Mpla022640.1
Basic Information
- Insect
- Meiosimyza platycephala
- Gene Symbol
- ZBTB41
- Assembly
- GCA_963662105.1
- Location
- OY759211.1:7682732-7687750[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 1 1e+02 4.5 6.0 2 23 170 192 169 192 0.96 2 17 0.00029 0.028 15.7 1.9 1 23 224 246 224 246 0.98 3 17 0.0017 0.16 13.3 1.4 1 23 254 276 254 276 0.98 4 17 0.0069 0.66 11.4 0.2 3 23 315 335 314 335 0.97 5 17 5.3e-05 0.0051 18.0 0.3 2 23 343 365 342 365 0.96 6 17 4.5 4.3e+02 2.5 0.4 3 23 375 396 373 396 0.90 7 17 2.8e-06 0.00027 22.0 1.6 1 23 402 424 402 424 0.96 8 17 2.8e-05 0.0027 18.9 4.6 1 23 430 453 430 453 0.98 9 17 0.00059 0.056 14.7 0.1 1 23 677 699 677 699 0.99 10 17 0.00079 0.076 14.3 1.2 1 23 707 729 707 729 0.98 11 17 0.014 1.4 10.4 0.7 2 23 738 760 738 760 0.93 12 17 0.0091 0.87 11.0 0.3 2 23 767 788 766 788 0.96 13 17 0.0051 0.49 11.8 0.1 2 23 799 820 798 820 0.96 14 17 0.038 3.7 9.0 0.3 2 23 826 847 826 847 0.91 15 17 1.9 1.8e+02 3.7 1.0 3 23 853 874 851 874 0.92 16 17 0.00012 0.011 16.9 0.9 1 23 880 902 880 902 0.96 17 17 0.00012 0.011 16.9 3.4 1 23 908 931 908 931 0.96
Sequence Information
- Coding Sequence
- ATGAGaTTGATCGAAACGTTCATCGTACCTACACAATTTGCTGTAATTGTGGAAAGGGCGCTGAAAGGAGCTACGATCCGTGATACCGATCCACCTGGAGTGCTCTGCCAAGAGTTAAAACTTGAAGATGATATTGTTAAGCTTGAACCAAATAATATTGATTATATAAACGCTGAGAGTCCACAACCAGCTCCGGAAAATCCAAATAAAAGACCCAATGAACTCTTGAATTCACAAAATGTTCAAACCGCACCAAATTTACACACCCAGCATGAAGAGTCACTTCAATTGGAAACTGAAGCTGCGGTTGAAACTTTGAATGTTATTATGGATAATGATTTTGAACAGCACATGGCTTCAGATAGTGAggaatatgtaaataaatatttttccgtTGAGTCCGCTTGTTCCAAGGTTCAAAAAAGGAAAACAGCAAAATACGTTCAGTCAGTAAGATTTCAAGTTACAGAAAATCCTGATGAATTCctgtcgaaaaattttgaattaacttGTTGCCTGTGCCACATCACTCTGGAACATTTTTCCTCtttgataaaacattttcgCTCAGAGCACAACATTCGTGGATATGTTacatgttgtaaaaaaaattttttaaagcgatGTCATCTTGTCGATCATGTTCAAACGCATCTAAATCCAACTTTCTTTAAATGCTCGGTATGCGATAAAGTTGCAGCTGATCGTCATTGTCTGGAAATTCACATGCAAAATCACGAAAAGAAACCTGAACGTACTTTTCAATGTGCGACCTGTTCGAAACGCTACTTTAGCCGGCCGAGTCTTTTGCGTCACTTGCAATTACACATTCCTAAGGAGGAAAAAAAAGCTAAATGCGCTCAATGTGAAAAGACGTTTCTTACAACTAACATCATGGATCAACACTTTAAAGTTGTCCATTTAAATGTATACTCAAAAATATGTGATATTTGCGGAAAATTTATTAGAGGGCGTGAATTACTTCGGCTTCATCAACAAGAACAtggagtaataaaaactttagtaGAATGTGAACTTTGTGGTTCGAAATTTAGAAACAAGTACGGACTCTCGCGGCATATAAAAAGTGCTCATTCAGAGAAAAATCCTACGCCACAAATTTGTACTATATGTTCGAGAGTTTCACCTTCAGTAAGTGCACATCGAGagcatataaaatatatgcatCAACTGGAACGAAAACATGCTTGTCGAATATGTGACAAGGTATTCAAAACAACAAAGGACTTAAGggTGCATATGATAACACATACTGGTGAAGCTTTATATAAATGCACGTATTGCCCAAAATCGTTTTGTTCATCGTCTGGAATGTATTCACATCGCAGAAGAGTTCATCGCAAAGAATTGAATGCTCAACAACGATGTAGATTTGTAGTTTTAGCTGATAGTAATACGACAATTGATCCAAACGTTCATCATACCTACACAATTTGCAGTAACTGCTGCCGAATTTTATGTAACTTTCATGAGCTCTACCTAATTGTGGAAAGTGCGCTGAAAGGAGCTACAATCCGTGAAACCGATCCACCTGAAGTGCTCTGCCAAGAGTTTAAACTTGAAGATGATATTCTTAAACTTGATGATTGCATAAACGCTGAGAGTCCCCAACCAGCTCccaaaaatccaaataaaagaCCCAGTGAACACCTGAATGCACAAAATATTCACACCCAGCATGAAGTGTCACTTCAATTGGAAAATGAAATCGTTGTCAAAGATGAAATCACAACTGAAGCTGCAGTTGAAGCTTTGAATATTGCTAATGATGATGATTTTGAGCAGCGCATGGCCTTAGATAGTGGGGAATATGAAAATGAATATTTATCCGGAGAATCCGCTTGTTCCATAGTTCAAAAAAGTATAACACATAAGGGCAAACGGTCGACGTGTAAAACCGAATCTAGAAAATCCCCTACTTCCGTTTTAGAAAAATACGTTCAATCACTAAAATTCGAAGGCATTGAAAATTCTGATGAATTCTTCAAATGTTCCTCAGATGAATTCTTTAAATGCTCCATATGCAATAAGGTTGCCTCAGATGGGCTAGGTTTGAAAGATCATATGCAAACTCACAAAGAGAAACCTGAACGTACTTTTCAATGTGAGATCTGTTCGAAACGATACTTTAGACGTGCGATTCTTAGGCGTCATTTGCAGGTACACGTGCCCGATGAGGAAAAAAAAGCTAAGTGCCCTAAATGTGAAAAATCATTTCCTACAACTTACATTATGAAAGagcacttaaaaaatatccatttAAATGCATACTCCAAAGTGTGTGAGACTTGTGGAAAATCAATTAAAGGCCGCGAGGCATTTCGGCTTCATCAACAGGAACACGCGGGAGGTCCAAAAGTACCAAAACATGTAACATGTGAAATTTGTGGTTTGGAGCTTACAAAGTATGCCCTCTCGAGGCATATGAAAATTGTTCATTCAGAGAAAAATGCTGAATGTGAACTTTGTGGTTTGAAGTTTACAAAGGATGGTCTTTCGAGACATAATGAAAGTGTTCATTCAGAGAAACAAATTTGCACTATTTGTACGAAAGTTTCACCAACAGTAAGGTCACATCGAGAGCATATGAAATATGTGCATAACCTGGAACGAAAACATGCTTGTCCAATGTGTGACAAGGCgttcaaaacaacaaaagacAGAAGGgTGCATATTGCAACACATACTGGTGCAGCTTTATGTAAATGCCCATATTGCCCAAAAACGTATAATTCATCATCTGCAATGTATTCACATCGCAGAAAAATGCATCTCAAAGAAATGGAAGCTAATGCAACAACGATGTAA
- Protein Sequence
- MRLIETFIVPTQFAVIVERALKGATIRDTDPPGVLCQELKLEDDIVKLEPNNIDYINAESPQPAPENPNKRPNELLNSQNVQTAPNLHTQHEESLQLETEAAVETLNVIMDNDFEQHMASDSEEYVNKYFSVESACSKVQKRKTAKYVQSVRFQVTENPDEFLSKNFELTCCLCHITLEHFSSLIKHFRSEHNIRGYVTCCKKNFLKRCHLVDHVQTHLNPTFFKCSVCDKVAADRHCLEIHMQNHEKKPERTFQCATCSKRYFSRPSLLRHLQLHIPKEEKKAKCAQCEKTFLTTNIMDQHFKVVHLNVYSKICDICGKFIRGRELLRLHQQEHGVIKTLVECELCGSKFRNKYGLSRHIKSAHSEKNPTPQICTICSRVSPSVSAHREHIKYMHQLERKHACRICDKVFKTTKDLRVHMITHTGEALYKCTYCPKSFCSSSGMYSHRRRVHRKELNAQQRCRFVVLADSNTTIDPNVHHTYTICSNCCRILCNFHELYLIVESALKGATIRETDPPEVLCQEFKLEDDILKLDDCINAESPQPAPKNPNKRPSEHLNAQNIHTQHEVSLQLENEIVVKDEITTEAAVEALNIANDDDFEQRMALDSGEYENEYLSGESACSIVQKSITHKGKRSTCKTESRKSPTSVLEKYVQSLKFEGIENSDEFFKCSSDEFFKCSICNKVASDGLGLKDHMQTHKEKPERTFQCEICSKRYFRRAILRRHLQVHVPDEEKKAKCPKCEKSFPTTYIMKEHLKNIHLNAYSKVCETCGKSIKGREAFRLHQQEHAGGPKVPKHVTCEICGLELTKYALSRHMKIVHSEKNAECELCGLKFTKDGLSRHNESVHSEKQICTICTKVSPTVRSHREHMKYVHNLERKHACPMCDKAFKTTKDRRVHIATHTGAALCKCPYCPKTYNSSSAMYSHRRKMHLKEMEANATTM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -