCGCATACTTGCAATTTATGTGGCAAGCAATTTGGAACGGAGAGCGCTTTAAAGACTCATGCAAAATTTCACGGAGAAAAGCTAGTAGATTGTAGCAAGtgcgataaaaaatttttcttagttAAAGACTTTCGTAAGCATTGGCGCATTCACACCAGAGAACTATTTTACAAATGTGATATTTGCCCGAAATCATTTTTGCATTATACACGCCTTAGTGCGCACGTTAAAACACATATACCCCTTGGCGTTTACATCGAGGAGGATCCACCAGTACTTATTAGGGAACAAAAAAAGCTACAGCAGCAACCTACTGTAGAACAGTCGGCAACTGAAAATTTGAATAGCTCAGCTGTTGATAATCCTCAAACTAGTTCATAA
Protein Sequence: MDVVGVGAVAAAVAANVDAITTISCCDTSGATAAPTPSSTTCVLSTSSTTLPPPPLLSEVAVVGSEKISLPWDFAATELCRSCGRPQTELYELFDNQRSHDIDETNQNEEPSVSLNNSNEVIEDQHKIKMDILQEMQIWQLRSISYSSCENNQLKSGDNHWSRTHKVAANAVVVKHRENDGKNKKCVDRKILGEMKALTSIKQDDGYPQRICRKCRTQFLLIGKFRRKCRKVQIRLRELNEECRLEEEQQLLKRLDEKEILDIPPVLDIGHDLINDNYGQPLSEVELFETNWNATETTQNESLTKELMANDTDKDVRDDDELRTAEAENITIGCRVLHDIDLEVKANIDEESLLDTNSLFNTNIDKESLKGNEMHSQERAQILDNVTLEKNINTNLVKNIADEYTTGNLNCSYYVENTMDMLASNQRNEFSISENDNNLTKNAVEIISIENLGKIDLVPIISCGEEVNDLRILTKNINDIAELKHDKKEDYHTTVDNGKEKDCVMPEVKGNNDKVRNKNELENALTETGNIEGLSKQQQKPEPLETGNNEIVLNDKNILIKETKSELGTPHDCCLKQIVELRKSNRRHSDTTFVTKAALKAYDSHSSSLKMNEKMSSSDKSLIDKNEQLDVKASISTTIDVENISEVQTAAAVKESKLTNATNDKPMHDNPKPTLIIPYAQKRRKKSALKMEGDTSFKQMHDVEMESTHTDSCAAKTRECSVRICRLNSSKLNSFVHNSTSDISTTEVASPQLTAVRKKRKNSNAEHNDHEIIIKTQDTETEELDTATVANKILKMESKSTPKKRLSWKTKAEMKATIDVVKLRKTSLRHHAKTKTKLQETDTMMVTSIPDSNKVEDHAKETNLKQVPNVGVEQSMIGNKIITDQADVVGNKNMDIVSVPTTVVSKEENKQNQAKQQLKNFILRRRRHERSSFQRERDCTNTTPVVNKIAKKKLKSTVDKKVSNCKNDSNDPIEINLQNTLPSDGEKESTRTEPVPVSEKQQPKSLNLRRKQVMQVKRWRLGLRKAKDGNFIKSKDVETKEYNATEDKEKEIVCSTTKLVSTAIDEVSSSQKLTELEKDVEQATTSQEHNAIENKEKEIFCFSTNLQSTAIDDSVSSSQKLTEVKKIVKQATTYQGQQLKSRSLRRRKVEQMARRRPSFLRTIQCTKAIPVKGVFQKQLGEVDRNEAKNKDKESICKEKNSHSVATDIQVSMPQQFDETVWISQEVLEQLPIPQETTEQLTTEQSPQEVSETVEEPTSSSQSANQNISLDKLQVSDLNADVETAQNNAVADEMSTEDINTTVDHEQTQNLLETNKLIVRVPLTALTEEFQRMHFFTTNVQNNAENFIGAKETANVPPKSSFAAWNQNETENTAHALIKSNFCESAAAECSESAGALITYISIRATNLTGEDDVQNPNTTVCSQNESDLSEFYGFSSETDHSFEINSVGKDDEENETGTENVVLVSSQITDYINDFQTNCLTSNDVDDKSNTFPYDETNDVNTSSELKDEQNLTMAQIQTVRDINTHLSSNVSENDVESTLNGILNEIQDQHIFSSNTTLVTLESEDYHNHSAYSPLSDETSELQISQNDFLVKTMKNTLCDSADSTGPVVDPRQVEGNTEVNHPIISDAYATHFSKFVECFTEDSTQSELIGFQNDIPCFENIEMNSSTPRHNLVTPPLQMLSQSSITASSSTPLRITNSALQGAIQHGKNLEISFKNSEGNVQYLGITTSECDMADTMGLVCSTSSGAQMHTPSLNNSSSQTVSATFVNEQQANQIGKEYTVNNATMHLSQLFTEMHHPQVKVSRTQDANIASGSSQDLTAILLPDKKKQTIIPPIRSTKNSVLSKFVGSSKRLVYSKTAEAAGAGNAMLQTKKKLQFVTLPNDGQSTSSNAVTVSAPTEIGTLNIANTNLCTYAEMLQDVQWQNNAQDQQTTYYINASDLQQSNLISALVSGNISLVSSQISTTGAPQSTTSIIRTQEVHESNKQSVDANENYIEGMQNQSIMIVFPQELFKDSTTLAPVSTDYNSSQNITTLPVLNATSAQSNVVVNTPSTVNSLSTSVPPLSSSNVAEQVQSSVNLTCRFCHKRPKFTNNLEYSNHIIATHPAENPYNCPLCPMFFMRRVQRQQHVLEAHGSHRFQCAQCGQSFSMQRALDLHLQRFHVPDAPQQNLPKPRRKRMTRDQKQQQQQHQILNATPSCSSQQQQIQKLSAAQSHINPTSTWQDNASVQVNLEDVHLQVTDDDRTINEADNVRTTHNLNTPPHRILGCPECDDSFDDIADAESHVHQEHSHSPIATMPSPEQTEPDSTSTTTLRQFRKQRLSSKSFDDTPERILRSSHNCMFCEERFTNEIALRKHHQMAHNNESALPFVCSMCKRGFRMRTALQRHMDTHDSEGRPYECNVCRVRFPRPSQLTLHKLTVHFLKKPHTCNLCGKQFGTESALKTHAKFHGEKLVDCSKCDKKFFLVKDFRKHWRIHTRELFYKCDICPKSFLHYTRLSAHVKTHIPLGVYIEEDPPVLIREQKKLQQQPTVEQSATENLNSSAVDNPQTSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01486707;
90% Identity: -
80% Identity: -