Basic Information

Insect: Meiosimyza platycephala
Gene Symbol: -
Assembly: GCA_963662105.1
Location: OY759208.1:109326133-109342465[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 8.1 7.8e+02 1.7 8.2 1 19 488 506 488 509 0.87

2 8 0.0009 0.086 14.1 4.6 1 23 515 537 515 537 0.97

3 8 1.1e-05 0.0011 20.1 0.4 1 23 543 565 543 565 0.98

4 8 2.6e-05 0.0025 19.0 1.4 1 23 570 592 570 592 0.99

5 8 0.067 6.4 8.2 5.4 1 19 1203 1221 1203 1224 0.88

6 8 0.023 2.2 9.7 6.9 1 23 1230 1252 1230 1252 0.98

7 8 1.5e-05 0.0014 19.8 0.4 1 23 1258 1280 1258 1280 0.98

8 8 2.2e-05 0.0021 19.2 1.3 1 23 1285 1307 1285 1307 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	8.1	7.8e+02	1.7	8.2	1	19	488	506	488	509	0.87
2	8	0.0009	0.086	14.1	4.6	1	23	515	537	515	537	0.97
3	8	1.1e-05	0.0011	20.1	0.4	1	23	543	565	543	565	0.98
4	8	2.6e-05	0.0025	19.0	1.4	1	23	570	592	570	592	0.99
5	8	0.067	6.4	8.2	5.4	1	19	1203	1221	1203	1224	0.88
6	8	0.023	2.2	9.7	6.9	1	23	1230	1252	1230	1252	0.98
7	8	1.5e-05	0.0014	19.8	0.4	1	23	1258	1280	1258	1280	0.98
8	8	2.2e-05	0.0021	19.2	1.3	1	23	1285	1307	1285	1307	0.99

Sequence Information

Coding Sequence: ATGCCAGGTGCTTTACCAAAGCGATTTTTATATCGTTGCTCAAAATCTGATCGAAGCATTGGAATTTTGgATTTCACCAACGCAAGCGGTTTAACAGAGGAAACTCGTATTTCAATAGTTTCGCGGATTGATGAACCTTTGAATGTAGCTGGACGTAATATATACTCAAACAATAACTGTTTATCAGGAAGCATTGTCGAAAAAAATCAGATTACAACTTTTTCGACTGATCCTTTGGAAAACTTATCTGAAACCGTTAATGAAGTACAACAGCATAGCGCAATTATACCTAAAGATGAAGTTGAAATATCAGTACAAGATTTGGAGTTTGATGATcaccataaaataaaatgtggCGAAATAGTACTAGATACTTATGATAACACTTTTACATTAAATTGCTTCTTATGTTCAACGATCTGCTTGGATTTAATAACATTCTCCGAACATGTCAAAATACAACACGATAGTTTACTTGAGCAATGCATCAACATCGAAAACGAACTGGACGCTGGTACGAAAGATACCTTTGAAGTAGATAATTCAAATTTAAGGTCCACAAATGTTATTGAAGTAAATCAGGGCGTACAAAATTCTCAAAGCAGTTTAAGAGTTAGTgaagaaaattataattcagAAGAAAGTAATAATGAGagcaacaattttgaaattgaatttgataACCACGAAGGGGACGAAAGTAGTACGGATTCTGCTGCAGAATGTGATAGTGAAACCGATAATTCTGAGATCGATTTTAAAAACCATGCAGTTGTTGCTTATTTTattaaactattaaaacaaaaaccgttTATTTGGAATACGGCACATCCGCATAAAAAGAGACAAATAGGATTAACTAGCTTAATAGATCCTTTAAGCGAAAAATTCCCTAAATTAACCTTTACATATAGAAATCTTTTCACACTTTTACGTGCCATTCGTGTAGCTTTTCAGAATGAGctgaaacaaataaaagaaacgCAATGCCGAAGTATTGAATATACCCCACAGCTTTGGTTTTTCgataaactaaaatttgtagaaaatataaataacgaaGCTGTAAACATGCAGCAAAAAATTGATGGTCTGAAACAAATTGCAATGCAGATACCGCTGAATATATATGCTGATCGTGTTgattgcgaaaaaaaaacaatagaaattatAAAACATTATAAAGAACAACCCGACTTATGGAATATTGATCACCCTGACTACAGCggaaaatttcaatatacagGATTTCAAAGATTATATGGATTCTTATCTGCAACATACACAGAGATACAATTCTTAACCCAAATACAGTTCAAAAAGGCTCTGGAAGGAATGCTTAAGTGGTTTACCGCAGTAGAAGATATTCGACttcatatggaaaaattaaaccaGCCATTTAATAGCTATTATCCACGTATATATGAGGCATTAAAATTTCTACGTGGTCATGTTCCACCTTTTTGCTGTCATATTTGCGACAAACTCTTCTATCATGAGAAAATGTATGTGCATCACAAAGGACACTGTGGTGTTGCAGTGCATGAATGTCAGCACTGCTCTAAGCGTTTTTTTAACGCATTTAATCTGAATGAACACTTGTCTATACATTCTAATGAGTGTCCATTTGTTTGCACTATTTGTGGCAAAGCATTTAGAGCTAACAGATACCTTTTTGCTCATGCTCGTCGACATGAAGTTAAACCTTTTAAATGTAATATATGTCAACGCGGTTACCGCACCGCTCGCTTACTGCGTATACATCAAAAATCTCATCTGGGAATACGTGATAAGGACGAAGGAAGGCGTCGGCGGTGGACAGACAGCTGTGGCTTTGAATTGAACGATTCGTATCGAATTTGCCAAAAGCACTTTGACTTTGGTGACTTCATCGGTGCTCCATTCAACAAAAAGTGCAGGTTAATGCCAGGTGCTGTACCAACGCGATTTTTAAATCGCTGTTCAAAAACTCATCAAAGCAGTGGTGTGTTTGTTTCCTCAAAGGAAAACATTTCCTACTTTAGTATTCCTACGAACGAAGGAAGGCGTCGTCGTTGGATCGAAAGCTGTGGCTTGGAATTGAAAGCCTCATCCCGAATTTGTCAAAAACACTTCGACTACGTTGACTTCATTAATGGTCCTGGCAGCGCTAAAAAATGCAGGCTGATGCCAGGTGCATTACCTAAGCGATTCTTAGATCGCAGCCCAAAATTAAACCAATGTAGTCAAGCATCTGATTTCGCGAACGCATCCAGTTTGACAGAGGAAACTCGCTGTTCAATAGAGTCGCGCACTGATGAAGCTTTGCATGCACCTGAACCTCATAGCTCCTCAAACAATATTTGCTTACCAGTGAGCATTGACGAAAAGAATCAGATTACAACTTTTACGACTGATCCTTTGGAAAACATATCTGCTAATGAAATACCTCAGCATAACGTAATTATATCCAAAGATGAAGTTGAAATATCAGTACAAGATATAGAGTTTGATGATTACCATAAAAGAAAATGTGGTGAAATTGTACTAGATACCTATGATAACACCTTTACATTAAATTGCTTCTTATGTTCAACAATCTGTTTGGACTTAATAACATTTTCCGAACATGTTAAAAAACAACACGATAGTTTACTTGAACAATGCATCAACATCAAAAACGAACTGGACGCTACTACggaagaaatttttgaagaagATAATTCAAATTTAAGGTCCACAAATGTTATTGATGTAAATCACGACGTACAAAATTCTCAAAGCAGCTTAAGAGTTAGTGAAGAAAATTATAACTCAGTAGAAAGCAATATTGAGACCGATGATTCAGAAATTGAATTTGACAACCACGAAGAGGACGAAAGTAGTACGAACCCTTCGACAGAATGTAATTCTGAGATCGATTTTAAGAACCATGCAGTTGTTGCGCATTTTATCaaactattaaaacaaaaaccgttTATTTGGAATACGGCACATCCacatagaaaaagaaaaataggattAATTAGCTTAATAGATCCTTTAAGCGAAAAGTTCCCTAGATTAACGTTTACATATAGAAATCTTTTCACGCTTTTACGTGCTATCCGTGTAGCTTTTCAGAATGAgttgaaacaaataaaagaaacgCAACATCGAGGTATTGAATACACCCCACAGCTTTGGTTTTTCGATAAgttaaaatttgtagaaaatttaaatgacGAAGCTGTAAACTTGCAGCAAAAAATTGATGGCCTGGAAAAAATTGCAATGCAGTTACcgctaaaaatatttgttgatcGTGATGATTGTGAAAATATATCAATAGAATTTATAAATCATTATAAAGAACAACCCGACTTATGGAATATTAATCACCCTGACTACAGCggaaaatttcaatatacagGATTTCAAAGATTATATGGATTCTTATCTTCAACATACTCGGAGATAGAATGTTTACCCCAAATTCAGTTCAAAAAGGCTCTCGAAGAAATGCTAAAGTGGTTTACCACAGTGGAAGATATTCGACTACATATGGAAAAACTAAACCAACCGTTTAATAGCTACTATCCACGTATATATGAGGCACTAGAATTTCTTCGTGGACACGTTCCTCCCTTTCGCTGTCATATTTGCGACAAAATCTTCTACCATGAGAAAATGTATGTGCATCACAAAGGACACTGTGGCGTTGTAGTGCATGAATGTGAGCACTGCTCCAAGCGTTTTCTTCACGCATTTAGTCTGAAAGAACACATGTCTACACATTCTAGTGAGTGTCCCTTTGTTTGCACTATTTGTGGCAAAGCATTTAAAGCTAACAGATTACTGTTTGAGCATGTTCGTCGGCACGAAGTTAAACCTTTTAAATGCAATATATGTCAACGCGGTTACCGCACCGCTCGCTTGCTGCGTGTACATCAAAAGTCTCATCTGGGAATTCGTGATAAAGTGCAGGTACAGGTTCAGTCAGAGCAGCCAGCACGTAAAAAGGTGGAAGAAATtcccttttaa
Protein Sequence: MPGALPKRFLYRCSKSDRSIGILDFTNASGLTEETRISIVSRIDEPLNVAGRNIYSNNNCLSGSIVEKNQITTFSTDPLENLSETVNEVQQHSAIIPKDEVEISVQDLEFDDHHKIKCGEIVLDTYDNTFTLNCFLCSTICLDLITFSEHVKIQHDSLLEQCINIENELDAGTKDTFEVDNSNLRSTNVIEVNQGVQNSQSSLRVSEENYNSEESNNESNNFEIEFDNHEGDESSTDSAAECDSETDNSEIDFKNHAVVAYFIKLLKQKPFIWNTAHPHKKRQIGLTSLIDPLSEKFPKLTFTYRNLFTLLRAIRVAFQNELKQIKETQCRSIEYTPQLWFFDKLKFVENINNEAVNMQQKIDGLKQIAMQIPLNIYADRVDCEKKTIEIIKHYKEQPDLWNIDHPDYSGKFQYTGFQRLYGFLSATYTEIQFLTQIQFKKALEGMLKWFTAVEDIRLHMEKLNQPFNSYYPRIYEALKFLRGHVPPFCCHICDKLFYHEKMYVHHKGHCGVAVHECQHCSKRFFNAFNLNEHLSIHSNECPFVCTICGKAFRANRYLFAHARRHEVKPFKCNICQRGYRTARLLRIHQKSHLGIRDKDEGRRRRWTDSCGFELNDSYRICQKHFDFGDFIGAPFNKKCRLMPGAVPTRFLNRCSKTHQSSGVFVSSKENISYFSIPTNEGRRRRWIESCGLELKASSRICQKHFDYVDFINGPGSAKKCRLMPGALPKRFLDRSPKLNQCSQASDFANASSLTEETRCSIESRTDEALHAPEPHSSSNNICLPVSIDEKNQITTFTTDPLENISANEIPQHNVIISKDEVEISVQDIEFDDYHKRKCGEIVLDTYDNTFTLNCFLCSTICLDLITFSEHVKKQHDSLLEQCINIKNELDATTEEIFEEDNSNLRSTNVIDVNHDVQNSQSSLRVSEENYNSVESNIETDDSEIEFDNHEEDESSTNPSTECNSEIDFKNHAVVAHFIKLLKQKPFIWNTAHPHRKRKIGLISLIDPLSEKFPRLTFTYRNLFTLLRAIRVAFQNELKQIKETQHRGIEYTPQLWFFDKLKFVENLNDEAVNLQQKIDGLEKIAMQLPLKIFVDRDDCENISIEFINHYKEQPDLWNINHPDYSGKFQYTGFQRLYGFLSSTYSEIECLPQIQFKKALEEMLKWFTTVEDIRLHMEKLNQPFNSYYPRIYEALEFLRGHVPPFRCHICDKIFYHEKMYVHHKGHCGVVVHECEHCSKRFLHAFSLKEHMSTHSSECPFVCTICGKAFKANRLLFEHVRRHEVKPFKCNICQRGYRTARLLRVHQKSHLGIRDKVQVQVQSEQPARKKVEEIPF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00972245;
90% Identity: iTF_00972245;
80% Identity: iTF_00972245;